RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CXCL6P80162 114 aa6.97□□□□□ -1.29
NFKB1-212ENST00000600343 ARRDC1-AS1Q9H2J1 176 aa6.97□□□□□ -1.29
NFKB1-212ENST00000600343 Q8N6K4 173 aa6.97□□□□□ -1.29
NFKB1-212ENST00000600343 DMDP11532 3685 aa6.96□□□□□ -1.29
NFKB1-212ENST00000600343 SPENQ96T58 3664 aaKnown RBP6.96□□□□□ -1.29
NFKB1-212ENST00000600343 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.29
NFKB1-212ENST00000600343 BPY2O14599 106 aa6.96□□□□□ -1.29
NFKB1-212ENST00000600343 APOC4P55056 127 aa6.96□□□□□ -1.29
NFKB1-212ENST00000600343 CCL18P55774 89 aa6.96□□□□□ -1.29
NFKB1-212ENST00000600343 hDV103S1A0JD37 113 aa6.96□□□□□ -1.3
NFKB1-212ENST00000600343 C19orf54Q5BKX5 351 aa6.96□□□□□ -1.3
NFKB1-212ENST00000600343 Q6ZQT0 140 aa6.96□□□□□ -1.3
NFKB1-212ENST00000600343 C22orf34Q6ZV56 151 aa6.96□□□□□ -1.3
NFKB1-212ENST00000600343 SCXQ7RTU7 201 aa6.96□□□□□ -1.3
NFKB1-212ENST00000600343 LINC00167Q96N53 147 aa6.96□□□□□ -1.3
NFKB1-212ENST00000600343 K7EQG2 157 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 ATP6V0E1O15342 81 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 Q8N814 137 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 DOPEY2Q9Y3R5 2298 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 UBE2E2Q96LR5 201 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 G3V318 75 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 DEFB109BQ30KR1 87 aa6.95□□□□□ -1.3
NFKB1-212ENST00000600343 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
NFKB1-212ENST00000600343 GNLYP22749 145 aa6.94□□□□□ -1.3
NFKB1-212ENST00000600343 CSMD1Q96PZ7 3565 aa6.94□□□□□ -1.3
NFKB1-212ENST00000600343 TRAV22A0A0B4J277 110 aa6.94□□□□□ -1.3
NFKB1-212ENST00000600343 M0R2N4 97 aa6.94□□□□□ -1.3
NFKB1-212ENST00000600343 UBE2BP63146 152 aa6.94□□□□□ -1.3
NFKB1-212ENST00000600343 ATP1A1-AS1Q5TC04 95 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 MINOS1Q5TGZ0 78 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 IGFL3Q6UXB1 125 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 ZNF843Q8N446 348 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 TOMM7Q9P0U1 55 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 ZFHX4Q86UP3 3567 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 LINC00588Q9Y4M8 146 aa6.93□□□□□ -1.3
NFKB1-212ENST00000600343 M0R378 163 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 TMEM105Q8N8V8 129 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 ODF3BA8MYP8 253 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 SEM1Q6ZVN7 128 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 Q8N9W7 124 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 SORL1Q92673 2214 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 A8MU10 97 aa6.92□□□□□ -1.3
NFKB1-212ENST00000600343 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
NFKB1-212ENST00000600343 LOC110117498A0A087WWA1 95 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 LYNX1G3V0Z9 82 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 LYNX1P0DP58 116 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 HTN1P15515 57 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 SMG1Q96Q15 3661 aaKnown RBP6.91□□□□□ -1.3
NFKB1-212ENST00000600343 TRBV6-4A0A1B0GX49 114 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 SYCNQ0VAF6 134 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 NTM-AS1Q6ZSK4 140 aa6.91□□□□□ -1.3
NFKB1-212ENST00000600343 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.3
NFKB1-212ENST00000600343 LY6G6DO95868 133 aa6.9□□□□□ -1.3
NFKB1-212ENST00000600343 Q8NA96 180 aa6.9□□□□□ -1.3
NFKB1-212ENST00000600343 LINC01560Q8TB33 94 aa6.9□□□□□ -1.3
NFKB1-212ENST00000600343 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.312e-6■■■■□ 23.2
NFKB1-212ENST00000600343 FAM19A3Q7Z5A8 133 aa6.9□□□□□ -1.31
NFKB1-212ENST00000600343 A8MUN3 132 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 SPINK13Q1W4C9 94 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 Q6ZSN1 163 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 KLK9Q2XQG4 91 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 RHPN1-AS1Q9BWJ2 59 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 NDUFA4O00483 81 aa6.89□□□□□ -1.31
NFKB1-212ENST00000600343 H3BS24 57 aa6.88□□□□□ -1.31
NFKB1-212ENST00000600343 FDCSPQ8NFU4 85 aa6.88□□□□□ -1.31
NFKB1-212ENST00000600343 DMXL2Q8TDJ6 3036 aa6.88□□□□□ -1.31
NFKB1-212ENST00000600343 COL6A6A6NMZ7 2263 aa6.88□□□□□ -1.31
NFKB1-212ENST00000600343 NDUFS5O43920 106 aa6.88□□□□□ -1.31
NFKB1-212ENST00000600343 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
NFKB1-212ENST00000600343 CD164L2Q6UWJ8 174 aa6.87□□□□□ -1.31
NFKB1-212ENST00000600343 A0A096LNT2 108 aa6.87□□□□□ -1.31
NFKB1-212ENST00000600343 ZNF73O43830 326 aaPredicted RBP6.86□□□□□ -1.31
NFKB1-212ENST00000600343 LINC00269Q8N2A0 174 aa6.86□□□□□ -1.31
NFKB1-212ENST00000600343 EYSQ5T1H1 3165 aa6.86□□□□□ -1.31
NFKB1-212ENST00000600343 K7EQD1 137 aa6.86□□□□□ -1.31
NFKB1-212ENST00000600343 PDE6GP18545 87 aa6.85□□□□□ -1.31
NFKB1-212ENST00000600343 UBE2AP49459 152 aa6.85□□□□□ -1.31
NFKB1-212ENST00000600343 UBE2L6O14933 153 aa6.85□□□□□ -1.31
NFKB1-212ENST00000600343 TACC2O95359 2948 aa6.85□□□□□ -1.31
NFKB1-212ENST00000600343 C8orf87E5RJ46 101 aa6.84□□□□□ -1.31
NFKB1-212ENST00000600343 C19orf84I3L1E1 186 aa6.84□□□□□ -1.31
NFKB1-212ENST00000600343 Q8N9L7 120 aa6.84□□□□□ -1.31
NFKB1-212ENST00000600343 C11orf44Q8N8P7 122 aa6.84□□□□□ -1.31
NFKB1-212ENST00000600343 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 IGHV3-11P01762 117 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 CDC42SE2Q9NRR3 84 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 TTC28Q96AY4 2481 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 Q5VV11 94 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 NANOS2P60321 138 aaKnown RBP6.83□□□□□ -1.32
NFKB1-212ENST00000600343 FAM215AQ9Y5M1 114 aa6.83□□□□□ -1.32
NFKB1-212ENST00000600343 PSCAO43653 123 aa6.82□□□□□ -1.32
NFKB1-212ENST00000600343 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
NFKB1-212ENST00000600343 C9orf66Q5T8R8 295 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms