RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
PRKCSH-212ENST00000591462 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
PRKCSH-212ENST00000591462 GAGE4Q13068 117 aa10.26□□□□□ -0.77
PRKCSH-212ENST00000591462 SMIM1B2RUZ4 78 aa10.25□□□□□ -0.77
PRKCSH-212ENST00000591462 DGAT2L7PQ6IED9 249 aa10.25□□□□□ -0.77
PRKCSH-212ENST00000591462 J3QLI3 93 aa10.24□□□□□ -0.77
PRKCSH-212ENST00000591462 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
PRKCSH-212ENST00000591462 Q6YL49 198 aa10.24□□□□□ -0.77
PRKCSH-212ENST00000591462 HERVK_113P63121 156 aa10.23□□□□□ -0.77
PRKCSH-212ENST00000591462 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
PRKCSH-212ENST00000591462 FSHBP01225 129 aa10.23□□□□□ -0.77
PRKCSH-212ENST00000591462 COX7A2LO14548 114 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 INSP01308 110 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 SHISA2Q6UWI4 295 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 FAM110AQ9BQ89 295 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 FAM19A3Q7Z5A8 133 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
PRKCSH-212ENST00000591462 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.77
PRKCSH-212ENST00000591462 TRBV7-7A0A0K0K1E9 115 aa10.21□□□□□ -0.78
PRKCSH-212ENST00000591462 F5H768 121 aa10.21□□□□□ -0.78
PRKCSH-212ENST00000591462 FBN1P35555 2871 aaKnown RBP10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 DEFB114Q30KQ6 69 aa10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 PRIMA1Q86XR5 153 aa10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 C1orf158Q8N1D5 194 aa10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 IL17DQ8TAD2 202 aa10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 C22orf24Q9Y442 160 aa10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 C2CD3Q4AC94 2353 aa10.2□□□□□ -0.78
PRKCSH-212ENST00000591462 SMCR5Q8TEV8 140 aa10.19□□□□□ -0.78
PRKCSH-212ENST00000591462 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
PRKCSH-212ENST00000591462 PEMTQ9UBM1 199 aa10.19□□□□□ -0.78
PRKCSH-212ENST00000591462 TRGV1A0A0A0MS02 117 aa10.19□□□□□ -0.78
PRKCSH-212ENST00000591462 DYNLRB2Q8TF09 96 aa10.19□□□□□ -0.78
PRKCSH-212ENST00000591462 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
PRKCSH-212ENST00000591462 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
PRKCSH-212ENST00000591462 MEIG1Q5JSS6 88 aa10.18□□□□□ -0.78
PRKCSH-212ENST00000591462 CSDC2Q9Y534 153 aaKnown RBP10.18□□□□□ -0.78
PRKCSH-212ENST00000591462 DAZ2Q13117 558 aaKnown RBP10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 KHDC1LQ5JSQ8 128 aa10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 Q6ZTI0 123 aa10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
PRKCSH-212ENST00000591462 K7EQD1 137 aa10.16□□□□□ -0.78
PRKCSH-212ENST00000591462 HERV-K104P63124 156 aa10.15□□□□□ -0.78
PRKCSH-212ENST00000591462 RPL36AP83881 106 aaKnown RBP10.15□□□□□ -0.78
PRKCSH-212ENST00000591462 RPL36ALQ969Q0 106 aaKnown RBP10.15□□□□□ -0.78
PRKCSH-212ENST00000591462 ATRQ13535 2644 aa10.15□□□□□ -0.78
PRKCSH-212ENST00000591462 TRACP01848 142 aa10.15□□□□□ -0.78
PRKCSH-212ENST00000591462 ACYP1P07311 99 aa10.14□□□□□ -0.79
PRKCSH-212ENST00000591462 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
PRKCSH-212ENST00000591462 TRBV10-1A0A0K0K1A3 114 aa10.13□□□□□ -0.79
PRKCSH-212ENST00000591462 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
PRKCSH-212ENST00000591462 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
PRKCSH-212ENST00000591462 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
PRKCSH-212ENST00000591462 SDIM1Q6ZPB5 146 aa10.13□□□□□ -0.79
PRKCSH-212ENST00000591462 STHQ8IWL8 128 aa10.13□□□□□ -0.79
PRKCSH-212ENST00000591462 DNAJC9-AS1A6NH13 148 aa10.11□□□□□ -0.79
PRKCSH-212ENST00000591462 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
PRKCSH-212ENST00000591462 C3orf56Q8N813 242 aa10.11□□□□□ -0.79
PRKCSH-212ENST00000591462 Q9HAA7 133 aa10.11□□□□□ -0.79
PRKCSH-212ENST00000591462 IGKV2-28A0A075B6P5 120 aa10.11□□□□□ -0.79
PRKCSH-212ENST00000591462 IGKV2D-28P01615 120 aa10.11□□□□□ -0.79
PRKCSH-212ENST00000591462 LOC100131303A0A0U1RQF7 123 aa10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 HILS1P60008 231 aa10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 MIR7-3HGQ8N6C7 128 aa10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 PPDPFQ9H3Y8 114 aa10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
PRKCSH-212ENST00000591462 RPL28P46779 137 aaKnown RBP10.09□□□□□ -0.79
PRKCSH-212ENST00000591462 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
PRKCSH-212ENST00000591462 SMIM20Q8N5G0 67 aa10.09□□□□□ -0.79
PRKCSH-212ENST00000591462 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
PRKCSH-212ENST00000591462 C11orf44Q8N8P7 122 aa10.08□□□□□ -0.8
PRKCSH-212ENST00000591462 PLAC8L1A1L4L8 177 aa10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 UBE2L6O14933 153 aa10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 COX7B2Q8TF08 81 aa10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 CRPP02741 224 aa10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 NOTCH3Q9UM47 2321 aa10.07□□□□□ -0.8
PRKCSH-212ENST00000591462 A0A087WYN8 130 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 MALP21145 153 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 TOMM7Q9P0U1 55 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 COL6A5A8TX70 2615 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 PF4P02776 101 aa10.06□□□□□ -0.8
PRKCSH-212ENST00000591462 IGLV4-60A0A075B6I1 120 aa10.05□□□□□ -0.8
PRKCSH-212ENST00000591462 TRAV25A0A0B4J276 109 aa10.05□□□□□ -0.8
PRKCSH-212ENST00000591462 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
PRKCSH-212ENST00000591462 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
PRKCSH-212ENST00000591462 WNK1Q9H4A3 2382 aa10.05□□□□□ -0.8
PRKCSH-212ENST00000591462 MDFIQ99750 246 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms