RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 LGALS3P17931 250 aaKnown RBP9.23□□□□□ -0.93
VRK3-205ENST00000593919 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 AMELXQ99217 191 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 B9D2Q9BPU9 175 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 UBE2D4Q9Y2X8 147 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 TRAV26-1A0A087WT03 109 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 J3QQQ9 107 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 GTF2H5Q6ZYL4 71 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
VRK3-205ENST00000593919 K7EP34 96 aa9.22□□□□□ -0.93
VRK3-205ENST00000593919 LEPROTO15243 131 aa9.22□□□□□ -0.93
VRK3-205ENST00000593919 NANOS2P60321 138 aaKnown RBP9.22□□□□□ -0.93
VRK3-205ENST00000593919 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
VRK3-205ENST00000593919 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
VRK3-205ENST00000593919 Q6ZUT4 128 aa9.22□□□□□ -0.93
VRK3-205ENST00000593919 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
VRK3-205ENST00000593919 FABP2P12104 132 aa9.21□□□□□ -0.93
VRK3-205ENST00000593919 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.93
VRK3-205ENST00000593919 GTSF1LQ9H1H1 148 aa9.2□□□□□ -0.94
VRK3-205ENST00000593919 A0A096LPF7 62 aa9.19□□□□□ -0.94
VRK3-205ENST00000593919 IGLL5B9A064 214 aa9.19□□□□□ -0.94
VRK3-205ENST00000593919 MRPS36P82909 103 aaKnown RBP9.19□□□□□ -0.94
VRK3-205ENST00000593919 ATP6V0E2Q8NHE4 81 aa9.19□□□□□ -0.94
VRK3-205ENST00000593919 OR5A1Q8NGJ0 315 aa9.18□□□□□ -0.94
VRK3-205ENST00000593919 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
VRK3-205ENST00000593919 TRBV6-8A0A0A6YYG3 113 aa9.17□□□□□ -0.94
VRK3-205ENST00000593919 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
VRK3-205ENST00000593919 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
VRK3-205ENST00000593919 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
VRK3-205ENST00000593919 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
VRK3-205ENST00000593919 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
VRK3-205ENST00000593919 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
VRK3-205ENST00000593919 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
VRK3-205ENST00000593919 TMEM243Q9BU79 118 aa9.16□□□□□ -0.94
VRK3-205ENST00000593919 ICOSQ9Y6W8 199 aa9.16□□□□□ -0.94
VRK3-205ENST00000593919 GEMIN7Q9H840 131 aaKnown RBP9.15□□□□□ -0.94
VRK3-205ENST00000593919 APOMO95445 188 aa9.15□□□□□ -0.95
VRK3-205ENST00000593919 IGHV3-30P01768 117 aa9.15□□□□□ -0.95
VRK3-205ENST00000593919 SPINK8P0C7L1 97 aa9.15□□□□□ -0.95
VRK3-205ENST00000593919 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.95
VRK3-205ENST00000593919 UBE2D1P51668 147 aa9.15□□□□□ -0.95
VRK3-205ENST00000593919 H3BNG1 76 aa9.14□□□□□ -0.95
VRK3-205ENST00000593919 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
VRK3-205ENST00000593919 UBE2L6O14933 153 aa9.13□□□□□ -0.95
VRK3-205ENST00000593919 C10orf126Q8N4M7 172 aa9.13□□□□□ -0.95
VRK3-205ENST00000593919 CSMD3Q7Z407 3707 aa9.13□□□□□ -0.95
VRK3-205ENST00000593919 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
VRK3-205ENST00000593919 DNAH7Q8WXX0 4024 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 SH2D6Q7Z4S9 175 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 CHCHD5Q9BSY4 110 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 FBN3Q75N90 2809 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 H7C423 109 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 GAGE6Q13070 117 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
VRK3-205ENST00000593919 COX6A2Q02221 97 aa9.11□□□□□ -0.95
VRK3-205ENST00000593919 NDUFA12Q9UI09 145 aa9.11□□□□□ -0.95
VRK3-205ENST00000593919 CSDC2Q9Y534 153 aaKnown RBP9.11□□□□□ -0.95
VRK3-205ENST00000593919 TSPAN13O95857 204 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 CFC1P0CG37 223 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 SFTA2Q6UW10 78 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 MUSTN1Q8IVN3 82 aa9.1□□□□□ -0.95
VRK3-205ENST00000593919 J3QL48 77 aa9.09□□□□□ -0.95
VRK3-205ENST00000593919 LINC00242Q5T6M2 205 aa9.09□□□□□ -0.95
VRK3-205ENST00000593919 LYSTQ99698 3801 aa9.09□□□□□ -0.96
VRK3-205ENST00000593919 IGLV5-45A0A087WSX0 123 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 H3BMG7 143 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 HERVK_113P63121 156 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 LYPD5Q6UWN5 251 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 CDC42SE2Q9NRR3 84 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 IGLV4-60A0A075B6I1 120 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 LELP1Q5T871 98 aa9.08□□□□□ -0.96
VRK3-205ENST00000593919 LOC107984156A0A0G2JMH3 177 aa9.07□□□□□ -0.96
VRK3-205ENST00000593919 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
VRK3-205ENST00000593919 RPL24P83731 157 aaKnown RBP9.07□□□□□ -0.96
VRK3-205ENST00000593919 ZFAND6Q6FIF0 208 aa9.07□□□□□ -0.96
VRK3-205ENST00000593919 ARL17AQ8IVW1 177 aa9.07□□□□□ -0.96
VRK3-205ENST00000593919 LITAFQ99732 161 aa9.07□□□□□ -0.96
VRK3-205ENST00000593919 TGP01266 2768 aa9.06□□□□□ -0.96
VRK3-205ENST00000593919 MTURNQ8N3F0 131 aa9.06□□□□□ -0.96
VRK3-205ENST00000593919 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
VRK3-205ENST00000593919 A0A1B0GUV1 79 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 PRSS2P07478 247 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 NPC2P61916 151 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 ADAMTSL4-AS1Q5T5F5 129 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 FAM19A3Q7Z5A8 133 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 Q8N3U1 123 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
VRK3-205ENST00000593919 ESRGQ1W209 222 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
VRK3-205ENST00000593919 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 SMIM1B2RUZ4 78 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 SCGB1A1P11684 91 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 PSMB2P49721 201 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms