RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 IGHV3-64A0A075B6Q5 118 aa11.75□□□□□ -0.53
ZNF558-204ENST00000596172 FA2HQ7L5A8 372 aa11.75□□□□□ -0.53
ZNF558-204ENST00000596172 C2orf88Q9BSF0 95 aa11.75□□□□□ -0.53
ZNF558-204ENST00000596172 CHAC1Q9BUX1 264 aa11.75□□□□□ -0.53
ZNF558-204ENST00000596172 ERASQ7Z444 233 aa11.74□□□□□ -0.53
ZNF558-204ENST00000596172 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
ZNF558-204ENST00000596172 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
ZNF558-204ENST00000596172 C18orf32Q8TCD1 76 aa11.74□□□□□ -0.53
ZNF558-204ENST00000596172 ZNF561-AS1K7EIQ3 104 aa11.73□□□□□ -0.53
ZNF558-204ENST00000596172 APOMO95445 188 aa11.73□□□□□ -0.53
ZNF558-204ENST00000596172 UBE2D1P51668 147 aa11.73□□□□□ -0.53
ZNF558-204ENST00000596172 LINC00242Q5T6M2 205 aa11.73□□□□□ -0.53
ZNF558-204ENST00000596172 LINC00173Q6ZV60 143 aa11.73□□□□□ -0.53
ZNF558-204ENST00000596172 HAMPP81172 84 aa11.72□□□□□ -0.53
ZNF558-204ENST00000596172 FAM19A3Q7Z5A8 133 aa11.72□□□□□ -0.53
ZNF558-204ENST00000596172 SCGB3A1Q96QR1 104 aa11.72□□□□□ -0.53
ZNF558-204ENST00000596172 KRTAP4-5Q9BYR2 181 aa11.72□□□□□ -0.53
ZNF558-204ENST00000596172 ABCA13Q86UQ4 5058 aa11.72□□□□□ -0.53
ZNF558-204ENST00000596172 LINC00614P0C842 121 aa11.71□□□□□ -0.53
ZNF558-204ENST00000596172 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
ZNF558-204ENST00000596172 OR10D4PQ8NGN7 298 aa11.71□□□□□ -0.53
ZNF558-204ENST00000596172 PCLOQ9Y6V0 5065 aa11.71□□□□□ -0.54
ZNF558-204ENST00000596172 A0A087WZ39 114 aa11.7□□□□□ -0.54
ZNF558-204ENST00000596172 RAB5BP61020 215 aa11.7□□□□□ -0.54
ZNF558-204ENST00000596172 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
ZNF558-204ENST00000596172 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
ZNF558-204ENST00000596172 URB1-AS1Q96HZ7 61 aa11.7□□□□□ -0.54
ZNF558-204ENST00000596172 C2orf48Q96LS8 159 aa11.7□□□□□ -0.54
ZNF558-204ENST00000596172 IGLV4-69A0A075B6H9 119 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 EPM2AB3EWF7 344 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 SMR3BP02814 79 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-204ENST00000596172 COX6A2Q02221 97 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 ZC2HC1BQ5TFG8 222 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 LINC00526Q96FQ7 95 aa11.69□□□□□ -0.54
ZNF558-204ENST00000596172 F8WDY8 70 aa11.68□□□□□ -0.54
ZNF558-204ENST00000596172 SEC11AP67812 179 aa11.68□□□□□ -0.54
ZNF558-204ENST00000596172 CARD19Q96LW7 228 aa11.68□□□□□ -0.54
ZNF558-204ENST00000596172 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
ZNF558-204ENST00000596172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
ZNF558-204ENST00000596172 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
ZNF558-204ENST00000596172 VPS13BQ7Z7G8 4022 aa11.66□□□□□ -0.54
ZNF558-204ENST00000596172 SPAG11BQ08648 103 aa11.66□□□□□ -0.54
ZNF558-204ENST00000596172 A0A096LNJ9 63 aa11.65□□□□□ -0.54
ZNF558-204ENST00000596172 PANO1I0J062 215 aa11.65□□□□□ -0.54
ZNF558-204ENST00000596172 HERVK_113P63121 156 aa11.65□□□□□ -0.54
ZNF558-204ENST00000596172 Q5VSD8 79 aa11.65□□□□□ -0.54
ZNF558-204ENST00000596172 ORAOV1Q8WV07 137 aa11.65□□□□□ -0.54
ZNF558-204ENST00000596172 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
ZNF558-204ENST00000596172 COLCA2A8K830 154 aa11.64□□□□□ -0.55
ZNF558-204ENST00000596172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.64□□□□□ -0.55
ZNF558-204ENST00000596172 HBDP02042 147 aa11.64□□□□□ -0.55
ZNF558-204ENST00000596172 RNF151Q2KHN1 245 aa11.64□□□□□ -0.55
ZNF558-204ENST00000596172 SPACA4Q8TDM5 124 aa11.64□□□□□ -0.55
ZNF558-204ENST00000596172 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
ZNF558-204ENST00000596172 Q6ZRU5 148 aa11.63□□□□□ -0.55
ZNF558-204ENST00000596172 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
ZNF558-204ENST00000596172 TRGC2P03986 189 aa11.62□□□□□ -0.55
ZNF558-204ENST00000596172 KIAA0087Q14695 138 aa11.62□□□□□ -0.55
ZNF558-204ENST00000596172 PMVKQ15126 192 aa11.62□□□□□ -0.55
ZNF558-204ENST00000596172 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
ZNF558-204ENST00000596172 GEMIN7Q9H840 131 aaKnown RBP11.62□□□□□ -0.55
ZNF558-204ENST00000596172 LINC00474Q9P2X8 69 aa11.62□□□□□ -0.55
ZNF558-204ENST00000596172 SRRM2Q9UQ35 2752 aaKnown RBP11.61□□□□□ -0.55
ZNF558-204ENST00000596172 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
ZNF558-204ENST00000596172 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
ZNF558-204ENST00000596172 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
ZNF558-204ENST00000596172 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
ZNF558-204ENST00000596172 MRPL35Q9NZE8 188 aaKnown RBP11.61□□□□□ -0.55
ZNF558-204ENST00000596172 DPH3Q96FX2 82 aa11.6□□□□□ -0.55
ZNF558-204ENST00000596172 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
ZNF558-204ENST00000596172 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 A0A087WYN8 130 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 NDUFA1O15239 70 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 ATP5LO75964 103 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 PMCHL1Q16048 86 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 PLAC8Q9NZF1 115 aa11.59□□□□□ -0.55
ZNF558-204ENST00000596172 A0A096LNI7 61 aa11.58□□□□□ -0.56
ZNF558-204ENST00000596172 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
ZNF558-204ENST00000596172 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
ZNF558-204ENST00000596172 MAJINQ3KP22 176 aa11.57□□□□□ -0.56
ZNF558-204ENST00000596172 PTTG1IPP53801 180 aa11.56□□□□□ -0.56
ZNF558-204ENST00000596172 UNQ6190/PRO20217Q6UXQ8 127 aa11.56□□□□□ -0.56
ZNF558-204ENST00000596172 BAGE3Q86Y29 109 aa11.56□□□□□ -0.56
ZNF558-204ENST00000596172 LINC00469Q8N7U9 141 aa11.56□□□□□ -0.56
ZNF558-204ENST00000596172 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
ZNF558-204ENST00000596172 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
ZNF558-204ENST00000596172 Q8IZM0 81 aa11.55□□□□□ -0.56
ZNF558-204ENST00000596172 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
ZNF558-204ENST00000596172 PRSS2P07478 247 aa11.54□□□□□ -0.56
ZNF558-204ENST00000596172 TLX1NBP0CAT3 122 aa11.54□□□□□ -0.56
ZNF558-204ENST00000596172 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
ZNF558-204ENST00000596172 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
ZNF558-204ENST00000596172 HSBP1O75506 76 aa11.53□□□□□ -0.56
ZNF558-204ENST00000596172 SCO1O75880 301 aa11.53□□□□□ -0.56
ZNF558-204ENST00000596172 INAFM2P0DMQ5 153 aa11.53□□□□□ -0.56
ZNF558-204ENST00000596172 C6orf226Q5I0X4 101 aa11.53□□□□□ -0.56
ZNF558-204ENST00000596172 STPG4Q8N801 248 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms