RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 PACRGQ96M98 296 aaPredicted RBP6.22□□□□□ -1.41
SQSTM1P1-201ENST00000603451 OPRPNQ99935 248 aaPredicted RBP6.22□□□□□ -1.41
SQSTM1P1-201ENST00000603451 A0A087WZ39 114 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 C16orf90A8MZG2 172 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BKO60814 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BJP06899 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 MALP21145 153 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BOP23527 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BBP33778 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BDP58876 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 KRTAP10-2P60368 255 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 SNRPEP62304 92 aaKnown RBP6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BCP62807 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 PMVKQ15126 192 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST2H2BEQ16778 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 LINC00242Q5T6M2 205 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BHQ93079 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BNQ99877 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIST1H2BMQ99879 126 aa6.21□□□□□ -1.42
SQSTM1P1-201ENST00000603451 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 hDV102S1A0JD36 115 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 LECT2O14960 151 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 SERF1AO75920 110 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 PRSS1P07477 247 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 COA6Q5JTJ3 125 aaKnown RBP6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
SQSTM1P1-201ENST00000603451 TRAV12-1A0A0B4J245 112 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 GCSHP23434 173 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 LINC00310P59036 64 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 C2orf48Q96LS8 159 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 CST9LQ9H4G1 147 aa6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 GEMIN7Q9H840 131 aaKnown RBP6.19□□□□□ -1.42
SQSTM1P1-201ENST00000603451 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 CDK2AP2O75956 126 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 LEPROTL1O95214 131 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 PMCHL1Q16048 86 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 C9orf163Q8N9P6 203 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HSPB8Q9UJY1 196 aa6.18□□□□□ -1.42
SQSTM1P1-201ENST00000603451 DNAH11Q96DT5 4516 aa6.17□□□□□ -1.42
SQSTM1P1-201ENST00000603451 H3BRM9 83 aa6.17□□□□□ -1.42
SQSTM1P1-201ENST00000603451 IGLC3P0DOY3 106 aa6.17□□□□□ -1.42
SQSTM1P1-201ENST00000603451 AKR1D1P51857 326 aa6.17□□□□□ -1.42
SQSTM1P1-201ENST00000603451 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 SMIM6P0DI80 62 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 NDUFA6P56556 154 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 SPAG11BQ08648 103 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 Q6ZSA8 131 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 C5orf38Q86SI9 138 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 Q8IZM0 81 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 LINC00469Q8N7U9 141 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 ORAOV1Q8WV07 137 aa6.16□□□□□ -1.42
SQSTM1P1-201ENST00000603451 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 A0A0J9YXV3 536 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 F8VRH5 84 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 CXCL5P42830 114 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 SYCNQ0VAF6 134 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 HIGD2BQ4VC39 106 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 SFTA2Q6UW10 78 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 CARD19Q96LW7 228 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 CHAC1Q9BUX1 264 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 CDKN2A-AS1Q9UH64 79 aa6.15□□□□□ -1.42
SQSTM1P1-201ENST00000603451 NDUFA1O15239 70 aa6.14□□□□□ -1.43
SQSTM1P1-201ENST00000603451 COX6A2Q02221 97 aa6.14□□□□□ -1.43
SQSTM1P1-201ENST00000603451 ZC2HC1BQ5TFG8 222 aa6.14□□□□□ -1.43
SQSTM1P1-201ENST00000603451 CAMK2N2Q96S95 79 aa6.14□□□□□ -1.43
SQSTM1P1-201ENST00000603451 MRPL35Q9NZE8 188 aaKnown RBP6.14□□□□□ -1.43
SQSTM1P1-201ENST00000603451 CHTOPQ9Y3Y2 248 aaKnown RBP6.14□□□□□ -1.43
SQSTM1P1-201ENST00000603451 TRBV30A0A0K0K1B3 111 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 SMIM1B2RUZ4 78 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 PRSS2P07478 247 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 PLNP26678 52 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 S100A2P29034 98 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 HIST3H2BBQ8N257 126 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 C12orf57Q99622 126 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 MAP1LC3CQ9BXW4 147 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 LINC00474Q9P2X8 69 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
SQSTM1P1-201ENST00000603451 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 NUPR1O60356 82 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 SLPIP03973 132 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 ZNF22P17026 224 aaPredicted RBP6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 KIAA0087Q14695 138 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 ODF1Q14990 250 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 SDIM1Q6ZPB5 146 aa6.12□□□□□ -1.43
SQSTM1P1-201ENST00000603451 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
SQSTM1P1-201ENST00000603451 CKS1BP61024 79 aa6.11□□□□□ -1.43
SQSTM1P1-201ENST00000603451 S100A12P80511 92 aa6.11□□□□□ -1.43
SQSTM1P1-201ENST00000603451 DYNC1H1Q14204 4646 aaKnown RBP6.1□□□□□ -1.43
SQSTM1P1-201ENST00000603451 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
SQSTM1P1-201ENST00000603451 TLX1NBP0CAT3 122 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms