RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 CCL25O15444 150 aa12.28□□□□□ -0.44
GRAMD1A-205ENST00000595596 G0S2P27469 103 aa12.28□□□□□ -0.44
GRAMD1A-205ENST00000595596 XCL1P47992 114 aa12.28□□□□□ -0.44
GRAMD1A-205ENST00000595596 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
GRAMD1A-205ENST00000595596 LINC00614P0C842 121 aa12.27□□□□□ -0.45
GRAMD1A-205ENST00000595596 RPL37AP61513 92 aaKnown RBP12.27□□□□□ -0.45
GRAMD1A-205ENST00000595596 TMEM141Q96I45 108 aa12.27□□□□□ -0.45
GRAMD1A-205ENST00000595596 AP5S1Q9NUS5 200 aa12.27□□□□□ -0.45
GRAMD1A-205ENST00000595596 LRP1Q07954 4544 aaKnown RBP12.27□□□□□ -0.45
GRAMD1A-205ENST00000595596 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
GRAMD1A-205ENST00000595596 S100A1P23297 94 aa12.26□□□□□ -0.45
GRAMD1A-205ENST00000595596 FOXI1Q12951 378 aa12.26□□□□□ -0.45
GRAMD1A-205ENST00000595596 IFITM10A6NMD0 228 aa12.25□□□□□ -0.45
GRAMD1A-205ENST00000595596 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
GRAMD1A-205ENST00000595596 RAB5BP61020 215 aa12.24□□□□□ -0.45
GRAMD1A-205ENST00000595596 ZC2HC1BQ5TFG8 222 aa12.24□□□□□ -0.45
GRAMD1A-205ENST00000595596 PMCHL1Q16048 86 aa12.23□□□□□ -0.45
GRAMD1A-205ENST00000595596 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
GRAMD1A-205ENST00000595596 Q6ZN92 141 aa12.23□□□□□ -0.45
GRAMD1A-205ENST00000595596 TEX43Q6ZNM6 134 aa12.23□□□□□ -0.45
GRAMD1A-205ENST00000595596 SCGB3A1Q96QR1 104 aa12.23□□□□□ -0.45
GRAMD1A-205ENST00000595596 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
GRAMD1A-205ENST00000595596 A0A096LNJ9 63 aa12.22□□□□□ -0.45
GRAMD1A-205ENST00000595596 NPSP0C0P6 89 aa12.22□□□□□ -0.45
GRAMD1A-205ENST00000595596 LINC00173Q6ZV60 143 aa12.22□□□□□ -0.45
GRAMD1A-205ENST00000595596 ERASQ7Z444 233 aa12.22□□□□□ -0.45
GRAMD1A-205ENST00000595596 LINC01549A6NIU2 74 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 PRSS1P07477 247 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 BAGE3Q86Y29 109 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 C15orf56Q8N910 161 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 AMELXQ99217 191 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 C2orf88Q9BSF0 95 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 VCX2Q9H322 139 aa12.21□□□□□ -0.45
GRAMD1A-205ENST00000595596 HBDP02042 147 aa12.2□□□□□ -0.46
GRAMD1A-205ENST00000595596 HMCN2Q8NDA2 5059 aa12.2□□□□□ -0.46
GRAMD1A-205ENST00000595596 PAPPA-AS1Q5QFB9 102 aa12.19□□□□□ -0.46
GRAMD1A-205ENST00000595596 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
GRAMD1A-205ENST00000595596 FAT3Q8TDW7 4589 aa12.19□□□□□ -0.46
GRAMD1A-205ENST00000595596 hDV102S1A0JD36 115 aa12.18□□□□□ -0.46
GRAMD1A-205ENST00000595596 UBE2D1P51668 147 aa12.18□□□□□ -0.46
GRAMD1A-205ENST00000595596 HIGD2BQ4VC39 106 aa12.18□□□□□ -0.46
GRAMD1A-205ENST00000595596 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
GRAMD1A-205ENST00000595596 COX7A2LO14548 114 aa12.17□□□□□ -0.46
GRAMD1A-205ENST00000595596 LINC00242Q5T6M2 205 aa12.17□□□□□ -0.46
GRAMD1A-205ENST00000595596 C5orf38Q86SI9 138 aa12.17□□□□□ -0.46
GRAMD1A-205ENST00000595596 C9orf163Q8N9P6 203 aa12.17□□□□□ -0.46
GRAMD1A-205ENST00000595596 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
GRAMD1A-205ENST00000595596 MALP21145 153 aa12.16□□□□□ -0.46
GRAMD1A-205ENST00000595596 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
GRAMD1A-205ENST00000595596 PDZD11Q5EBL8 140 aa12.16□□□□□ -0.46
GRAMD1A-205ENST00000595596 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.15□□□□□ -0.46
GRAMD1A-205ENST00000595596 LINC00310P59036 64 aa12.15□□□□□ -0.46
GRAMD1A-205ENST00000595596 COX6A2Q02221 97 aa12.15□□□□□ -0.46
GRAMD1A-205ENST00000595596 PKHD1L1Q86WI1 4243 aa12.15□□□□□ -0.46
GRAMD1A-205ENST00000595596 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
GRAMD1A-205ENST00000595596 HSBP1O75506 76 aa12.14□□□□□ -0.47
GRAMD1A-205ENST00000595596 SERF1AO75920 110 aa12.14□□□□□ -0.47
GRAMD1A-205ENST00000595596 Q6ZRU5 148 aa12.14□□□□□ -0.47
GRAMD1A-205ENST00000595596 UBR4Q5T4S7 5183 aa12.13□□□□□ -0.47
GRAMD1A-205ENST00000595596 GVQW2A0A096LPI5 108 aaPredicted RBP12.13□□□□□ -0.47
GRAMD1A-205ENST00000595596 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BKO60814 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BJP06899 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BOP23527 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BBP33778 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BDP58876 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BCP62807 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 PMVKQ15126 192 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST2H2BEQ16778 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BHQ93079 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BNQ99877 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 HIST1H2BMQ99879 126 aa12.12□□□□□ -0.47
GRAMD1A-205ENST00000595596 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 NUPR1O60356 82 aa12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 ATP5LO75964 103 aa12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 SLPIP03973 132 aa12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 SDIM1Q6ZPB5 146 aa12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 CST9LQ9H4G1 147 aa12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.11□□□□□ -0.47
GRAMD1A-205ENST00000595596 APOMO95445 188 aa12.1□□□□□ -0.47
GRAMD1A-205ENST00000595596 MT1HL1P0DM35 61 aa12.1□□□□□ -0.47
GRAMD1A-205ENST00000595596 NDUFA6P56556 154 aa12.1□□□□□ -0.47
GRAMD1A-205ENST00000595596 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
GRAMD1A-205ENST00000595596 A0A087WZ39 114 aa12.09□□□□□ -0.47
GRAMD1A-205ENST00000595596 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
GRAMD1A-205ENST00000595596 HERVK_113P63121 156 aa12.08□□□□□ -0.48
GRAMD1A-205ENST00000595596 SEC11AP67812 179 aa12.08□□□□□ -0.48
GRAMD1A-205ENST00000595596 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
GRAMD1A-205ENST00000595596 DPH3Q96FX2 82 aa12.08□□□□□ -0.48
GRAMD1A-205ENST00000595596 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
GRAMD1A-205ENST00000595596 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
GRAMD1A-205ENST00000595596 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
GRAMD1A-205ENST00000595596 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
GRAMD1A-205ENST00000595596 SPAG11BQ08648 103 aa12.07□□□□□ -0.48
GRAMD1A-205ENST00000595596 TINCRA0A1B0GVN0 87 aa12.06□□□□□ -0.48
GRAMD1A-205ENST00000595596 CIRBPQ14011 172 aaKnown RBP12.06□□□□□ -0.48
GRAMD1A-205ENST00000595596 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms