RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 HAMPP81172 84 aa11.27□□□□□ -0.61
USHBP1-209ENST00000598570 FABP9Q0Z7S8 132 aa11.27□□□□□ -0.61
USHBP1-209ENST00000598570 LINC00242Q5T6M2 205 aa11.27□□□□□ -0.61
USHBP1-209ENST00000598570 TIMM17AQ99595 171 aa11.27□□□□□ -0.61
USHBP1-209ENST00000598570 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-209ENST00000598570 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
USHBP1-209ENST00000598570 SMR3BP02814 79 aaPredicted RBP11.26□□□□□ -0.61
USHBP1-209ENST00000598570 UBE2D1P51668 147 aa11.26□□□□□ -0.61
USHBP1-209ENST00000598570 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
USHBP1-209ENST00000598570 Q5VSD8 79 aa11.26□□□□□ -0.61
USHBP1-209ENST00000598570 F8WDY8 70 aa11.25□□□□□ -0.61
USHBP1-209ENST00000598570 KRTAP10-4P60372 401 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-209ENST00000598570 LINC01561Q8N1V8 128 aa11.25□□□□□ -0.61
USHBP1-209ENST00000598570 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
USHBP1-209ENST00000598570 C2orf48Q96LS8 159 aa11.25□□□□□ -0.61
USHBP1-209ENST00000598570 A0A087WZ39 114 aa11.24□□□□□ -0.61
USHBP1-209ENST00000598570 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
USHBP1-209ENST00000598570 ERASQ7Z444 233 aa11.24□□□□□ -0.61
USHBP1-209ENST00000598570 SLC7A5P1Q8MH63 180 aa11.24□□□□□ -0.61
USHBP1-209ENST00000598570 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
USHBP1-209ENST00000598570 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 COX6A2Q02221 97 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 OR10D4PQ8NGN7 298 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 SPACA4Q8TDM5 124 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
USHBP1-209ENST00000598570 APOMO95445 188 aa11.22□□□□□ -0.61
USHBP1-209ENST00000598570 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
USHBP1-209ENST00000598570 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
USHBP1-209ENST00000598570 VCX2Q9H322 139 aa11.22□□□□□ -0.61
USHBP1-209ENST00000598570 IGLV4-69A0A075B6H9 119 aa11.21□□□□□ -0.61
USHBP1-209ENST00000598570 ZNF561-AS1K7EIQ3 104 aa11.21□□□□□ -0.61
USHBP1-209ENST00000598570 MALP21145 153 aa11.21□□□□□ -0.61
USHBP1-209ENST00000598570 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
USHBP1-209ENST00000598570 RNF151Q2KHN1 245 aa11.21□□□□□ -0.61
USHBP1-209ENST00000598570 SMCO4Q9NRQ5 59 aa11.21□□□□□ -0.61
USHBP1-209ENST00000598570 KIAA0087Q14695 138 aa11.2□□□□□ -0.62
USHBP1-209ENST00000598570 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
USHBP1-209ENST00000598570 PLAC8Q9NZF1 115 aa11.2□□□□□ -0.62
USHBP1-209ENST00000598570 A0A096LNJ9 63 aa11.19□□□□□ -0.62
USHBP1-209ENST00000598570 ZC2HC1BQ5TFG8 222 aa11.19□□□□□ -0.62
USHBP1-209ENST00000598570 Q6ZN92 141 aa11.19□□□□□ -0.62
USHBP1-209ENST00000598570 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
USHBP1-209ENST00000598570 CARD19Q96LW7 228 aa11.19□□□□□ -0.62
USHBP1-209ENST00000598570 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
USHBP1-209ENST00000598570 LINC00614P0C842 121 aa11.18□□□□□ -0.62
USHBP1-209ENST00000598570 PKIGQ9Y2B9 76 aa11.18□□□□□ -0.62
USHBP1-209ENST00000598570 Q6ZRU5 148 aa11.17□□□□□ -0.62
USHBP1-209ENST00000598570 FA2HQ7L5A8 372 aa11.17□□□□□ -0.62
USHBP1-209ENST00000598570 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
USHBP1-209ENST00000598570 A0A087WYN8 130 aa11.16□□□□□ -0.62
USHBP1-209ENST00000598570 PLA2G1BP04054 148 aaKnown RBP11.16□□□□□ -0.62
USHBP1-209ENST00000598570 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
USHBP1-209ENST00000598570 SEC11AP67812 179 aa11.16□□□□□ -0.62
USHBP1-209ENST00000598570 CBLN2Q8IUK8 224 aa11.16□□□□□ -0.62
USHBP1-209ENST00000598570 MRPL35Q9NZE8 188 aaKnown RBP11.16□□□□□ -0.62
USHBP1-209ENST00000598570 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
USHBP1-209ENST00000598570 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
USHBP1-209ENST00000598570 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
USHBP1-209ENST00000598570 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
USHBP1-209ENST00000598570 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
USHBP1-209ENST00000598570 A0A096LNI7 61 aa11.14□□□□□ -0.63
USHBP1-209ENST00000598570 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
USHBP1-209ENST00000598570 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
USHBP1-209ENST00000598570 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
USHBP1-209ENST00000598570 TLX1NBP0CAT3 122 aa11.13□□□□□ -0.63
USHBP1-209ENST00000598570 RAB5BP61020 215 aa11.13□□□□□ -0.63
USHBP1-209ENST00000598570 HERVK_113P63121 156 aa11.13□□□□□ -0.63
USHBP1-209ENST00000598570 CAMK2N2Q96S95 79 aa11.13□□□□□ -0.63
USHBP1-209ENST00000598570 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
USHBP1-209ENST00000598570 TINCRA0A1B0GVN0 87 aa11.12□□□□□ -0.63
USHBP1-209ENST00000598570 COLCA2A8K830 154 aa11.12□□□□□ -0.63
USHBP1-209ENST00000598570 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.12□□□□□ -0.63
USHBP1-209ENST00000598570 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
USHBP1-209ENST00000598570 MYCBP2O75592 4640 aa11.12□□□□□ -0.63
USHBP1-209ENST00000598570 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
USHBP1-209ENST00000598570 PMVKQ15126 192 aa11.11□□□□□ -0.63
USHBP1-209ENST00000598570 C10orf25Q5T742 122 aa11.11□□□□□ -0.63
USHBP1-209ENST00000598570 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
USHBP1-209ENST00000598570 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
USHBP1-209ENST00000598570 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
USHBP1-209ENST00000598570 NDUFA1O15239 70 aa11.09□□□□□ -0.63
USHBP1-209ENST00000598570 HBDP02042 147 aa11.09□□□□□ -0.63
USHBP1-209ENST00000598570 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
USHBP1-209ENST00000598570 MAJINQ3KP22 176 aa11.08□□□□□ -0.64
USHBP1-209ENST00000598570 Q8IZM0 81 aa11.08□□□□□ -0.64
USHBP1-209ENST00000598570 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
USHBP1-209ENST00000598570 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
USHBP1-209ENST00000598570 IGKV2-24A0A0C4DH68 120 aa11.06□□□□□ -0.64
USHBP1-209ENST00000598570 TRGC2P03986 189 aa11.06□□□□□ -0.64
USHBP1-209ENST00000598570 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
USHBP1-209ENST00000598570 STPG4Q8N801 248 aa11.06□□□□□ -0.64
USHBP1-209ENST00000598570 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
USHBP1-209ENST00000598570 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
USHBP1-209ENST00000598570 ATP5LO75964 103 aa11.05□□□□□ -0.64
USHBP1-209ENST00000598570 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
USHBP1-209ENST00000598570 RPL37AP61513 92 aaKnown RBP11.04□□□□□ -0.64
USHBP1-209ENST00000598570 ODF1Q14990 250 aa11.04□□□□□ -0.64
USHBP1-209ENST00000598570 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms