RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
CHMP4A-211ENST00000609024 ZNF861PO60384 105 aa10.32□□□□□ -0.76
CHMP4A-211ENST00000609024 CEBPGP53567 150 aa10.32□□□□□ -0.76
CHMP4A-211ENST00000609024 RIGQ13278 110 aa10.32□□□□□ -0.76
CHMP4A-211ENST00000609024 LCE2AQ5TA79 106 aaPredicted RBP10.32□□□□□ -0.76
CHMP4A-211ENST00000609024 BATF3Q9NR55 127 aa10.32□□□□□ -0.76
CHMP4A-211ENST00000609024 TGIF2-C20orf24A0A0A6YYL0 155 aa10.31□□□□□ -0.76
CHMP4A-211ENST00000609024 PACRGQ96M98 296 aaPredicted RBP10.31□□□□□ -0.76
CHMP4A-211ENST00000609024 IFITM10A6NMD0 228 aa10.3□□□□□ -0.76
CHMP4A-211ENST00000609024 TCAPO15273 167 aa10.3□□□□□ -0.76
CHMP4A-211ENST00000609024 HBBP68871 147 aa10.3□□□□□ -0.76
CHMP4A-211ENST00000609024 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
CHMP4A-211ENST00000609024 TRBV30A0A0K0K1B3 111 aa10.28□□□□□ -0.76
CHMP4A-211ENST00000609024 TMEM250H0YL14 139 aa10.28□□□□□ -0.76
CHMP4A-211ENST00000609024 NUPR1O60356 82 aa10.28□□□□□ -0.76
CHMP4A-211ENST00000609024 NRACQ8N912 160 aa10.28□□□□□ -0.76
CHMP4A-211ENST00000609024 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
CHMP4A-211ENST00000609024 NDUFC2-KCTD14E9PQ53 114 aa10.27□□□□□ -0.77
CHMP4A-211ENST00000609024 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
CHMP4A-211ENST00000609024 CRYGAP11844 174 aa10.26□□□□□ -0.77
CHMP4A-211ENST00000609024 RPL39P62891 51 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-211ENST00000609024 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
CHMP4A-211ENST00000609024 CDIP1Q9H305 208 aa10.26□□□□□ -0.77
CHMP4A-211ENST00000609024 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
CHMP4A-211ENST00000609024 C20orf78Q9BR46 151 aa10.25□□□□□ -0.77
CHMP4A-211ENST00000609024 RPL28P46779 137 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-211ENST00000609024 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-211ENST00000609024 C9orf129Q5T035 196 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-211ENST00000609024 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
CHMP4A-211ENST00000609024 LINC00862A6NCI5 91 aa10.23□□□□□ -0.77
CHMP4A-211ENST00000609024 CKS2P33552 79 aa10.23□□□□□ -0.77
CHMP4A-211ENST00000609024 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
CHMP4A-211ENST00000609024 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
CHMP4A-211ENST00000609024 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
CHMP4A-211ENST00000609024 PRSS2P07478 247 aa10.22□□□□□ -0.77
CHMP4A-211ENST00000609024 IFI27P40305 119 aaPredicted RBP10.22□□□□□ -0.77
CHMP4A-211ENST00000609024 MRPL51Q4U2R6 128 aaKnown RBP10.22□□□□□ -0.77
CHMP4A-211ENST00000609024 OSTCQ9NRP0 149 aa10.22□□□□□ -0.77
CHMP4A-211ENST00000609024 KIAA0087Q14695 138 aa10.21□□□□□ -0.77
CHMP4A-211ENST00000609024 FAM104BQ5XKR9 115 aa10.21□□□□□ -0.77
CHMP4A-211ENST00000609024 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.77
CHMP4A-211ENST00000609024 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
CHMP4A-211ENST00000609024 A0A087X002 238 aa10.2□□□□□ -0.78
CHMP4A-211ENST00000609024 CKS1BP61024 79 aa10.2□□□□□ -0.78
CHMP4A-211ENST00000609024 LINC01551Q86U37 167 aa10.2□□□□□ -0.78
CHMP4A-211ENST00000609024 ZNF727A8MUV8 499 aa10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 TNFRSF6BO95407 300 aa10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 BLOC1S1P78537 153 aa10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 LINC00469Q8N7U9 141 aa10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 RETNLBQ9BQ08 111 aa10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 SMIM2Q9BVW6 85 aa10.19□□□□□ -0.78
CHMP4A-211ENST00000609024 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
CHMP4A-211ENST00000609024 RAB5AP20339 215 aa10.18□□□□□ -0.78
CHMP4A-211ENST00000609024 EIF5A2Q9GZV4 153 aaKnown RBP10.18□□□□□ -0.78
CHMP4A-211ENST00000609024 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
CHMP4A-211ENST00000609024 BCE1O60756 84 aa10.17□□□□□ -0.78
CHMP4A-211ENST00000609024 C6orf226Q5I0X4 101 aa10.17□□□□□ -0.78
CHMP4A-211ENST00000609024 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
CHMP4A-211ENST00000609024 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
CHMP4A-211ENST00000609024 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
CHMP4A-211ENST00000609024 C2orf88Q9BSF0 95 aa10.16□□□□□ -0.78
CHMP4A-211ENST00000609024 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
CHMP4A-211ENST00000609024 A0A1B0GW15 77 aa10.15□□□□□ -0.78
CHMP4A-211ENST00000609024 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.78
CHMP4A-211ENST00000609024 LINC00304Q8N9R0 145 aa10.15□□□□□ -0.78
CHMP4A-211ENST00000609024 TMEM141Q96I45 108 aa10.15□□□□□ -0.78
CHMP4A-211ENST00000609024 V9GYV3 84 aa10.15□□□□□ -0.78
CHMP4A-211ENST00000609024 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 D6R8Y8 96 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 F8W036 122 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 Q6ZN92 141 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 LINC01561Q8N1V8 128 aa10.14□□□□□ -0.79
CHMP4A-211ENST00000609024 S100A8P05109 93 aa10.13□□□□□ -0.79
CHMP4A-211ENST00000609024 TP73-AS1Q9UF72 201 aa10.13□□□□□ -0.79
CHMP4A-211ENST00000609024 UBE2AP49459 152 aa10.12□□□□□ -0.79
CHMP4A-211ENST00000609024 FAM74A3Q4VXF1 159 aa10.12□□□□□ -0.79
CHMP4A-211ENST00000609024 ALKBH7Q9BT30 221 aaPredicted RBP10.12□□□□□ -0.79
CHMP4A-211ENST00000609024 ANAPC11Q9NYG5 84 aa10.12□□□□□ -0.79
CHMP4A-211ENST00000609024 PYGO1Q9Y3Y4 419 aa10.12□□□□□ -0.79
CHMP4A-211ENST00000609024 IGLV4-3A0A075B6K6 122 aa10.11□□□□□ -0.79
CHMP4A-211ENST00000609024 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
CHMP4A-211ENST00000609024 RPL37AP8A6NKH3 93 aa10.1□□□□□ -0.79
CHMP4A-211ENST00000609024 NPYP01303 97 aa10.1□□□□□ -0.79
CHMP4A-211ENST00000609024 PPBPP02775 128 aa10.1□□□□□ -0.79
CHMP4A-211ENST00000609024 ALKAL2Q6UX46 152 aa10.1□□□□□ -0.79
CHMP4A-211ENST00000609024 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
CHMP4A-211ENST00000609024 Q8IZM0 81 aa10.09□□□□□ -0.79
CHMP4A-211ENST00000609024 ADIRFQ15847 76 aa10.08□□□□□ -0.8
CHMP4A-211ENST00000609024 VCX2Q9H322 139 aa10.08□□□□□ -0.8
CHMP4A-211ENST00000609024 SMIM27A0A1W2PRY6 76 aa10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 F8VRH5 84 aa10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 LINC01547P58512 204 aaPredicted RBP10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 TCTE3Q8IZS6 198 aa10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 ORMDL3Q8N138 153 aa10.07□□□□□ -0.8
CHMP4A-211ENST00000609024 LINC00167Q96N53 147 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms