RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 TRAPPC1Q9Y5R8 145 aa7.47□□□□□ -1.21
HOMER3-211ENST00000599808 KRTAP9-6A0A140TA67 174 aa7.46□□□□□ -1.22
HOMER3-211ENST00000599808 XKRY2A2RUG3 117 aa7.46□□□□□ -1.22
HOMER3-211ENST00000599808 HIGD1CA8MV81 97 aa7.46□□□□□ -1.22
HOMER3-211ENST00000599808 ZNF25P17030 456 aaPredicted RBP7.46□□□□□ -1.22
HOMER3-211ENST00000599808 CAMPP49913 170 aa7.46□□□□□ -1.22
HOMER3-211ENST00000599808 SNRPEP62304 92 aaKnown RBP7.46□□□□□ -1.22
HOMER3-211ENST00000599808 FABP9Q0Z7S8 132 aa7.46□□□□□ -1.22
HOMER3-211ENST00000599808 C9orf116Q5BN46 136 aaPredicted RBP7.46□□□□□ -1.22
HOMER3-211ENST00000599808 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
HOMER3-211ENST00000599808 TMEM136Q6ZRR5 245 aa7.46□□□□□ -1.22
HOMER3-211ENST00000599808 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
HOMER3-211ENST00000599808 IGLV4-69A0A075B6H9 119 aa7.45□□□□□ -1.22
HOMER3-211ENST00000599808 CTRLP40313 264 aa7.45□□□□□ -1.22
HOMER3-211ENST00000599808 TWIST1Q15672 202 aa7.45□□□□□ -1.22
HOMER3-211ENST00000599808 CD164L2Q6UWJ8 174 aa7.45□□□□□ -1.22
HOMER3-211ENST00000599808 DIRC1Q969H9 104 aa7.45□□□□□ -1.22
HOMER3-211ENST00000599808 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
HOMER3-211ENST00000599808 IGLV7-43P04211 117 aa7.44□□□□□ -1.22
HOMER3-211ENST00000599808 SS18Q15532 418 aa7.44□□□□□ -1.22
HOMER3-211ENST00000599808 PRR4Q16378 134 aa7.44□□□□□ -1.22
HOMER3-211ENST00000599808 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
HOMER3-211ENST00000599808 MRPL54Q6P161 138 aaKnown RBP7.44□□□□□ -1.22
HOMER3-211ENST00000599808 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
HOMER3-211ENST00000599808 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
HOMER3-211ENST00000599808 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
HOMER3-211ENST00000599808 A0A1B0GW15 77 aa7.43□□□□□ -1.22
HOMER3-211ENST00000599808 H0Y9J4 135 aa7.43□□□□□ -1.22
HOMER3-211ENST00000599808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
HOMER3-211ENST00000599808 APOMO95445 188 aa7.43□□□□□ -1.22
HOMER3-211ENST00000599808 NDUFA6P56556 154 aa7.43□□□□□ -1.22
HOMER3-211ENST00000599808 HBBP68871 147 aa7.43□□□□□ -1.22
HOMER3-211ENST00000599808 IGLV1-50A0A075B6I6 118 aa7.42□□□□□ -1.22
HOMER3-211ENST00000599808 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
HOMER3-211ENST00000599808 ESDP10768 282 aa7.42□□□□□ -1.22
HOMER3-211ENST00000599808 RPL18AQ02543 176 aaKnown RBP7.42□□□□□ -1.22
HOMER3-211ENST00000599808 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
HOMER3-211ENST00000599808 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 I3L3M4 83 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 S100A8P05109 93 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 PMCHP20382 165 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 RIGQ13278 110 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 HIST3H2BBQ8N257 126 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 CAMK2N2Q96S95 79 aa7.41□□□□□ -1.22
HOMER3-211ENST00000599808 IFITM10A6NMD0 228 aa7.4□□□□□ -1.22
HOMER3-211ENST00000599808 TSHBP01222 138 aa7.4□□□□□ -1.22
HOMER3-211ENST00000599808 MALP21145 153 aa7.4□□□□□ -1.22
HOMER3-211ENST00000599808 MRPL52Q86TS9 123 aaKnown RBP7.4□□□□□ -1.22
HOMER3-211ENST00000599808 MRAP2Q96G30 205 aa7.4□□□□□ -1.22
HOMER3-211ENST00000599808 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.22
HOMER3-211ENST00000599808 A0A087WZ39 114 aa7.39□□□□□ -1.23
HOMER3-211ENST00000599808 TRBV6-5A0A0K0K1A5 114 aa7.39□□□□□ -1.23
HOMER3-211ENST00000599808 COX7A2LO14548 114 aa7.39□□□□□ -1.23
HOMER3-211ENST00000599808 BORCS7Q96B45 105 aa7.39□□□□□ -1.23
HOMER3-211ENST00000599808 C2orf48Q96LS8 159 aa7.39□□□□□ -1.23
HOMER3-211ENST00000599808 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
HOMER3-211ENST00000599808 SMIM15Q7Z3B0 74 aa7.37□□□□□ -1.23
HOMER3-211ENST00000599808 ALKBH7Q9BT30 221 aaPredicted RBP7.37□□□□□ -1.23
HOMER3-211ENST00000599808 UBE2D1P51668 147 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 AKR1D1P51857 326 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 LINC00310P59036 64 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 RNF151Q2KHN1 245 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 KIAA1644Q3SXP7 199 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 C5orf38Q86SI9 138 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 HIST1H2BLQ99880 126 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 ST20Q9HBF5 79 aa7.36□□□□□ -1.23
HOMER3-211ENST00000599808 SMIM6P0DI80 62 aa7.35□□□□□ -1.23
HOMER3-211ENST00000599808 S100A2P29034 98 aa7.35□□□□□ -1.23
HOMER3-211ENST00000599808 RPL13AP40429 203 aaKnown RBP7.35□□□□□ -1.23
HOMER3-211ENST00000599808 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
HOMER3-211ENST00000599808 SPAG11BQ08648 103 aa7.35□□□□□ -1.23
HOMER3-211ENST00000599808 RNASE13Q5GAN3 156 aaKnown RBP7.35□□□□□ -1.23
HOMER3-211ENST00000599808 LINC00518Q8N0U6 118 aa7.35□□□□□ -1.23
HOMER3-211ENST00000599808 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
HOMER3-211ENST00000599808 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
HOMER3-211ENST00000599808 FAM104BQ5XKR9 115 aa7.34□□□□□ -1.23
HOMER3-211ENST00000599808 TMEM18Q96B42 140 aa7.34□□□□□ -1.23
HOMER3-211ENST00000599808 TMEM191AQ9H0A3 160 aa7.34□□□□□ -1.23
HOMER3-211ENST00000599808 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 TRBV27A0A0K0K1C4 114 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 NUPR1O60356 82 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 SERF1AO75920 110 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 FABP4P15090 132 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 PDZD11Q5EBL8 140 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 FAM19A5Q7Z5A7 132 aaPredicted RBP7.33□□□□□ -1.24
HOMER3-211ENST00000599808 BAGE3Q86Y29 109 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
HOMER3-211ENST00000599808 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
HOMER3-211ENST00000599808 CSDC2Q9Y534 153 aaKnown RBP7.33□□□□□ -1.24
HOMER3-211ENST00000599808 C10orf25Q5T742 122 aa7.32□□□□□ -1.24
HOMER3-211ENST00000599808 OR10D4PQ8NGN7 298 aa7.32□□□□□ -1.24
HOMER3-211ENST00000599808 UBE2D4Q9Y2X8 147 aa7.32□□□□□ -1.24
HOMER3-211ENST00000599808 TSPAN13O95857 204 aa7.31□□□□□ -1.24
HOMER3-211ENST00000599808 Q6ZUT4 128 aa7.31□□□□□ -1.24
HOMER3-211ENST00000599808 PPBPP02775 128 aa7.3□□□□□ -1.24
HOMER3-211ENST00000599808 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
HOMER3-211ENST00000599808 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
HOMER3-211ENST00000599808 GAGE2EQ4V326 116 aa7.3□□□□□ -1.24
HOMER3-211ENST00000599808 AMN1Q8IY45 258 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms