RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 IGKV3OR2-268A0A0C4DH90 116 aa8.6□□□□□ -1.03
TP53-219ENST00000610538 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
TP53-219ENST00000610538 F8W1H4 67 aa8.6□□□□□ -1.03
TP53-219ENST00000610538 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
TP53-219ENST00000610538 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
TP53-219ENST00000610538 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
TP53-219ENST00000610538 J3QR89 54 aa8.59□□□□□ -1.03
TP53-219ENST00000610538 Q6ZTC4 211 aa8.59□□□□□ -1.03
TP53-219ENST00000610538 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
TP53-219ENST00000610538 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
TP53-219ENST00000610538 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
TP53-219ENST00000610538 AMELXQ99217 191 aa8.58□□□□□ -1.04
TP53-219ENST00000610538 PAPPA-AS1Q5QFB9 102 aa8.58□□□□□ -1.04
TP53-219ENST00000610538 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
TP53-219ENST00000610538 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
TP53-219ENST00000610538 HUWE1Q7Z6Z7 4374 aaKnown RBP8.57□□□□□ -1.04
TP53-219ENST00000610538 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
TP53-219ENST00000610538 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
TP53-219ENST00000610538 Q8N3U1 123 aa8.56□□□□□ -1.04
TP53-219ENST00000610538 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
TP53-219ENST00000610538 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
TP53-219ENST00000610538 COX6A2Q02221 97 aa8.55□□□□□ -1.04
TP53-219ENST00000610538 WFDC2Q14508 124 aa8.55□□□□□ -1.04
TP53-219ENST00000610538 SIGMAR1Q99720 223 aa8.55□□□□□ -1.04
TP53-219ENST00000610538 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
TP53-219ENST00000610538 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
TP53-219ENST00000610538 TRAV8-3A0A0A6YYJ7 113 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 H3BMG7 143 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 CLPSL2Q6UWE3 100 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 C11orf45Q8TAV5 145 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
TP53-219ENST00000610538 UBE2D1P51668 147 aa8.53□□□□□ -1.04
TP53-219ENST00000610538 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
TP53-219ENST00000610538 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
TP53-219ENST00000610538 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
TP53-219ENST00000610538 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
TP53-219ENST00000610538 TIMM21Q9BVV7 248 aa8.53□□□□□ -1.04
TP53-219ENST00000610538 CDKN2A-AS1Q9UH64 79 aa8.53□□□□□ -1.04
TP53-219ENST00000610538 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
TP53-219ENST00000610538 MEGF8Q7Z7M0 2845 aa8.52□□□□□ -1.05
TP53-219ENST00000610538 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
TP53-219ENST00000610538 HERVK_113P61574 105 aa8.52□□□□□ -1.05
TP53-219ENST00000610538 MRPL23Q16540 153 aaKnown RBP8.52□□□□□ -1.05
TP53-219ENST00000610538 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
TP53-219ENST00000610538 SPATA25Q9BR10 227 aa8.52□□□□□ -1.05
TP53-219ENST00000610538 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
TP53-219ENST00000610538 TMEM223A0PJW6 202 aa8.51□□□□□ -1.05
TP53-219ENST00000610538 ETDBQ3ZM63 59 aa8.51□□□□□ -1.05
TP53-219ENST00000610538 KPRPQ5T749 579 aaPredicted RBP8.51□□□□□ -1.05
TP53-219ENST00000610538 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
TP53-219ENST00000610538 ICOSQ9Y6W8 199 aa8.51□□□□□ -1.05
TP53-219ENST00000610538 SCGB1D4Q6XE38 83 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 C11orf68Q9H3H3 251 aaKnown RBP8.5□□□□□ -1.05
TP53-219ENST00000610538 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 J3QQQ9 107 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 PRO0461Q9UI25 63 aa8.5□□□□□ -1.05
TP53-219ENST00000610538 SRSF9Q13242 221 aaKnown RBP eCLIP8.49□□□□□ -1.05
TP53-219ENST00000610538 DNAH9Q9NYC9 4486 aa8.49□□□□□ -1.05
TP53-219ENST00000610538 IGHV3-30-3P0DP02 117 aa8.48□□□□□ -1.05
TP53-219ENST00000610538 MTURNQ8N3F0 131 aa8.48□□□□□ -1.05
TP53-219ENST00000610538 H7C423 109 aa8.48□□□□□ -1.05
TP53-219ENST00000610538 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
TP53-219ENST00000610538 LYSTQ99698 3801 aa8.48□□□□□ -1.05
TP53-219ENST00000610538 FAM229AH3BQW9 127 aa8.47□□□□□ -1.05
TP53-219ENST00000610538 LYPD5Q6UWN5 251 aa8.47□□□□□ -1.05
TP53-219ENST00000610538 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
TP53-219ENST00000610538 APOMO95445 188 aa8.47□□□□□ -1.05
TP53-219ENST00000610538 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
TP53-219ENST00000610538 LYRM7Q5U5X0 104 aa8.47□□□□□ -1.05
TP53-219ENST00000610538 PRKDCP78527 4128 aaKnown RBP8.47□□□□□ -1.05
TP53-219ENST00000610538 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.05
TP53-219ENST00000610538 XCL1P47992 114 aa8.46□□□□□ -1.06
TP53-219ENST00000610538 HERVK_113P63121 156 aa8.46□□□□□ -1.06
TP53-219ENST00000610538 LEPROTO15243 131 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 A0A1B0GV72 72 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 PSMB2P49721 201 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
TP53-219ENST00000610538 TSPAN13O95857 204 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 IGHV3-30P01768 117 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 IGHV3-30-5P0DP03 117 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
TP53-219ENST00000610538 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 A0A1B0GUV1 79 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 FOXI1Q12951 378 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 LELP1Q5T871 98 aa8.44□□□□□ -1.06
TP53-219ENST00000610538 ESRGQ1W209 222 aa8.43□□□□□ -1.06
TP53-219ENST00000610538 PLA2G2DQ9UNK4 145 aa8.43□□□□□ -1.06
TP53-219ENST00000610538 WFDC10BQ8IUB3 73 aa8.43□□□□□ -1.06
TP53-219ENST00000610538 C10orf126Q8N4M7 172 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms