RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 UBE2D4Q9Y2X8 147 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 TRGV2A0A075B6R0 118 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
SCAF1-202ENST00000595242 MRPS36P82909 103 aaKnown RBP8.77□□□□□ -1.01
SCAF1-202ENST00000595242 HSD52Q0P140 79 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 FHL2Q14192 279 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 MPV17L2Q567V2 206 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 TMEM97Q5BJF2 176 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 BVES-AS1Q5T3Y7 98 aa8.77□□□□□ -1.01
SCAF1-202ENST00000595242 LYRM9A8MSI8 78 aa8.76□□□□□ -1.01
SCAF1-202ENST00000595242 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
SCAF1-202ENST00000595242 HERVK_113P61574 105 aa8.75□□□□□ -1.01
SCAF1-202ENST00000595242 BATFQ16520 125 aa8.75□□□□□ -1.01
SCAF1-202ENST00000595242 OPRPNQ99935 248 aaPredicted RBP8.75□□□□□ -1.01
SCAF1-202ENST00000595242 VCX2Q9H322 139 aa8.75□□□□□ -1.01
SCAF1-202ENST00000595242 CSDC2Q9Y534 153 aaKnown RBP8.75□□□□□ -1.01
SCAF1-202ENST00000595242 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
SCAF1-202ENST00000595242 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
SCAF1-202ENST00000595242 CHAC1Q9BUX1 264 aa8.74□□□□□ -1.01
SCAF1-202ENST00000595242 TRBV25-1A0A075B6N4 114 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
SCAF1-202ENST00000595242 TRGV4A0A0C4DH28 118 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
SCAF1-202ENST00000595242 GAGE12JA6NER3 117 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
SCAF1-202ENST00000595242 F5H768 121 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 H7C423 109 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 SEC11AP67812 179 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 SMAGPQ0VAQ4 97 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 GAGE1Q13065 139 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 GAGE4Q13068 117 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 GAGE5Q13069 117 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 TAL2Q16559 108 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 GAGE13Q4V321 117 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 PRADC1Q9BSG0 188 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
SCAF1-202ENST00000595242 MYMXA0A1B0GTQ4 84 aa8.72□□□□□ -1.01
SCAF1-202ENST00000595242 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
SCAF1-202ENST00000595242 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
SCAF1-202ENST00000595242 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
SCAF1-202ENST00000595242 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
SCAF1-202ENST00000595242 TINCRA0A1B0GVN0 87 aa8.71□□□□□ -1.02
SCAF1-202ENST00000595242 DEFB130BP0DP73 79 aa8.71□□□□□ -1.02
SCAF1-202ENST00000595242 DEFB130AP0DP74 79 aa8.71□□□□□ -1.02
SCAF1-202ENST00000595242 Q6ZUT4 128 aa8.71□□□□□ -1.02
SCAF1-202ENST00000595242 ORAOV1Q8WV07 137 aa8.71□□□□□ -1.02
SCAF1-202ENST00000595242 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
SCAF1-202ENST00000595242 HAMPP81172 84 aa8.7□□□□□ -1.02
SCAF1-202ENST00000595242 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
SCAF1-202ENST00000595242 Q6ZRN7 208 aaPredicted RBP8.7□□□□□ -1.02
SCAF1-202ENST00000595242 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 LOC100131303A0A0U1RQF7 123 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 LEPROTO15243 131 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 UBE2D1P51668 147 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 TIRAPP58753 221 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 TMEM243Q9BU79 118 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 PRO0255Q9UI72 69 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
SCAF1-202ENST00000595242 ZNF25P17030 456 aaPredicted RBP8.68□□□□□ -1.02
SCAF1-202ENST00000595242 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
SCAF1-202ENST00000595242 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
SCAF1-202ENST00000595242 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 A6NDN8 102 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 ATP5G1P05496 136 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 TSPEAR-AS2P59090 65 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 LRP1Q07954 4544 aaKnown RBP8.67□□□□□ -1.02
SCAF1-202ENST00000595242 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
SCAF1-202ENST00000595242 J3QQQ9 107 aa8.66□□□□□ -1.02
SCAF1-202ENST00000595242 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
SCAF1-202ENST00000595242 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
SCAF1-202ENST00000595242 GCSHP23434 173 aa8.65□□□□□ -1.02
SCAF1-202ENST00000595242 ESRGQ1W209 222 aa8.65□□□□□ -1.02
SCAF1-202ENST00000595242 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
SCAF1-202ENST00000595242 CEND1Q8N111 149 aa8.65□□□□□ -1.02
SCAF1-202ENST00000595242 OR5A1Q8NGJ0 315 aa8.65□□□□□ -1.02
SCAF1-202ENST00000595242 SPANXB1Q9NS25 103 aaPredicted RBP8.65□□□□□ -1.02
SCAF1-202ENST00000595242 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 H3BRM9 83 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 UBE2L6O14933 153 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 GYPEP15421 78 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
SCAF1-202ENST00000595242 HERVK_113P63121 156 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 ATP6V0E2Q8NHE4 81 aa8.64□□□□□ -1.03
SCAF1-202ENST00000595242 A0A0J9YY99 117 aa8.63□□□□□ -1.03
SCAF1-202ENST00000595242 DNAH10OSP0CZ25 163 aa8.63□□□□□ -1.03
SCAF1-202ENST00000595242 FXYD2P54710 66 aa8.63□□□□□ -1.03
SCAF1-202ENST00000595242 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
SCAF1-202ENST00000595242 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
SCAF1-202ENST00000595242 VSIG2Q96IQ7 327 aa8.63□□□□□ -1.03
SCAF1-202ENST00000595242 A0A087WTM6 91 aa8.62□□□□□ -1.03
SCAF1-202ENST00000595242 PAX4O43316 350 aa8.62□□□□□ -1.03
SCAF1-202ENST00000595242 IGHV3-30-3P0DP02 117 aa8.62□□□□□ -1.03
SCAF1-202ENST00000595242 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms