RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 ATP5LO75964 103 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 LINC00310P59036 64 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 PMVKQ15126 192 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 LINC00242Q5T6M2 205 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 FAM19A2Q8N3H0 131 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 C15orf56Q8N910 161 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 CST9LQ9H4G1 147 aa5.48□□□□□ -1.53
VRK3-211ENST00000596445 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
VRK3-211ENST00000596445 IGHV3OR16-9A0A0B4J2B5 98 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 IGHV1-58A0A0C4DH39 117 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 hDV102S1A0JD36 115 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 PRSS1P07477 247 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 MALP21145 153 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 FUSP35637 526 aaKnown RBP eCLIP5.47□□□□□ -1.53
VRK3-211ENST00000596445 SEC11AP67812 179 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 COX6A2Q02221 97 aa5.47□□□□□ -1.53
VRK3-211ENST00000596445 DNAH5Q8TE73 4624 aa5.46□□□□□ -1.54
VRK3-211ENST00000596445 IGLV5-52A0A0A0MRZ9 124 aa5.46□□□□□ -1.54
VRK3-211ENST00000596445 C16orf90A8MZG2 172 aa5.46□□□□□ -1.54
VRK3-211ENST00000596445 NUPR1O60356 82 aa5.46□□□□□ -1.54
VRK3-211ENST00000596445 APOMO95445 188 aa5.46□□□□□ -1.54
VRK3-211ENST00000596445 C5orf38Q86SI9 138 aa5.46□□□□□ -1.54
VRK3-211ENST00000596445 A0A087WZ39 114 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 GVQW2A0A096LPI5 108 aaPredicted RBP5.45□□□□□ -1.54
VRK3-211ENST00000596445 A0A0J9YXV3 536 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 TINCRA0A1B0GVN0 87 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 LEPROTL1O95214 131 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 NDUFA6P56556 154 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 HERVK_113P63121 156 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
VRK3-211ENST00000596445 GEMIN7Q9H840 131 aaKnown RBP5.45□□□□□ -1.54
VRK3-211ENST00000596445 GCSHP23434 173 aa5.44□□□□□ -1.54
VRK3-211ENST00000596445 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
VRK3-211ENST00000596445 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
VRK3-211ENST00000596445 COA6Q5JTJ3 125 aaKnown RBP5.44□□□□□ -1.54
VRK3-211ENST00000596445 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
VRK3-211ENST00000596445 OR10D4PQ8NGN7 298 aa5.44□□□□□ -1.54
VRK3-211ENST00000596445 HSPB8Q9UJY1 196 aa5.44□□□□□ -1.54
VRK3-211ENST00000596445 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 IGLV5-45A0A087WSX0 123 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.43□□□□□ -1.54
VRK3-211ENST00000596445 TRAV12-1A0A0B4J245 112 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 ZNF561-AS1K7EIQ3 104 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 SLPIP03973 132 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 LINC00469Q8N7U9 141 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 ORAOV1Q8WV07 137 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 CDKN2A-AS1Q9UH64 79 aa5.43□□□□□ -1.54
VRK3-211ENST00000596445 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 IGLV4-69A0A075B6H9 119 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 IGLC3P0DOY3 106 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 FABP4P15090 132 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 C9orf163Q8N9P6 203 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 C2orf48Q96LS8 159 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 PACRGQ96M98 296 aaPredicted RBP5.42□□□□□ -1.54
VRK3-211ENST00000596445 CHAC1Q9BUX1 264 aa5.42□□□□□ -1.54
VRK3-211ENST00000596445 CHTOPQ9Y3Y2 248 aaKnown RBP5.42□□□□□ -1.54
VRK3-211ENST00000596445 DYNC1H1Q14204 4646 aaKnown RBP5.41□□□□□ -1.54
VRK3-211ENST00000596445 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
VRK3-211ENST00000596445 F8WDY8 70 aa5.41□□□□□ -1.54
VRK3-211ENST00000596445 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
VRK3-211ENST00000596445 SPAG11BQ08648 103 aa5.41□□□□□ -1.54
VRK3-211ENST00000596445 LINC01620Q4KN68 170 aa5.41□□□□□ -1.54
VRK3-211ENST00000596445 C11orf86A6NJI1 115 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 F8VRH5 84 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 H0Y8G0 127 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 H3BRM9 83 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 SYCNQ0VAF6 134 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 ODF1Q14990 250 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 CARD19Q96LW7 228 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 MAP1LC3CQ9BXW4 147 aa5.4□□□□□ -1.54
VRK3-211ENST00000596445 MRPL35Q9NZE8 188 aaKnown RBP5.4□□□□□ -1.54
VRK3-211ENST00000596445 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
VRK3-211ENST00000596445 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
VRK3-211ENST00000596445 ZNF22P17026 224 aaPredicted RBP5.39□□□□□ -1.55
VRK3-211ENST00000596445 SDIM1Q6ZPB5 146 aa5.39□□□□□ -1.55
VRK3-211ENST00000596445 Q8IZM0 81 aa5.39□□□□□ -1.55
VRK3-211ENST00000596445 CAMK2N2Q96S95 79 aa5.39□□□□□ -1.55
VRK3-211ENST00000596445 NDUFA1O15239 70 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 CDK2AP2O75956 126 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 S100A6P06703 90 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 PRSS2P07478 247 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 C6orf226Q5I0X4 101 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 TMEM170BQ5T4T1 132 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 Q6ZRU5 148 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 Q6ZSA8 131 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
VRK3-211ENST00000596445 IGLV5-39A0A0G2JS06 123 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 SYS1-DBNDD2H3BUS1 97 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 PLNP26678 52 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 CKS1BP61024 79 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 RNF151Q2KHN1 245 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 COX7B2Q8TF08 81 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 FAM30AQ9NZY2 134 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
VRK3-211ENST00000596445 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms