RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
USE1-210ENST00000601662 COX11Q9Y6N1 276 aa9.69□□□□□ -0.86
USE1-210ENST00000601662 C20orf202A1L168 122 aa9.68□□□□□ -0.86
USE1-210ENST00000601662 OR10D4PQ8NGN7 298 aa9.68□□□□□ -0.86
USE1-210ENST00000601662 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
USE1-210ENST00000601662 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
USE1-210ENST00000601662 F8VRH5 84 aa9.67□□□□□ -0.86
USE1-210ENST00000601662 HERVK_113P63121 156 aa9.67□□□□□ -0.86
USE1-210ENST00000601662 C1orf43Q9BWL3 253 aa9.67□□□□□ -0.86
USE1-210ENST00000601662 GEMIN7Q9H840 131 aaKnown RBP9.67□□□□□ -0.86
USE1-210ENST00000601662 ODF1Q14990 250 aa9.66□□□□□ -0.86
USE1-210ENST00000601662 LINC00242Q5T6M2 205 aa9.66□□□□□ -0.86
USE1-210ENST00000601662 CD164L2Q6UWJ8 174 aa9.66□□□□□ -0.86
USE1-210ENST00000601662 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
USE1-210ENST00000601662 Q9HAA7 133 aa9.66□□□□□ -0.86
USE1-210ENST00000601662 PKD1P98161 4303 aa9.66□□□□□ -0.86
USE1-210ENST00000601662 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
USE1-210ENST00000601662 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
USE1-210ENST00000601662 IGLC3P0DOY3 106 aa9.65□□□□□ -0.86
USE1-210ENST00000601662 PLNP26678 52 aa9.65□□□□□ -0.86
USE1-210ENST00000601662 LINC01545Q5VT33 79 aa9.65□□□□□ -0.86
USE1-210ENST00000601662 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.86
USE1-210ENST00000601662 IGLV10-54A0A075B6I4 117 aa9.64□□□□□ -0.87
USE1-210ENST00000601662 DPM2O94777 84 aa9.64□□□□□ -0.87
USE1-210ENST00000601662 XCL1P47992 114 aa9.64□□□□□ -0.87
USE1-210ENST00000601662 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
USE1-210ENST00000601662 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 DYNC1H1Q14204 4646 aaKnown RBP9.62□□□□□ -0.87
USE1-210ENST00000601662 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 IGHV3OR16-9A0A0B4J2B5 98 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 GAGE12HA6NDE8 117 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 H3BRM9 83 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 IGKCP01834 107 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 Q6ZRN7 208 aaPredicted RBP9.62□□□□□ -0.87
USE1-210ENST00000601662 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 CHAC1Q9BUX1 264 aa9.62□□□□□ -0.87
USE1-210ENST00000601662 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
USE1-210ENST00000601662 COX7A2LO14548 114 aa9.61□□□□□ -0.87
USE1-210ENST00000601662 SCGB1D1O95968 90 aa9.61□□□□□ -0.87
USE1-210ENST00000601662 COX6A2Q02221 97 aa9.61□□□□□ -0.87
USE1-210ENST00000601662 FOXI1Q12951 378 aa9.61□□□□□ -0.87
USE1-210ENST00000601662 LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
USE1-210ENST00000601662 A0A087WZ39 114 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 C11orf86A6NJI1 115 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 C16orf90A8MZG2 172 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 PSCAO43653 123 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
USE1-210ENST00000601662 TMEM170BQ5T4T1 132 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
USE1-210ENST00000601662 APOMO95445 188 aa9.59□□□□□ -0.87
USE1-210ENST00000601662 MALP21145 153 aa9.59□□□□□ -0.87
USE1-210ENST00000601662 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
USE1-210ENST00000601662 C5orf38Q86SI9 138 aa9.59□□□□□ -0.87
USE1-210ENST00000601662 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
USE1-210ENST00000601662 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
USE1-210ENST00000601662 EREGO14944 169 aa9.57□□□□□ -0.88
USE1-210ENST00000601662 KRTAP10-2P60368 255 aa9.57□□□□□ -0.88
USE1-210ENST00000601662 HERVK_113P61574 105 aa9.57□□□□□ -0.88
USE1-210ENST00000601662 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
USE1-210ENST00000601662 IGHV1-58A0A0C4DH39 117 aa9.56□□□□□ -0.88
USE1-210ENST00000601662 LOC105371267A0A1B0GV96 52 aa9.56□□□□□ -0.88
USE1-210ENST00000601662 A0A087WTM6 91 aa9.55□□□□□ -0.88
USE1-210ENST00000601662 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
USE1-210ENST00000601662 IGHV3-64A0A075B6Q5 118 aa9.54□□□□□ -0.88
USE1-210ENST00000601662 HSBP1L1C9JCN9 74 aa9.54□□□□□ -0.88
USE1-210ENST00000601662 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
USE1-210ENST00000601662 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
USE1-210ENST00000601662 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
USE1-210ENST00000601662 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
USE1-210ENST00000601662 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
USE1-210ENST00000601662 PYY3Q5JQD4 70 aa9.52□□□□□ -0.89
USE1-210ENST00000601662 HERC2O95714 4834 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 F8WDY8 70 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 PRSS2P07478 247 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 STPG4Q8N801 248 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 ORAOV1Q8WV07 137 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
USE1-210ENST00000601662 E9PLD3 99 aa9.5□□□□□ -0.89
USE1-210ENST00000601662 LEPROTO15243 131 aa9.5□□□□□ -0.89
USE1-210ENST00000601662 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
USE1-210ENST00000601662 Q8IZM0 81 aa9.5□□□□□ -0.89
USE1-210ENST00000601662 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
USE1-210ENST00000601662 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
USE1-210ENST00000601662 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
USE1-210ENST00000601662 LECT2O14960 151 aa9.49□□□□□ -0.89
USE1-210ENST00000601662 C15orf56Q8N910 161 aa9.49□□□□□ -0.89
USE1-210ENST00000601662 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
USE1-210ENST00000601662 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
USE1-210ENST00000601662 hDV102S1A0JD36 115 aa9.48□□□□□ -0.89
USE1-210ENST00000601662 LRCOL1A6NCL2 159 aa9.48□□□□□ -0.89
USE1-210ENST00000601662 SMIM6P0DI80 62 aa9.48□□□□□ -0.89
USE1-210ENST00000601662 S100A12P80511 92 aa9.48□□□□□ -0.89
USE1-210ENST00000601662 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
USE1-210ENST00000601662 SFTA2Q6UW10 78 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms