RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
TMEM38A-202ENST00000595452 DPH3Q96FX2 82 aa8.82□□□□□ -1
TMEM38A-202ENST00000595452 TMEM141Q96I45 108 aa8.82□□□□□ -1
TMEM38A-202ENST00000595452 KRTAP4-5Q9BYR2 181 aa8.82□□□□□ -1
TMEM38A-202ENST00000595452 LINC01549A6NIU2 74 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 TRGC2P03986 189 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 NPSP0C0P6 89 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 TEX43Q6ZNM6 134 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 PRSS3P2Q8NHM4 247 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 CIRBP-AS1Q8TBR5 109 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 CARD19Q96LW7 228 aa8.81□□□□□ -1
TMEM38A-202ENST00000595452 FAT1Q14517 4588 aa8.8□□□□□ -1
TMEM38A-202ENST00000595452 INAFM2P0DMQ5 153 aa8.8□□□□□ -1
TMEM38A-202ENST00000595452 SDIM1Q6ZPB5 146 aa8.8□□□□□ -1
TMEM38A-202ENST00000595452 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
TMEM38A-202ENST00000595452 RAB5BP61020 215 aa8.79□□□□□ -1
TMEM38A-202ENST00000595452 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
TMEM38A-202ENST00000595452 SYCNQ0VAF6 134 aa8.78□□□□□ -1
TMEM38A-202ENST00000595452 OR10D4PQ8NGN7 298 aa8.78□□□□□ -1
TMEM38A-202ENST00000595452 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 SPAG11BQ08648 103 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 FA2HQ7L5A8 372 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 C5orf38Q86SI9 138 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 C18orf32Q8TCD1 76 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 VCX2Q9H322 139 aa8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
TMEM38A-202ENST00000595452 IGLV4-69A0A075B6H9 119 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 F8WDY8 70 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 SLPIP03973 132 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 SEC11AP67812 179 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 COX6A2Q02221 97 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 CIRBPQ14011 172 aaKnown RBP8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 C2orf48Q96LS8 159 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
TMEM38A-202ENST00000595452 LINC00614P0C842 121 aa8.75□□□□□ -1.01
TMEM38A-202ENST00000595452 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
TMEM38A-202ENST00000595452 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
TMEM38A-202ENST00000595452 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
TMEM38A-202ENST00000595452 IGHV3OR16-9A0A0B4J2B5 98 aa8.74□□□□□ -1.01
TMEM38A-202ENST00000595452 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
TMEM38A-202ENST00000595452 LINC01546A6NGU7 62 aa8.74□□□□□ -1.01
TMEM38A-202ENST00000595452 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
TMEM38A-202ENST00000595452 TOMM6Q96B49 74 aa8.74□□□□□ -1.01
TMEM38A-202ENST00000595452 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
TMEM38A-202ENST00000595452 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
TMEM38A-202ENST00000595452 MAJINQ3KP22 176 aa8.73□□□□□ -1.01
TMEM38A-202ENST00000595452 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
TMEM38A-202ENST00000595452 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
TMEM38A-202ENST00000595452 A0A087WYN8 130 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 A0A087WZ39 114 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 NDUFA1O15239 70 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 CHTF8P0CG12 524 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 UBE2D1P51668 147 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 ERASQ7Z444 233 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 CHCHD1Q96BP2 118 aaKnown RBP8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
TMEM38A-202ENST00000595452 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 HERVK_113P63121 156 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 LINC00242Q5T6M2 205 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 Q6ZRU5 148 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 PACRGQ96M98 296 aaPredicted RBP8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 AMELXQ99217 191 aa8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 GEMIN7Q9H840 131 aaKnown RBP8.71□□□□□ -1.02
TMEM38A-202ENST00000595452 A0A096LNI7 61 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 PRSS2P07478 247 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 RNF151Q2KHN1 245 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 STPG4Q8N801 248 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
TMEM38A-202ENST00000595452 PANO1I0J062 215 aa8.69□□□□□ -1.02
TMEM38A-202ENST00000595452 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
TMEM38A-202ENST00000595452 RPL18AQ02543 176 aaKnown RBP8.68□□□□□ -1.02
TMEM38A-202ENST00000595452 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
TMEM38A-202ENST00000595452 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
TMEM38A-202ENST00000595452 HSBP1O75506 76 aa8.67□□□□□ -1.02
TMEM38A-202ENST00000595452 PTTG1IPP53801 180 aa8.67□□□□□ -1.02
TMEM38A-202ENST00000595452 GAGE2BQ13066 116 aa8.67□□□□□ -1.02
TMEM38A-202ENST00000595452 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
TMEM38A-202ENST00000595452 FAM19A3Q7Z5A8 133 aa8.67□□□□□ -1.02
TMEM38A-202ENST00000595452 HBDP02042 147 aa8.66□□□□□ -1.02
TMEM38A-202ENST00000595452 CKS1BP61024 79 aa8.66□□□□□ -1.02
TMEM38A-202ENST00000595452 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
TMEM38A-202ENST00000595452 SERF1AO75920 110 aa8.65□□□□□ -1.02
TMEM38A-202ENST00000595452 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms