RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 TMEM61Q8N0U2 210 aa9.63□□□□□ -0.87
GFAP-221ENST00000592065 IGHV3-73A0A0B4J1V6 119 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 IGHV1-58A0A0C4DH39 117 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 DYNLRB2Q8TF09 96 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
GFAP-221ENST00000592065 CSMD3Q7Z407 3707 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 TRBV30A0A0K0K1B3 111 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 KNCNA6PVL3 124 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 H7C2G1 150 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
GFAP-221ENST00000592065 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
GFAP-221ENST00000592065 TRAV8-3A0A0A6YYJ7 113 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 IGHV4-30-4P0DP06 118 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 LINC01587Q99440 93 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 CHCHD7Q9BUK0 85 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 H3BMM0 161 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 ATXN8Q156A1 80 aa9.61□□□□□ -0.87
GFAP-221ENST00000592065 RBMY1BA6NDE4 496 aaKnown RBP9.6□□□□□ -0.87
GFAP-221ENST00000592065 RBMY1EA6NEQ0 496 aaKnown RBP9.6□□□□□ -0.87
GFAP-221ENST00000592065 RBMY1DP0C7P1 496 aaKnown RBP9.6□□□□□ -0.87
GFAP-221ENST00000592065 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 VSIG2Q96IQ7 327 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 Q9UF83 564 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 HTN1P15515 57 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 DEFB131AP59861 70 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 Q1RN00 199 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 ADAMTSL4-AS1Q5T5F5 129 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 NDUFA12Q9UI09 145 aa9.6□□□□□ -0.87
GFAP-221ENST00000592065 TRIAP1O43715 76 aa9.59□□□□□ -0.87
GFAP-221ENST00000592065 Q6ZSN1 163 aa9.59□□□□□ -0.87
GFAP-221ENST00000592065 RNASE13Q5GAN3 156 aaKnown RBP9.59□□□□□ -0.87
GFAP-221ENST00000592065 PRM2P04554 102 aa9.58□□□□□ -0.88
GFAP-221ENST00000592065 SMIM9A6NGZ8 99 aa9.58□□□□□ -0.88
GFAP-221ENST00000592065 ZNF415Q09FC8 603 aa9.58□□□□□ -0.88
GFAP-221ENST00000592065 MIAQ16674 131 aa9.58□□□□□ -0.88
GFAP-221ENST00000592065 RETNQ9HD89 108 aa9.58□□□□□ -0.88
GFAP-221ENST00000592065 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
GFAP-221ENST00000592065 PRSS2P07478 247 aa9.57□□□□□ -0.88
GFAP-221ENST00000592065 RPL13AP40429 203 aaKnown RBP9.57□□□□□ -0.88
GFAP-221ENST00000592065 C11orf72Q8NBR9 251 aa9.57□□□□□ -0.88
GFAP-221ENST00000592065 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
GFAP-221ENST00000592065 TENM2Q9NT68 2774 aa9.57□□□□□ -0.88
GFAP-221ENST00000592065 IGHV3-53P01767 116 aa9.56□□□□□ -0.88
GFAP-221ENST00000592065 LINC00467Q9BRT7 94 aa9.56□□□□□ -0.88
GFAP-221ENST00000592065 A8MZ25 164 aa9.56□□□□□ -0.88
GFAP-221ENST00000592065 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
GFAP-221ENST00000592065 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.55□□□□□ -0.88
GFAP-221ENST00000592065 IGKV2-29A2NJV5 120 aaPredicted RBP9.55□□□□□ -0.88
GFAP-221ENST00000592065 TIMM17BO60830 172 aa9.55□□□□□ -0.88
GFAP-221ENST00000592065 MRPL23Q16540 153 aaKnown RBP9.55□□□□□ -0.88
GFAP-221ENST00000592065 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
GFAP-221ENST00000592065 LINC00694P0DN24 101 aa9.53□□□□□ -0.88
GFAP-221ENST00000592065 TIRAPP58753 221 aa9.53□□□□□ -0.88
GFAP-221ENST00000592065 C15orf53Q8NAA6 179 aa9.53□□□□□ -0.88
GFAP-221ENST00000592065 MAP6D1Q9H9H5 199 aa9.53□□□□□ -0.88
GFAP-221ENST00000592065 TEX49A0A1B0GTD5 131 aa9.53□□□□□ -0.88
GFAP-221ENST00000592065 RS1O15537 224 aa9.53□□□□□ -0.88
GFAP-221ENST00000592065 H7C423 109 aa9.52□□□□□ -0.88
GFAP-221ENST00000592065 NDUFA1O15239 70 aa9.52□□□□□ -0.88
GFAP-221ENST00000592065 CDKN2A-AS1Q9UH64 79 aa9.52□□□□□ -0.88
GFAP-221ENST00000592065 IGHV3-38A0A0C4DH36 116 aa9.52□□□□□ -0.89
GFAP-221ENST00000592065 COX6CP09669 75 aa9.52□□□□□ -0.89
GFAP-221ENST00000592065 C19orf73Q9NVV2 129 aa9.52□□□□□ -0.89
GFAP-221ENST00000592065 H3BT86 120 aa9.51□□□□□ -0.89
GFAP-221ENST00000592065 STARD9Q9P2P6 4700 aa9.51□□□□□ -0.89
GFAP-221ENST00000592065 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
GFAP-221ENST00000592065 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
GFAP-221ENST00000592065 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
GFAP-221ENST00000592065 A0A1B0GX51 115 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 LST1O00453 97 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 INSP01308 110 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 NPC2P61916 151 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
GFAP-221ENST00000592065 IGHV3OR16-12A0A075B7B8 117 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 J3KT08 172 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 COX6A2Q02221 97 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 CLEC2BQ92478 149 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 CHCHD5Q9BSY4 110 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 RYR3Q15413 4870 aa9.49□□□□□ -0.89
GFAP-221ENST00000592065 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
GFAP-221ENST00000592065 LOC107984640A0A0U1RRK4 108 aa9.48□□□□□ -0.89
GFAP-221ENST00000592065 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
GFAP-221ENST00000592065 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
GFAP-221ENST00000592065 FAM19A3Q7Z5A8 133 aa9.48□□□□□ -0.89
GFAP-221ENST00000592065 DAND5Q8N907 189 aa9.48□□□□□ -0.89
GFAP-221ENST00000592065 HERVK_113P63121 156 aa9.47□□□□□ -0.89
GFAP-221ENST00000592065 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
GFAP-221ENST00000592065 IL17DQ8TAD2 202 aa9.47□□□□□ -0.89
GFAP-221ENST00000592065 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms