RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 IGLV4-3A0A075B6K6 122 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 IGHV3-72A0A0B4J1Y9 119 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 IGHV3-35A0A0C4DH35 117 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 SAA2P0DJI9 122 aaPredicted RBP3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 CCL3P10147 92 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 FAM104AQ969W3 186 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 DEFB126Q9BYW3 111 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 C14orf132Q9NPU4 83 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 NDUFA4L2Q9NRX3 87 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 CHD6Q8TD26 2715 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 IGHV3-74A0A0B4J1X5 117 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 C3orf84H3BNL1 204 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 LEAP2Q969E1 77 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 ACACBO00763 2458 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 MRPL33O75394 65 aaKnown RBP3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 SAA1P0DJI8 122 aaPredicted RBP3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 ZNF833PQ6ZTB9 187 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 TMEM254Q8TBM7 123 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 DCHS1Q96JQ0 3298 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 CEP250Q9BV73 2442 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 SPTBN2O15020 2390 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 C16orf90A8MZG2 172 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 TNCP24821 2201 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 MYO15AQ9UKN7 3530 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 A8MU10 97 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 WT1-ASQ06250 92 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 C15orf32Q32M92 178 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 WDFY3Q8IZQ1 3526 aa3.43□□□□□ -1.86
SPTBN1-206ENST00000602898 A8MWP4 228 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 PPP1R17O96001 155 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 PRR4Q16378 134 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 LINC01560Q8TB33 94 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 UBL5Q9BZL1 73 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 SMAD5-AS1Q9Y6J3 95 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 C10orf55Q5SWW7 151 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 WFDC9Q8NEX5 89 aa3.42□□□□□ -1.86
SPTBN1-206ENST00000602898 ARFGEF3Q5TH69 2177 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 IGHV4-30-2A0A087WSY4 118 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 IGKV3D-15A0A087WSY6 115 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 GNRH2O43555 120 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 IGHV1-69P01742 117 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 SLPIP03973 132 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 LYZP61626 148 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 LPAL2Q16609 132 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 Q5VV11 94 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 ZFAND2AQ8N6M9 145 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 CYP4F30PQ9H0H9 118 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 PDE6HQ13956 83 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 LYPD2Q6UXB3 125 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 CNEP1R1Q8N9A8 125 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 NDUFA12Q9UI09 145 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 VPS13AQ96RL7 3174 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 ATRXP46100 2492 aa3.41□□□□□ -1.86
SPTBN1-206ENST00000602898 TRAV10A0A0B4J240 114 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 HCG22E2RYF7 251 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 PRB1P04280 392 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 CTSGP08311 255 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 DEFB133Q30KQ1 61 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 Q8NBF4 154 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 ZFHX3Q15911 3703 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 CHD8Q9HCK8 2581 aa3.4□□□□□ -1.86
SPTBN1-206ENST00000602898 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV3-21A0A0B4J1V1 117 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 RPL27AP46776 148 aaKnown RBP3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 NREPQ16612 68 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 KIF25-AS1Q9Y6Z4 181 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 DMDP11532 3685 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 DNAJC13O75165 2243 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 MYO18BQ8IUG5 2567 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 DMXL1Q9Y485 3027 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 C1orf134Q5TEV5 83 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 HCP5Q6MZN7 132 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 LINC01006Q8NI28 216 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 TMEM167AQ8TBQ9 72 aa3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.87
SPTBN1-206ENST00000602898 PI4KAP42356 2102 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 PRR14LQ5THK1 2151 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV3-11P01762 117 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 IGHV3-30-3P0DP02 117 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 SPANXN1Q5VSR9 72 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 C1orf64Q8NEQ6 169 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 ZNRD1Q9P1U0 126 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 DPM3Q9P2X0 92 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 WDR87Q6ZQQ6 2873 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 IGKV2-40A0A087WW87 121 aaPredicted RBP3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 IGKV2D-40P01614 121 aaPredicted RBP3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 C9orf129Q5T035 196 aaKnown RBP3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 Q8N814 137 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 Q8TAT8 98 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 C7orf33Q8WU49 177 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 CAMK2N2Q96S95 79 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 NAV3Q8IVL0 2385 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 ABCA4P78363 2273 aa3.39□□□□□ -1.87
SPTBN1-206ENST00000602898 MALRD1Q5VYJ5 2156 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms