RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.94
VMP1-217ENST00000593168 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
VMP1-217ENST00000593168 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.94
VMP1-217ENST00000593168 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.94
VMP1-217ENST00000593168 HERVK_113P63121 156 aa9.15□□□□□ -0.94
VMP1-217ENST00000593168 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
VMP1-217ENST00000593168 TSTD3H0UI37 97 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 HERVK_113P61574 105 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 LINC01556Q5JQF7 62 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 Q8N3U1 123 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
VMP1-217ENST00000593168 ABCA13Q86UQ4 5058 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 E9PLD3 99 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 COX6A2Q02221 97 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 REG3AQ06141 175 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 SS18Q15532 418 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 PRO1933Q9H354 126 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
VMP1-217ENST00000593168 IGKV3OR2-268A0A0C4DH90 116 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 TMEM223A0PJW6 202 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 H3BRM9 83 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 IGHV3-30P01768 117 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 IGHV3-33P01772 117 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 IGHV3-30-3P0DP02 117 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 IGHV3-30-5P0DP03 117 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 KLK12Q9UKR0 248 aa9.12□□□□□ -0.95
VMP1-217ENST00000593168 SIVA1O15304 175 aa9.11□□□□□ -0.95
VMP1-217ENST00000593168 IGKV2D-26A0A0A0MRZ7 120 aa9.1□□□□□ -0.95
VMP1-217ENST00000593168 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
VMP1-217ENST00000593168 COX8AP10176 69 aa9.1□□□□□ -0.95
VMP1-217ENST00000593168 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
VMP1-217ENST00000593168 UQCR10Q9UDW1 63 aa9.1□□□□□ -0.95
VMP1-217ENST00000593168 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 IGHV1-58A0A0C4DH39 117 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 DLEU1O43261 78 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 NMUP48645 174 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 CLPSL2Q6UWE3 100 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 ENHOQ6UWT2 76 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 MIEN1Q9BRT3 115 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 DNAH17Q9UFH2 4485 aa9.09□□□□□ -0.95
VMP1-217ENST00000593168 FAT2Q9NYQ8 4349 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 LEPROTO15243 131 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 CRPP02741 224 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 MIAQ16674 131 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 BOD1L2Q8IYS8 172 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 LINC01561Q8N1V8 128 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
VMP1-217ENST00000593168 PLEKHB2Q96CS7 222 aa9.08□□□□□ -0.96
VMP1-217ENST00000593168 DNAH2Q9P225 4427 aa9.07□□□□□ -0.96
VMP1-217ENST00000593168 A0A087WZ39 114 aa9.07□□□□□ -0.96
VMP1-217ENST00000593168 K7EP13 123 aa9.07□□□□□ -0.96
VMP1-217ENST00000593168 PCP2Q8IVA1 136 aa9.07□□□□□ -0.96
VMP1-217ENST00000593168 UBE2WQ96B02 151 aa9.07□□□□□ -0.96
VMP1-217ENST00000593168 Q9H8V8 135 aa9.07□□□□□ -0.96
VMP1-217ENST00000593168 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
VMP1-217ENST00000593168 J3QQQ9 107 aa9.06□□□□□ -0.96
VMP1-217ENST00000593168 SPINK8P0C7L1 97 aa9.06□□□□□ -0.96
VMP1-217ENST00000593168 XCL1P47992 114 aa9.06□□□□□ -0.96
VMP1-217ENST00000593168 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
VMP1-217ENST00000593168 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
VMP1-217ENST00000593168 DYNC1H1Q14204 4646 aaKnown RBP9.06□□□□□ -0.96
VMP1-217ENST00000593168 PKHD1P08F94 4074 aa9.05□□□□□ -0.96
VMP1-217ENST00000593168 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
VMP1-217ENST00000593168 PCP4L1A6NKN8 68 aa9.05□□□□□ -0.96
VMP1-217ENST00000593168 IBA57-AS1B1ANH7 110 aa9.05□□□□□ -0.96
VMP1-217ENST00000593168 SMIM1B2RUZ4 78 aa9.05□□□□□ -0.96
VMP1-217ENST00000593168 IGLV10-54A0A075B6I4 117 aa9.04□□□□□ -0.96
VMP1-217ENST00000593168 LGALS3P17931 250 aaKnown RBP9.04□□□□□ -0.96
VMP1-217ENST00000593168 DDTP30046 118 aa9.04□□□□□ -0.96
VMP1-217ENST00000593168 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
VMP1-217ENST00000593168 MAPKAPK5-AS1Q8N8E1 139 aa9.04□□□□□ -0.96
VMP1-217ENST00000593168 IGHV3-64A0A075B6Q5 118 aa9.03□□□□□ -0.96
VMP1-217ENST00000593168 COX7A2LO14548 114 aa9.03□□□□□ -0.96
VMP1-217ENST00000593168 TSPEAR-AS2P59090 65 aa9.03□□□□□ -0.96
VMP1-217ENST00000593168 FOXI1Q12951 378 aa9.03□□□□□ -0.96
VMP1-217ENST00000593168 TTTY13Q9BZ97 58 aa9.03□□□□□ -0.96
VMP1-217ENST00000593168 MYMXA0A1B0GTQ4 84 aa9.02□□□□□ -0.97
VMP1-217ENST00000593168 GAGE12HA6NDE8 117 aa9.02□□□□□ -0.97
VMP1-217ENST00000593168 DNAH11Q96DT5 4516 aa9.02□□□□□ -0.97
VMP1-217ENST00000593168 ZNF815PA8K554 130 aa9.01□□□□□ -0.97
VMP1-217ENST00000593168 HNRNPA3P51991 378 aaKnown RBP9.01□□□□□ -0.97
VMP1-217ENST00000593168 KRTAP26-1Q6PEX3 210 aa9.01□□□□□ -0.97
VMP1-217ENST00000593168 C1orf43Q9BWL3 253 aa9.01□□□□□ -0.97
VMP1-217ENST00000593168 PKD1P98161 4303 aa9.01□□□□□ -0.97
VMP1-217ENST00000593168 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
VMP1-217ENST00000593168 HIGD1BQ9P298 99 aa9□□□□□ -0.97
VMP1-217ENST00000593168 TP73-AS1Q9UF72 201 aa9□□□□□ -0.97
VMP1-217ENST00000593168 APOMO95445 188 aa8.99□□□□□ -0.97
VMP1-217ENST00000593168 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
VMP1-217ENST00000593168 RMI2Q96E14 147 aa8.99□□□□□ -0.97
VMP1-217ENST00000593168 NDUFA12Q9UI09 145 aa8.99□□□□□ -0.97
VMP1-217ENST00000593168 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
VMP1-217ENST00000593168 NDUFA1O15239 70 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms