RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 JPT2Q9H910 190 aa13.58□□□□□ -0.23
LSM4-203ENST00000593829 VPS13DQ5THJ4 4388 aa13.58□□□□□ -0.24
LSM4-203ENST00000593829 TRBV20-1A0A075B6N2 111 aa13.58□□□□□ -0.24
LSM4-203ENST00000593829 C11orf86A6NJI1 115 aa13.58□□□□□ -0.24
LSM4-203ENST00000593829 TSHBP01222 138 aa13.58□□□□□ -0.24
LSM4-203ENST00000593829 MRPL23Q16540 153 aaKnown RBP13.58□□□□□ -0.24
LSM4-203ENST00000593829 NACAE9PAV3 2078 aa13.57□□□□□ -0.24
LSM4-203ENST00000593829 HYDINQ4G0P3 5121 aa13.57□□□□□ -0.24
LSM4-203ENST00000593829 GYPEP15421 78 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 SLC25A29Q8N8R3 303 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 TRBV6-5A0A0K0K1A5 114 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 TRBV6-4A0A1B0GX49 114 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 K7EQD1 137 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 RHODO00212 210 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 VCYO14598 125 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 LINC00588Q9Y4M8 146 aa13.56□□□□□ -0.24
LSM4-203ENST00000593829 ESRGQ1W209 222 aa13.55□□□□□ -0.24
LSM4-203ENST00000593829 CDIP1Q9H305 208 aa13.55□□□□□ -0.24
LSM4-203ENST00000593829 RHOHQ15669 191 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 FAM74A4Q5TZK3 123 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 PPDPFLQ8WWR9 84 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 A0A087WWL8 130 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 M0QXV9 152 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 IGHV3-30P01768 117 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 IGHV3-30-5P0DP03 117 aa13.54□□□□□ -0.24
LSM4-203ENST00000593829 PSMB2P49721 201 aa13.53□□□□□ -0.24
LSM4-203ENST00000593829 TEN1Q86WV5 123 aa13.53□□□□□ -0.24
LSM4-203ENST00000593829 TRBV27A0A0K0K1C4 114 aa13.52□□□□□ -0.24
LSM4-203ENST00000593829 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.24
LSM4-203ENST00000593829 NFE4Q86UQ8 179 aa13.52□□□□□ -0.24
LSM4-203ENST00000593829 KIR2DL4Q99706 377 aa13.52□□□□□ -0.24
LSM4-203ENST00000593829 Q6ZSN1 163 aa13.52□□□□□ -0.25
LSM4-203ENST00000593829 C10orf126Q8N4M7 172 aa13.52□□□□□ -0.25
LSM4-203ENST00000593829 KMT2AQ03164 3969 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 LOC107984156A0A0G2JMH3 177 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 CKS1BP61024 79 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 SUMO4Q6EEV6 95 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 ARL17AQ8IVW1 177 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 AMELXQ99217 191 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 ZNRF2Q8NHG8 242 aa13.51□□□□□ -0.25
LSM4-203ENST00000593829 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
LSM4-203ENST00000593829 CFC1P0CG37 223 aa13.5□□□□□ -0.25
LSM4-203ENST00000593829 LYPD5Q6UWN5 251 aa13.5□□□□□ -0.25
LSM4-203ENST00000593829 CARD19Q96LW7 228 aa13.49□□□□□ -0.25
LSM4-203ENST00000593829 TCL1BO95988 128 aa13.49□□□□□ -0.25
LSM4-203ENST00000593829 UPK3BQ9BT76 320 aa13.49□□□□□ -0.25
LSM4-203ENST00000593829 PRO1854Q9UHT4 67 aa13.49□□□□□ -0.25
LSM4-203ENST00000593829 TSPEAR-AS2P59090 65 aa13.48□□□□□ -0.25
LSM4-203ENST00000593829 J3QQQ9 107 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 Q9H8V8 135 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 SDHAF1A6NFY7 115 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 M0R2N4 97 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 LEPROTO15243 131 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 Q6ZUT4 128 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 LINC01600Q96MT4 127 aa13.47□□□□□ -0.25
LSM4-203ENST00000593829 ZNF56Q15929 161 aa13.46□□□□□ -0.25
LSM4-203ENST00000593829 A0A0B4J2C4 111 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 SPINK8P0C7L1 97 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 LGALS3P17931 250 aaKnown RBP13.45□□□□□ -0.26
LSM4-203ENST00000593829 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
LSM4-203ENST00000593829 TMEM170BQ5T4T1 132 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 GAGE12JA6NER3 117 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 GAGE4Q13068 117 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 GAGE5Q13069 117 aa13.45□□□□□ -0.26
LSM4-203ENST00000593829 DNAH6Q9C0G6 4158 aa13.44□□□□□ -0.26
LSM4-203ENST00000593829 TRBV10-1A0A0K0K1A3 114 aa13.44□□□□□ -0.26
LSM4-203ENST00000593829 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
LSM4-203ENST00000593829 F5H697 171 aa13.44□□□□□ -0.26
LSM4-203ENST00000593829 TIRAPP58753 221 aa13.44□□□□□ -0.26
LSM4-203ENST00000593829 Q9UF83 564 aa13.44□□□□□ -0.26
LSM4-203ENST00000593829 Q6ZR54 194 aa13.43□□□□□ -0.26
LSM4-203ENST00000593829 NBDYA0A0U1RRE5 68 aa13.43□□□□□ -0.26
LSM4-203ENST00000593829 LINC00694P0DN24 101 aa13.42□□□□□ -0.26
LSM4-203ENST00000593829 XGP55808 180 aa13.42□□□□□ -0.26
LSM4-203ENST00000593829 GEMIN7Q9H840 131 aaKnown RBP13.42□□□□□ -0.26
LSM4-203ENST00000593829 M0QY20 66 aa13.41□□□□□ -0.26
LSM4-203ENST00000593829 IGHV3-33P01772 117 aa13.41□□□□□ -0.26
LSM4-203ENST00000593829 MT-ATP8P03928 68 aa13.41□□□□□ -0.26
LSM4-203ENST00000593829 RPL36AP83881 106 aaKnown RBP13.41□□□□□ -0.26
LSM4-203ENST00000593829 RPL36ALQ969Q0 106 aaKnown RBP13.41□□□□□ -0.26
LSM4-203ENST00000593829 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.4□□□□□ -0.26
LSM4-203ENST00000593829 ANKRD29Q8N6D5 301 aa13.4□□□□□ -0.26
LSM4-203ENST00000593829 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
LSM4-203ENST00000593829 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
LSM4-203ENST00000593829 A4D1N5 150 aa13.39□□□□□ -0.27
LSM4-203ENST00000593829 SCGB1C2P0DMR2 95 aa13.39□□□□□ -0.27
LSM4-203ENST00000593829 TTC32Q5I0X7 151 aa13.39□□□□□ -0.27
LSM4-203ENST00000593829 SLC25A20O43772 301 aa13.38□□□□□ -0.27
LSM4-203ENST00000593829 ZNF22P17026 224 aaPredicted RBP13.38□□□□□ -0.27
LSM4-203ENST00000593829 ERG28Q9UKR5 140 aa13.38□□□□□ -0.27
LSM4-203ENST00000593829 LELP1Q5T871 98 aa13.37□□□□□ -0.27
LSM4-203ENST00000593829 EIF4EBP3O60516 100 aaPredicted RBP13.37□□□□□ -0.27
LSM4-203ENST00000593829 WFDC10BQ8IUB3 73 aa13.37□□□□□ -0.27
LSM4-203ENST00000593829 I3L3M4 83 aa13.36□□□□□ -0.27
LSM4-203ENST00000593829 PYGO1Q9Y3Y4 419 aa13.36□□□□□ -0.27
LSM4-203ENST00000593829 C1orf134Q5TEV5 83 aa13.35□□□□□ -0.27
LSM4-203ENST00000593829 IGLV4-3A0A075B6K6 122 aa13.34□□□□□ -0.27
LSM4-203ENST00000593829 KRTAP1-5Q9BYS1 174 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms