RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 G0S2P27469 103 aa12.88□□□□□ -0.35
PNKP-207ENST00000596014 REG3AQ06141 175 aa12.88□□□□□ -0.35
PNKP-207ENST00000596014 RMI2Q96E14 147 aa12.88□□□□□ -0.35
PNKP-207ENST00000596014 IGKV2D-24A0A075B6R9 120 aa12.87□□□□□ -0.35
PNKP-207ENST00000596014 DPM2O94777 84 aa12.87□□□□□ -0.35
PNKP-207ENST00000596014 IGKCP01834 107 aa12.87□□□□□ -0.35
PNKP-207ENST00000596014 COX8AP10176 69 aa12.87□□□□□ -0.35
PNKP-207ENST00000596014 MIAQ16674 131 aa12.87□□□□□ -0.35
PNKP-207ENST00000596014 TMEM101Q96IK0 257 aa12.87□□□□□ -0.35
PNKP-207ENST00000596014 A0A1B0GVY2 172 aa12.86□□□□□ -0.35
PNKP-207ENST00000596014 COX11Q9Y6N1 276 aa12.86□□□□□ -0.35
PNKP-207ENST00000596014 ERASQ7Z444 233 aa12.86□□□□□ -0.35
PNKP-207ENST00000596014 STPG4Q8N801 248 aa12.86□□□□□ -0.35
PNKP-207ENST00000596014 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
PNKP-207ENST00000596014 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
PNKP-207ENST00000596014 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
PNKP-207ENST00000596014 C1orf43Q9BWL3 253 aa12.85□□□□□ -0.35
PNKP-207ENST00000596014 UBE2D4Q9Y2X8 147 aa12.85□□□□□ -0.35
PNKP-207ENST00000596014 F8VRH5 84 aa12.84□□□□□ -0.35
PNKP-207ENST00000596014 RPL39P62891 51 aaKnown RBP12.84□□□□□ -0.35
PNKP-207ENST00000596014 SMAGPQ0VAQ4 97 aa12.84□□□□□ -0.35
PNKP-207ENST00000596014 DGAT2L7PQ6IED9 249 aa12.84□□□□□ -0.35
PNKP-207ENST00000596014 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
PNKP-207ENST00000596014 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
PNKP-207ENST00000596014 PLNP26678 52 aa12.83□□□□□ -0.35
PNKP-207ENST00000596014 BATFQ16520 125 aa12.83□□□□□ -0.35
PNKP-207ENST00000596014 MAPKAPK5-AS1Q8N8E1 139 aa12.83□□□□□ -0.35
PNKP-207ENST00000596014 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.35
PNKP-207ENST00000596014 A0A087WTM6 91 aa12.83□□□□□ -0.36
PNKP-207ENST00000596014 A0A1B0GV90 55 aa12.83□□□□□ -0.36
PNKP-207ENST00000596014 PKHD1P08F94 4074 aa12.83□□□□□ -0.36
PNKP-207ENST00000596014 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
PNKP-207ENST00000596014 TIMM17AQ99595 171 aa12.82□□□□□ -0.36
PNKP-207ENST00000596014 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
PNKP-207ENST00000596014 IGLV10-54A0A075B6I4 117 aa12.81□□□□□ -0.36
PNKP-207ENST00000596014 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
PNKP-207ENST00000596014 IGKV3OR2-268A0A0C4DH90 116 aa12.81□□□□□ -0.36
PNKP-207ENST00000596014 TMEM141Q96I45 108 aa12.81□□□□□ -0.36
PNKP-207ENST00000596014 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 KRTAP26-1Q6PEX3 210 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 NMUP48645 174 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 C2orf91Q6ZV80 131 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 SPANXA1Q9NS26 97 aa12.8□□□□□ -0.36
PNKP-207ENST00000596014 DLEU1O43261 78 aa12.78□□□□□ -0.36
PNKP-207ENST00000596014 HINT1P49773 126 aaPredicted RBP12.78□□□□□ -0.36
PNKP-207ENST00000596014 Q6ZUT4 128 aa12.77□□□□□ -0.36
PNKP-207ENST00000596014 FAM104AQ969W3 186 aa12.77□□□□□ -0.36
PNKP-207ENST00000596014 IGKV2D-26A0A0A0MRZ7 120 aa12.77□□□□□ -0.37
PNKP-207ENST00000596014 WFDC2Q14508 124 aa12.77□□□□□ -0.37
PNKP-207ENST00000596014 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
PNKP-207ENST00000596014 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.37
PNKP-207ENST00000596014 OPRPNQ99935 248 aaPredicted RBP12.77□□□□□ -0.37
PNKP-207ENST00000596014 PYGO1Q9Y3Y4 419 aa12.77□□□□□ -0.37
PNKP-207ENST00000596014 DNAH5Q8TE73 4624 aa12.76□□□□□ -0.37
PNKP-207ENST00000596014 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
PNKP-207ENST00000596014 LECT2O14960 151 aa12.76□□□□□ -0.37
PNKP-207ENST00000596014 PMVKQ15126 192 aa12.76□□□□□ -0.37
PNKP-207ENST00000596014 COL5A1-AS1Q5SY13 56 aa12.76□□□□□ -0.37
PNKP-207ENST00000596014 PCP2Q8IVA1 136 aa12.76□□□□□ -0.37
PNKP-207ENST00000596014 MRPS36P82909 103 aaKnown RBP12.75□□□□□ -0.37
PNKP-207ENST00000596014 KRTAP10-2P60368 255 aa12.74□□□□□ -0.37
PNKP-207ENST00000596014 CHCHD10Q8WYQ3 142 aaPredicted RBP12.74□□□□□ -0.37
PNKP-207ENST00000596014 DYNC1H1Q14204 4646 aaKnown RBP12.74□□□□□ -0.37
PNKP-207ENST00000596014 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
PNKP-207ENST00000596014 Q8N814 137 aa12.73□□□□□ -0.37
PNKP-207ENST00000596014 SS18Q15532 418 aa12.73□□□□□ -0.37
PNKP-207ENST00000596014 CST9LQ9H4G1 147 aa12.73□□□□□ -0.37
PNKP-207ENST00000596014 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
PNKP-207ENST00000596014 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
PNKP-207ENST00000596014 IGLV4-3A0A075B6K6 122 aa12.71□□□□□ -0.37
PNKP-207ENST00000596014 BVES-AS1Q5T3Y7 98 aa12.71□□□□□ -0.37
PNKP-207ENST00000596014 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.37
PNKP-207ENST00000596014 TRAV13-1A0A0B4J241 112 aa12.7□□□□□ -0.38
PNKP-207ENST00000596014 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
PNKP-207ENST00000596014 CCL25O15444 150 aa12.7□□□□□ -0.38
PNKP-207ENST00000596014 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.38
PNKP-207ENST00000596014 XCL1P47992 114 aa12.7□□□□□ -0.38
PNKP-207ENST00000596014 USP17L23D6RBM5 183 aa12.7□□□□□ -0.38
PNKP-207ENST00000596014 TTTY13Q9BZ97 58 aa12.7□□□□□ -0.38
PNKP-207ENST00000596014 NPSP0C0P6 89 aa12.69□□□□□ -0.38
PNKP-207ENST00000596014 HSD52Q0P140 79 aa12.69□□□□□ -0.38
PNKP-207ENST00000596014 FOXI1Q12951 378 aa12.68□□□□□ -0.38
PNKP-207ENST00000596014 E9PLD3 99 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 CD164L2Q6UWJ8 174 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 HIGD1BQ9P298 99 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 LRP1BQ9NZR2 4599 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 BIRC6Q9NR09 4857 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 C14orf177Q52M58 125 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
PNKP-207ENST00000596014 VCX2Q9H322 139 aa12.67□□□□□ -0.38
PNKP-207ENST00000596014 C16orf90A8MZG2 172 aa12.66□□□□□ -0.38
PNKP-207ENST00000596014 HERVK_113P61574 105 aa12.66□□□□□ -0.38
PNKP-207ENST00000596014 AMELXQ99217 191 aa12.66□□□□□ -0.38
PNKP-207ENST00000596014 CHAC1Q9BUX1 264 aa12.66□□□□□ -0.38
PNKP-207ENST00000596014 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
PNKP-207ENST00000596014 IGLV5-52A0A0A0MRZ9 124 aa12.64□□□□□ -0.39
PNKP-207ENST00000596014 CFAP161Q6P656 301 aa12.63□□□□□ -0.39
PNKP-207ENST00000596014 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms