RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 UBE2D1P51668 147 aa8.88□□□□□ -0.99
SHKBP1-207ENST00000595631 LINC00242Q5T6M2 205 aa8.88□□□□□ -0.99
SHKBP1-207ENST00000595631 Q6ZN92 141 aa8.88□□□□□ -0.99
SHKBP1-207ENST00000595631 SCGB3A1Q96QR1 104 aa8.88□□□□□ -0.99
SHKBP1-207ENST00000595631 AMELXQ99217 191 aa8.88□□□□□ -0.99
SHKBP1-207ENST00000595631 RYR1P21817 5038 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 A0A096LNJ9 63 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 PMCHL1Q16048 86 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 C2orf88Q9BSF0 95 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 VCX2Q9H322 139 aa8.87□□□□□ -0.99
SHKBP1-207ENST00000595631 PANO1I0J062 215 aa8.86□□□□□ -0.99
SHKBP1-207ENST00000595631 LINC00614P0C842 121 aa8.86□□□□□ -0.99
SHKBP1-207ENST00000595631 G0S2P27469 103 aa8.86□□□□□ -0.99
SHKBP1-207ENST00000595631 SCXQ7RTU7 201 aa8.86□□□□□ -0.99
SHKBP1-207ENST00000595631 ERASQ7Z444 233 aa8.86□□□□□ -0.99
SHKBP1-207ENST00000595631 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
SHKBP1-207ENST00000595631 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 COLCA2A8K830 154 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 TRGC2P03986 189 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 NPSP0C0P6 89 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 Q8N1X5 172 aa8.85□□□□□ -0.99
SHKBP1-207ENST00000595631 IGHV3-64A0A075B6Q5 118 aa8.84□□□□□ -0.99
SHKBP1-207ENST00000595631 CHTF8P0CG12 524 aa8.84□□□□□ -0.99
SHKBP1-207ENST00000595631 ORAOV1Q8WV07 137 aa8.84□□□□□ -0.99
SHKBP1-207ENST00000595631 SPAG11BQ08648 103 aa8.83□□□□□ -1
SHKBP1-207ENST00000595631 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
SHKBP1-207ENST00000595631 CARD19Q96LW7 228 aa8.83□□□□□ -1
SHKBP1-207ENST00000595631 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
SHKBP1-207ENST00000595631 A0A087WZ39 114 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 A0A0J9YXV3 536 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 APOMO95445 188 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 HBDP02042 147 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 SYCNQ0VAF6 134 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 PAPPA-AS1Q5QFB9 102 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 Q6ZRU5 148 aa8.82□□□□□ -1
SHKBP1-207ENST00000595631 RAB5BP61020 215 aa8.81□□□□□ -1
SHKBP1-207ENST00000595631 FAM19A3Q7Z5A8 133 aa8.81□□□□□ -1
SHKBP1-207ENST00000595631 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
SHKBP1-207ENST00000595631 LINC01549A6NIU2 74 aa8.8□□□□□ -1
SHKBP1-207ENST00000595631 PDZD11Q5EBL8 140 aa8.8□□□□□ -1
SHKBP1-207ENST00000595631 Q5VSD8 79 aa8.8□□□□□ -1
SHKBP1-207ENST00000595631 OR10D4PQ8NGN7 298 aa8.8□□□□□ -1
SHKBP1-207ENST00000595631 CST9LQ9H4G1 147 aa8.8□□□□□ -1
SHKBP1-207ENST00000595631 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
SHKBP1-207ENST00000595631 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.79□□□□□ -1
SHKBP1-207ENST00000595631 PMVKQ15126 192 aa8.79□□□□□ -1
SHKBP1-207ENST00000595631 BAGE3Q86Y29 109 aa8.79□□□□□ -1
SHKBP1-207ENST00000595631 GEMIN7Q9H840 131 aaKnown RBP8.79□□□□□ -1
SHKBP1-207ENST00000595631 CDKN2A-AS1Q9UH64 79 aa8.79□□□□□ -1
SHKBP1-207ENST00000595631 A0A096LNI7 61 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 EPM2AB3EWF7 344 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 NDUFA6P56556 154 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 LINC00310P59036 64 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 HERVK_113P63121 156 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 KIAA0087Q14695 138 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 C10orf25Q5T742 122 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 CHCHD1Q96BP2 118 aaKnown RBP8.78□□□□□ -1
SHKBP1-207ENST00000595631 C2orf48Q96LS8 159 aa8.78□□□□□ -1
SHKBP1-207ENST00000595631 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
SHKBP1-207ENST00000595631 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
SHKBP1-207ENST00000595631 FAM19A2Q8N3H0 131 aa8.77□□□□□ -1.01
SHKBP1-207ENST00000595631 SPACA4Q8TDM5 124 aa8.77□□□□□ -1.01
SHKBP1-207ENST00000595631 TINCRA0A1B0GVN0 87 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 SERF1AO75920 110 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 SEC11AP67812 179 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 C2orf82Q6UX34 121 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 UNQ6190/PRO20217Q6UXQ8 127 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 LINC00469Q8N7U9 141 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 DPH3Q96FX2 82 aa8.76□□□□□ -1.01
SHKBP1-207ENST00000595631 FAT1Q14517 4588 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 A0A087WYN8 130 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 NUPR1O60356 82 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 HSBP1O75506 76 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 ATP5LO75964 103 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
SHKBP1-207ENST00000595631 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
SHKBP1-207ENST00000595631 NDUFA1O15239 70 aa8.74□□□□□ -1.01
SHKBP1-207ENST00000595631 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
SHKBP1-207ENST00000595631 PACRGQ96M98 296 aaPredicted RBP8.74□□□□□ -1.01
SHKBP1-207ENST00000595631 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
SHKBP1-207ENST00000595631 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
SHKBP1-207ENST00000595631 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
SHKBP1-207ENST00000595631 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
SHKBP1-207ENST00000595631 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
SHKBP1-207ENST00000595631 IGLC3P0DOY3 106 aa8.73□□□□□ -1.01
SHKBP1-207ENST00000595631 MRPL35Q9NZE8 188 aaKnown RBP8.73□□□□□ -1.01
SHKBP1-207ENST00000595631 F8WDY8 70 aa8.72□□□□□ -1.01
SHKBP1-207ENST00000595631 PRSS2P07478 247 aa8.72□□□□□ -1.01
SHKBP1-207ENST00000595631 PTTG1IPP53801 180 aa8.72□□□□□ -1.01
SHKBP1-207ENST00000595631 RPL18AQ02543 176 aaKnown RBP8.72□□□□□ -1.01
SHKBP1-207ENST00000595631 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
SHKBP1-207ENST00000595631 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms