RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 CCL25O15444 150 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 REG3AQ06141 175 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 CLPSL2Q6UWE3 100 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 CHAC1Q9BUX1 264 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 VAMP8Q9BV40 100 aa8.86□□□□□ -0.99
SHKBP1-209ENST00000595803 hDV102S1A0JD36 115 aa8.85□□□□□ -0.99
SHKBP1-209ENST00000595803 CRPP02741 224 aa8.85□□□□□ -0.99
SHKBP1-209ENST00000595803 HERVK_113P63121 156 aa8.85□□□□□ -0.99
SHKBP1-209ENST00000595803 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
SHKBP1-209ENST00000595803 FAM19A3Q7Z5A8 133 aa8.85□□□□□ -0.99
SHKBP1-209ENST00000595803 KRTAP4-5Q9BYR2 181 aa8.85□□□□□ -0.99
SHKBP1-209ENST00000595803 HERVK_113P61574 105 aa8.84□□□□□ -0.99
SHKBP1-209ENST00000595803 STPG4Q8N801 248 aa8.84□□□□□ -0.99
SHKBP1-209ENST00000595803 UBE2WQ96B02 151 aa8.84□□□□□ -0.99
SHKBP1-209ENST00000595803 H3BRM9 83 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
SHKBP1-209ENST00000595803 COX6A2Q02221 97 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 MAJINQ3KP22 176 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 ENHOQ6UWT2 76 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 LINC00469Q8N7U9 141 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 PRR34Q9NV39 138 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
SHKBP1-209ENST00000595803 TRAV8-4A0A0B4J246 113 aa8.82□□□□□ -1
SHKBP1-209ENST00000595803 SPATA45Q537H7 98 aa8.82□□□□□ -1
SHKBP1-209ENST00000595803 C10orf126Q8N4M7 172 aa8.82□□□□□ -1
SHKBP1-209ENST00000595803 PKHD1P08F94 4074 aa8.81□□□□□ -1
SHKBP1-209ENST00000595803 XCL1P47992 114 aa8.81□□□□□ -1
SHKBP1-209ENST00000595803 MIAQ16674 131 aa8.81□□□□□ -1
SHKBP1-209ENST00000595803 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
SHKBP1-209ENST00000595803 IGLV10-54A0A075B6I4 117 aa8.8□□□□□ -1
SHKBP1-209ENST00000595803 TMEM223A0PJW6 202 aa8.8□□□□□ -1
SHKBP1-209ENST00000595803 IBA57-AS1B1ANH7 110 aa8.8□□□□□ -1
SHKBP1-209ENST00000595803 K7EP13 123 aa8.8□□□□□ -1
SHKBP1-209ENST00000595803 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
SHKBP1-209ENST00000595803 IGLV5-45A0A087WSX0 123 aa8.79□□□□□ -1
SHKBP1-209ENST00000595803 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
SHKBP1-209ENST00000595803 GAGE12HA6NDE8 117 aa8.79□□□□□ -1
SHKBP1-209ENST00000595803 ANKRD39Q53RE8 183 aa8.79□□□□□ -1
SHKBP1-209ENST00000595803 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
SHKBP1-209ENST00000595803 C5orf38Q86SI9 138 aa8.79□□□□□ -1
SHKBP1-209ENST00000595803 IGHV3OR16-9A0A0B4J2B5 98 aa8.78□□□□□ -1
SHKBP1-209ENST00000595803 E9PLD3 99 aa8.78□□□□□ -1
SHKBP1-209ENST00000595803 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 COX7A2LO14548 114 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 SPINK8P0C7L1 97 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 NMUP48645 174 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 RMI2Q96E14 147 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 C1orf43Q9BWL3 253 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 PRO1933Q9H354 126 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 Q9HAA7 133 aa8.77□□□□□ -1.01
SHKBP1-209ENST00000595803 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 A0A087WZ39 114 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 IGHV1-58A0A0C4DH39 117 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 LEPROTO15243 131 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 MALP21145 153 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 PLEKHB2Q96CS7 222 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 HERC1Q15751 4861 aa8.76□□□□□ -1.01
SHKBP1-209ENST00000595803 IGKV2D-26A0A0A0MRZ7 120 aa8.75□□□□□ -1.01
SHKBP1-209ENST00000595803 LGALS3P17931 250 aaKnown RBP8.75□□□□□ -1.01
SHKBP1-209ENST00000595803 FOXI1Q12951 378 aa8.75□□□□□ -1.01
SHKBP1-209ENST00000595803 TTC32Q5I0X7 151 aa8.75□□□□□ -1.01
SHKBP1-209ENST00000595803 C14orf144Q96I85 54 aa8.75□□□□□ -1.01
SHKBP1-209ENST00000595803 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 TSTD3H0UI37 97 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 J3QQQ9 107 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 APOMO95445 188 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 COX8AP10176 69 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 TM2D2Q9BX73 214 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 COX11Q9Y6N1 276 aa8.73□□□□□ -1.01
SHKBP1-209ENST00000595803 SLC25A34Q6PIV7 304 aa8.72□□□□□ -1.01
SHKBP1-209ENST00000595803 PCP2Q8IVA1 136 aa8.72□□□□□ -1.01
SHKBP1-209ENST00000595803 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
SHKBP1-209ENST00000595803 UQCR10Q9UDW1 63 aa8.72□□□□□ -1.01
SHKBP1-209ENST00000595803 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.02
SHKBP1-209ENST00000595803 PRSS2P07478 247 aa8.71□□□□□ -1.02
SHKBP1-209ENST00000595803 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
SHKBP1-209ENST00000595803 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.02
SHKBP1-209ENST00000595803 COX7B2Q8TF08 81 aa8.71□□□□□ -1.02
SHKBP1-209ENST00000595803 MIEN1Q9BRT3 115 aa8.71□□□□□ -1.02
SHKBP1-209ENST00000595803 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 ZNF815PA8K554 130 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 M0R2N4 97 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 DLEU1O43261 78 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 BOD1L2Q8IYS8 172 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 ORAOV1Q8WV07 137 aa8.7□□□□□ -1.02
SHKBP1-209ENST00000595803 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
SHKBP1-209ENST00000595803 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
SHKBP1-209ENST00000595803 TTTY13Q9BZ97 58 aa8.69□□□□□ -1.02
SHKBP1-209ENST00000595803 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
SHKBP1-209ENST00000595803 VPS13DQ5THJ4 4388 aa8.67□□□□□ -1.02
SHKBP1-209ENST00000595803 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
SHKBP1-209ENST00000595803 PCP4L1A6NKN8 68 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms