RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PRSS1P07477 247 aa14.54□□□□□ -0.08
CHMP2A-204ENST00000597848 IFI27L1Q96BM0 104 aa14.54□□□□□ -0.08
CHMP2A-204ENST00000597848 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.53□□□□□ -0.08
CHMP2A-204ENST00000597848 LEPROTL1O95214 131 aa14.53□□□□□ -0.08
CHMP2A-204ENST00000597848 FUSP35637 526 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHMP2A-204ENST00000597848 KRTAP10-2P60368 255 aa14.53□□□□□ -0.08
CHMP2A-204ENST00000597848 A0A0J9YXV3 536 aa14.52□□□□□ -0.09
CHMP2A-204ENST00000597848 FABP4P15090 132 aa14.52□□□□□ -0.09
CHMP2A-204ENST00000597848 SEC11AP67812 179 aa14.52□□□□□ -0.09
CHMP2A-204ENST00000597848 COX6A2Q02221 97 aa14.52□□□□□ -0.09
CHMP2A-204ENST00000597848 GEMIN7Q9H840 131 aaKnown RBP14.52□□□□□ -0.09
CHMP2A-204ENST00000597848 PGPEP1Q9NXJ5 209 aa14.52□□□□□ -0.09
CHMP2A-204ENST00000597848 IGHV3OR16-9A0A0B4J2B5 98 aa14.51□□□□□ -0.09
CHMP2A-204ENST00000597848 hDV102S1A0JD36 115 aa14.51□□□□□ -0.09
CHMP2A-204ENST00000597848 IGHV1-58A0A0C4DH39 117 aa14.5□□□□□ -0.09
CHMP2A-204ENST00000597848 COA6Q5JTJ3 125 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-204ENST00000597848 FAM19A3Q7Z5A8 133 aa14.5□□□□□ -0.09
CHMP2A-204ENST00000597848 C15orf56Q8N910 161 aa14.5□□□□□ -0.09
CHMP2A-204ENST00000597848 HSPB8Q9UJY1 196 aa14.5□□□□□ -0.09
CHMP2A-204ENST00000597848 HERVK_113P63121 156 aa14.49□□□□□ -0.09
CHMP2A-204ENST00000597848 HIGD2BQ4VC39 106 aa14.49□□□□□ -0.09
CHMP2A-204ENST00000597848 NTN5Q8WTR8 489 aaPredicted RBP14.49□□□□□ -0.09
CHMP2A-204ENST00000597848 IGLV5-52A0A0A0MRZ9 124 aa14.48□□□□□ -0.09
CHMP2A-204ENST00000597848 APOMO95445 188 aa14.48□□□□□ -0.09
CHMP2A-204ENST00000597848 TINCRA0A1B0GVN0 87 aa14.47□□□□□ -0.09
CHMP2A-204ENST00000597848 FAT2Q9NYQ8 4349 aa14.46□□□□□ -0.09
CHMP2A-204ENST00000597848 A0A087WZ39 114 aa14.46□□□□□ -0.09
CHMP2A-204ENST00000597848 H0Y8G0 127 aa14.46□□□□□ -0.09
CHMP2A-204ENST00000597848 CDPF1Q6NVV7 123 aa14.46□□□□□ -0.09
CHMP2A-204ENST00000597848 C16orf90A8MZG2 172 aa14.45□□□□□ -0.1
CHMP2A-204ENST00000597848 LINC00469Q8N7U9 141 aa14.45□□□□□ -0.1
CHMP2A-204ENST00000597848 CDKN2A-AS1Q9UH64 79 aa14.45□□□□□ -0.1
CHMP2A-204ENST00000597848 CHTOPQ9Y3Y2 248 aaKnown RBP14.45□□□□□ -0.1
CHMP2A-204ENST00000597848 GVQW2A0A096LPI5 108 aaPredicted RBP14.44□□□□□ -0.1
CHMP2A-204ENST00000597848 ZNF561-AS1K7EIQ3 104 aa14.44□□□□□ -0.1
CHMP2A-204ENST00000597848 TRAV12-1A0A0B4J245 112 aa14.43□□□□□ -0.1
CHMP2A-204ENST00000597848 IGLC3P0DOY3 106 aa14.43□□□□□ -0.1
CHMP2A-204ENST00000597848 ORAOV1Q8WV07 137 aa14.43□□□□□ -0.1
CHMP2A-204ENST00000597848 LINC00526Q96FQ7 95 aa14.43□□□□□ -0.1
CHMP2A-204ENST00000597848 CHAC1Q9BUX1 264 aa14.43□□□□□ -0.1
CHMP2A-204ENST00000597848 IGHV3-64A0A075B6Q5 118 aa14.42□□□□□ -0.1
CHMP2A-204ENST00000597848 S100A6P06703 90 aa14.42□□□□□ -0.1
CHMP2A-204ENST00000597848 PACRGQ96M98 296 aaPredicted RBP14.42□□□□□ -0.1
CHMP2A-204ENST00000597848 LINC01561Q8N1V8 128 aa14.41□□□□□ -0.1
CHMP2A-204ENST00000597848 MAP1LC3CQ9BXW4 147 aa14.41□□□□□ -0.1
CHMP2A-204ENST00000597848 IGLV4-69A0A075B6H9 119 aa14.4□□□□□ -0.1
CHMP2A-204ENST00000597848 SPAG11BQ08648 103 aa14.4□□□□□ -0.1
CHMP2A-204ENST00000597848 OR10D4PQ8NGN7 298 aa14.4□□□□□ -0.1
CHMP2A-204ENST00000597848 IGLV5-45A0A087WSX0 123 aa14.39□□□□□ -0.11
CHMP2A-204ENST00000597848 GCSHP23434 173 aa14.39□□□□□ -0.11
CHMP2A-204ENST00000597848 MRPL35Q9NZE8 188 aaKnown RBP14.39□□□□□ -0.11
CHMP2A-204ENST00000597848 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.38□□□□□ -0.11
CHMP2A-204ENST00000597848 F8VRH5 84 aa14.38□□□□□ -0.11
CHMP2A-204ENST00000597848 H3BRM9 83 aa14.38□□□□□ -0.11
CHMP2A-204ENST00000597848 SLPIP03973 132 aa14.38□□□□□ -0.11
CHMP2A-204ENST00000597848 CNBPP62633 177 aaKnown RBP14.38□□□□□ -0.11
CHMP2A-204ENST00000597848 C11orf86A6NJI1 115 aa14.37□□□□□ -0.11
CHMP2A-204ENST00000597848 LINC01620Q4KN68 170 aa14.37□□□□□ -0.11
CHMP2A-204ENST00000597848 PKD1P98161 4303 aa14.36□□□□□ -0.11
CHMP2A-204ENST00000597848 ZNF22P17026 224 aaPredicted RBP14.36□□□□□ -0.11
CHMP2A-204ENST00000597848 ODF1Q14990 250 aa14.36□□□□□ -0.11
CHMP2A-204ENST00000597848 TMEM170BQ5T4T1 132 aa14.36□□□□□ -0.11
CHMP2A-204ENST00000597848 TOMM7Q9P0U1 55 aa14.36□□□□□ -0.11
CHMP2A-204ENST00000597848 PRSS2P07478 247 aa14.35□□□□□ -0.11
CHMP2A-204ENST00000597848 SPINK8P0C7L1 97 aa14.35□□□□□ -0.11
CHMP2A-204ENST00000597848 SYCNQ0VAF6 134 aa14.35□□□□□ -0.11
CHMP2A-204ENST00000597848 CAMK2N2Q96S95 79 aa14.35□□□□□ -0.11
CHMP2A-204ENST00000597848 S100A2P29034 98 aa14.34□□□□□ -0.11
CHMP2A-204ENST00000597848 C2orf48Q96LS8 159 aa14.34□□□□□ -0.11
CHMP2A-204ENST00000597848 DNAH11Q96DT5 4516 aa14.34□□□□□ -0.11
CHMP2A-204ENST00000597848 SMIM1B2RUZ4 78 aa14.33□□□□□ -0.12
CHMP2A-204ENST00000597848 SYS1-DBNDD2H3BUS1 97 aa14.33□□□□□ -0.12
CHMP2A-204ENST00000597848 KRTAP10-1P60331 282 aa14.33□□□□□ -0.12
CHMP2A-204ENST00000597848 HIST3H2BBQ8N257 126 aa14.33□□□□□ -0.12
CHMP2A-204ENST00000597848 C9orf163Q8N9P6 203 aa14.33□□□□□ -0.12
CHMP2A-204ENST00000597848 CARD19Q96LW7 228 aa14.33□□□□□ -0.12
CHMP2A-204ENST00000597848 HECTD4Q9Y4D8 3996 aa14.32□□□□□ -0.12
CHMP2A-204ENST00000597848 SNRPEP62304 92 aaKnown RBP14.32□□□□□ -0.12
CHMP2A-204ENST00000597848 KIAA0087Q14695 138 aa14.32□□□□□ -0.12
CHMP2A-204ENST00000597848 C6orf226Q5I0X4 101 aa14.32□□□□□ -0.12
CHMP2A-204ENST00000597848 PMCHL2Q9BQD1 86 aa14.32□□□□□ -0.12
CHMP2A-204ENST00000597848 EPPK1P58107 5090 aaKnown RBP14.32□□□□□ -0.12
CHMP2A-204ENST00000597848 KRTDAPP60985 99 aa14.31□□□□□ -0.12
CHMP2A-204ENST00000597848 F8WDY8 70 aa14.3□□□□□ -0.12
CHMP2A-204ENST00000597848 NDUFA1O15239 70 aa14.3□□□□□ -0.12
CHMP2A-204ENST00000597848 C3orf79P0CE67 100 aa14.3□□□□□ -0.12
CHMP2A-204ENST00000597848 Q6ZRU5 148 aa14.3□□□□□ -0.12
CHMP2A-204ENST00000597848 Q8IZM0 81 aa14.3□□□□□ -0.12
CHMP2A-204ENST00000597848 DPM2O94777 84 aa14.29□□□□□ -0.12
CHMP2A-204ENST00000597848 PLNP26678 52 aa14.29□□□□□ -0.12
CHMP2A-204ENST00000597848 CKS1BP61024 79 aa14.29□□□□□ -0.12
CHMP2A-204ENST00000597848 PET117Q6UWS5 81 aa14.29□□□□□ -0.12
CHMP2A-204ENST00000597848 COX7B2Q8TF08 81 aa14.29□□□□□ -0.12
CHMP2A-204ENST00000597848 C2orf82Q6UX34 121 aa14.28□□□□□ -0.12
CHMP2A-204ENST00000597848 UNQ6190/PRO20217Q6UXQ8 127 aa14.28□□□□□ -0.12
CHMP2A-204ENST00000597848 IGKCP01834 107 aa14.27□□□□□ -0.13
CHMP2A-204ENST00000597848 HIST1H2BLQ99880 126 aa14.27□□□□□ -0.13
CHMP2A-204ENST00000597848 C10orf25Q5T742 122 aa14.26□□□□□ -0.13
CHMP2A-204ENST00000597848 IGLV5-39A0A0G2JS06 123 aa14.25□□□□□ -0.13
CHMP2A-204ENST00000597848 TMEM223A0PJW6 202 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms