RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	CARD19	Q96LW7	228 aa		5.06	□□□□□ -1.6
LINC00649-208	ENST00000596365	TMEM243	Q9BU79	118 aa		5.06	□□□□□ -1.6
LINC00649-208	ENST00000596365	TMEM167B	Q9NRX6	74 aa		5.06	□□□□□ -1.6
LINC00649-208	ENST00000596365	EPDR1	Q9UM22	224 aa		5.06	□□□□□ -1.6
LINC00649-208	ENST00000596365	TRBV20OR9-2	A0A075B6H5	130 aa		5.05	□□□□□ -1.6
LINC00649-208	ENST00000596365	TSTD3	H0UI37	97 aa		5.05	□□□□□ -1.6
LINC00649-208	ENST00000596365	KRTAP1-4	P0C5Y4	121 aa		5.05	□□□□□ -1.6
LINC00649-208	ENST00000596365	TMEM18	Q96B42	140 aa		5.05	□□□□□ -1.6
LINC00649-208	ENST00000596365	TRAPPC1	Q9Y5R8	145 aa		5.05	□□□□□ -1.6
LINC00649-208	ENST00000596365	LOC107984640	A0A0U1RRK4	108 aa		5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365		A0A1W2PNN7	141 aa		5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365		K7EN84	100 aa		5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365	UBE2L6	O14933	153 aa		5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365	GAGE2B	Q13066	116 aa		5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365	OCC1	Q8TAD7	63 aa		5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.04	□□□□□ -1.6
LINC00649-208	ENST00000596365	TMSB15B	A0A087X1C1	80 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	TRAV34	A0A0B4J273	112 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	IGKV3OR2-268	A0A0C4DH90	116 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	SH2D1A	O60880	128 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	DDT	P30046	118 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	CRIP1	P50238	77 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	SYCN	Q0VAF6	134 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	CENPW	Q5EE01	88 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	FAM162B	Q5T6X4	162 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	PHF5A	Q7RTV0	110 aa	Known RBP	5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	PRO1933	Q9H354	126 aa		5.03	□□□□□ -1.6
LINC00649-208	ENST00000596365	IGHV1-58	A0A0C4DH39	117 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365		A0A1W2PRE2	83 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365	FGF6	P10767	208 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365	GNG4	P50150	75 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365	C9orf116	Q5BN46	136 aa	Predicted RBP	5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365		Q86TA4	180 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365	LINC00526	Q96FQ7	95 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365	C14orf144	Q96I85	54 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365	OSTC	Q9NRP0	149 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365		V9GYV3	84 aa		5.02	□□□□□ -1.61
LINC00649-208	ENST00000596365		A0A087WZ39	114 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	SMIM17	P0DL12	118 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	TPRXL	Q17RH7	258 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	COX19	Q49B96	90 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	COX8C	Q7Z4L0	72 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	LINC00469	Q8N7U9	141 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	OR10AG1	Q8NH19	301 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	TSKU	Q8WUA8	353 aa		5.01	□□□□□ -1.61
LINC00649-208	ENST00000596365	ESD	P10768	282 aa		5	□□□□□ -1.61
LINC00649-208	ENST00000596365	MAL	P21145	153 aa		5	□□□□□ -1.61
LINC00649-208	ENST00000596365	SPANXN1	Q5VSR9	72 aa		5	□□□□□ -1.61
LINC00649-208	ENST00000596365	PGLYRP4	Q96LB8	373 aa		5	□□□□□ -1.61
LINC00649-208	ENST00000596365	GNB1L	Q9BYB4	327 aa		5	□□□□□ -1.61
LINC00649-208	ENST00000596365	ZFP30	Q9Y2G7	519 aa		5	□□□□□ -1.61
LINC00649-208	ENST00000596365	PEX7	O00628	323 aa		4.99	□□□□□ -1.61
LINC00649-208	ENST00000596365	SERF1A	O75920	110 aa		4.99	□□□□□ -1.61
LINC00649-208	ENST00000596365	CRYGA	P11844	174 aa		4.99	□□□□□ -1.61
LINC00649-208	ENST00000596365	CAMP	P49913	170 aa		4.99	□□□□□ -1.61
LINC00649-208	ENST00000596365	RNASE7	Q9H1E1	156 aa	Known RBP	4.99	□□□□□ -1.61
LINC00649-208	ENST00000596365	SMIM27	A0A1W2PRY6	76 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365		M0QY20	66 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	NUPR1	O60356	82 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	SCGB1D1	O95968	90 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	COTL1	Q14019	142 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	LBH	Q53QV2	105 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	AMMECR1L	Q6DCA0	310 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	TMEM136	Q6ZRR5	245 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	FAM231D	Q6ZW35	169 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	BAGE3	Q86Y29	109 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	BAGE2	Q86Y30	109 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	AP1S3	Q96PC3	154 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	C2orf88	Q9BSF0	95 aa		4.98	□□□□□ -1.61
LINC00649-208	ENST00000596365	IGLV4-69	A0A075B6H9	119 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	MUC21	A0A140T8X8	626 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	SNAI2	O43623	268 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	APOM	O95445	188 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	MGP	P08493	103 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	OR5AL1	P0C617	328 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	XCL1	P47992	114 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	RPL18A	Q02543	176 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	RASL11A	Q6T310	242 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	SMIM12	Q96EX1	92 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	FMC1	Q96HJ9	113 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	RPP21	Q9H633	154 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365	NAT8B	Q9UHF3	227 aa		4.97	□□□□□ -1.61
LINC00649-208	ENST00000596365		A0A1B0GV90	55 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365		F2Z2F3	143 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	CCL25	O15444	150 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	SST	P61278	116 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	UBE2G1	P62253	170 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	SUMO4	Q6EEV6	95 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	MRPL54	Q6P161	138 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	RNASEK	Q6P5S7	137 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	TEX43	Q6ZNM6	134 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	MRPL52	Q86TS9	123 aa	Known RBP	4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	KRTAP11-1	Q8IUC1	163 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	NUP35	Q8NFH5	326 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	RETNLB	Q9BQ08	111 aa		4.96	□□□□□ -1.62
LINC00649-208	ENST00000596365	IGLV7-46	A0A075B6I9	117 aa		4.95	□□□□□ -1.62
LINC00649-208	ENST00000596365	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-208	ENST00000596365	APCS	P02743	223 aa		4.95	□□□□□ -1.62
LINC00649-208	ENST00000596365	KIAA1644	Q3SXP7	199 aa		4.95	□□□□□ -1.62
LINC00649-208	ENST00000596365	ATP5L2	Q7Z4Y8	100 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms