RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
SHKBP1-218ENST00000598907 IGHV3-30-5P0DP03 117 aa9.14□□□□□ -0.95
SHKBP1-218ENST00000598907 TMEM141Q96I45 108 aa9.14□□□□□ -0.95
SHKBP1-218ENST00000598907 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
SHKBP1-218ENST00000598907 PACRGQ96M98 296 aaPredicted RBP9.14□□□□□ -0.95
SHKBP1-218ENST00000598907 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
SHKBP1-218ENST00000598907 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 HIST3H2BBQ8N257 126 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
SHKBP1-218ENST00000598907 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
SHKBP1-218ENST00000598907 SNRPEP62304 92 aaKnown RBP9.12□□□□□ -0.95
SHKBP1-218ENST00000598907 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
SHKBP1-218ENST00000598907 Q6ZUT4 128 aa9.12□□□□□ -0.95
SHKBP1-218ENST00000598907 AMELXQ99217 191 aa9.12□□□□□ -0.95
SHKBP1-218ENST00000598907 Q9HAA7 133 aa9.12□□□□□ -0.95
SHKBP1-218ENST00000598907 IBA57-AS1B1ANH7 110 aa9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 ATP5LO75964 103 aa9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 ANGP03950 147 aaKnown RBP9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 LINC00173Q6ZV60 143 aa9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 C10orf126Q8N4M7 172 aa9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 KLK12Q9UKR0 248 aa9.11□□□□□ -0.95
SHKBP1-218ENST00000598907 KRTAP9-6A0A140TA67 174 aa9.1□□□□□ -0.95
SHKBP1-218ENST00000598907 ENHOQ6UWT2 76 aa9.1□□□□□ -0.95
SHKBP1-218ENST00000598907 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
SHKBP1-218ENST00000598907 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
SHKBP1-218ENST00000598907 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
SHKBP1-218ENST00000598907 IFITM10A6NMD0 228 aa9.09□□□□□ -0.95
SHKBP1-218ENST00000598907 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
SHKBP1-218ENST00000598907 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
SHKBP1-218ENST00000598907 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
SHKBP1-218ENST00000598907 HSPB8Q9UJY1 196 aa9.09□□□□□ -0.95
SHKBP1-218ENST00000598907 FABP4P15090 132 aa9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 REG3AQ06141 175 aa9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 WFDC2Q14508 124 aa9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 HIST1H2BLQ99880 126 aa9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 VCX2Q9H322 139 aa9.08□□□□□ -0.96
SHKBP1-218ENST00000598907 LECT2O14960 151 aa9.07□□□□□ -0.96
SHKBP1-218ENST00000598907 RPL37AP61513 92 aaKnown RBP9.07□□□□□ -0.96
SHKBP1-218ENST00000598907 Q6ZN92 141 aa9.07□□□□□ -0.96
SHKBP1-218ENST00000598907 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
SHKBP1-218ENST00000598907 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 CCL25O15444 150 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 S100A2P29034 98 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 PMVKQ15126 192 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 MIAQ16674 131 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 CHAC1Q9BUX1 264 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 CST9LQ9H4G1 147 aa9.06□□□□□ -0.96
SHKBP1-218ENST00000598907 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
SHKBP1-218ENST00000598907 TRAV12-1A0A0B4J245 112 aa9.05□□□□□ -0.96
SHKBP1-218ENST00000598907 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
SHKBP1-218ENST00000598907 UBE2D1P51668 147 aa9.05□□□□□ -0.96
SHKBP1-218ENST00000598907 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
SHKBP1-218ENST00000598907 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
SHKBP1-218ENST00000598907 CRPP02741 224 aa9.04□□□□□ -0.96
SHKBP1-218ENST00000598907 PRSS1P07477 247 aa9.04□□□□□ -0.96
SHKBP1-218ENST00000598907 C2orf88Q9BSF0 95 aa9.04□□□□□ -0.96
SHKBP1-218ENST00000598907 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
SHKBP1-218ENST00000598907 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
SHKBP1-218ENST00000598907 LINC00242Q5T6M2 205 aa9.03□□□□□ -0.96
SHKBP1-218ENST00000598907 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
SHKBP1-218ENST00000598907 IGKV3OR2-268A0A0C4DH90 116 aa9.02□□□□□ -0.97
SHKBP1-218ENST00000598907 SYS1-DBNDD2H3BUS1 97 aa9.02□□□□□ -0.97
SHKBP1-218ENST00000598907 ODF1Q14990 250 aa9.02□□□□□ -0.97
SHKBP1-218ENST00000598907 SS18Q15532 418 aa9.02□□□□□ -0.97
SHKBP1-218ENST00000598907 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
SHKBP1-218ENST00000598907 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
SHKBP1-218ENST00000598907 PET117Q6UWS5 81 aa9.01□□□□□ -0.97
SHKBP1-218ENST00000598907 CHCHD10Q8WYQ3 142 aaPredicted RBP9.01□□□□□ -0.97
SHKBP1-218ENST00000598907 FAT4Q6V0I7 4981 aa9.01□□□□□ -0.97
SHKBP1-218ENST00000598907 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 F8VRH5 84 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 IGLC3P0DOY3 106 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 COX6A2Q02221 97 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 RMI2Q96E14 147 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 C1orf43Q9BWL3 253 aa9□□□□□ -0.97
SHKBP1-218ENST00000598907 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
SHKBP1-218ENST00000598907 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 KRTDAPP60985 99 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 SEC11AP67812 179 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 FOXI1Q12951 378 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 MRPL35Q9NZE8 188 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 COX11Q9Y6N1 276 aa8.99□□□□□ -0.97
SHKBP1-218ENST00000598907 IGKV2D-24A0A075B6R9 120 aa8.98□□□□□ -0.97
SHKBP1-218ENST00000598907 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms