RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CHCHD7Q9BUK0 85 aa10.93□□□□□ -0.66
CIRBP-228ENST00000590347 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
CIRBP-228ENST00000590347 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
CIRBP-228ENST00000590347 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
CIRBP-228ENST00000590347 RBMY1BA6NDE4 496 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RBMY1EA6NEQ0 496 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 CRPP02741 224 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RBMY1DP0C7P1 496 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RBMY1A1P0DJD3 496 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RBMY1CP0DJD4 496 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RBMY1FQ15415 496 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 SMIM11BQ8TCY0 68 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 BRK1Q8WUW1 75 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 CCDC168Q8NDH2 2452 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 IGHV3OR16-12A0A075B7B8 117 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 AVPP01185 164 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 Q6JHZ5 121 aa10.91□□□□□ -0.66
CIRBP-228ENST00000590347 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
CIRBP-228ENST00000590347 HIST2H2BCQ6DN03 193 aa10.9□□□□□ -0.66
CIRBP-228ENST00000590347 HIST2H2BDQ6DRA6 164 aa10.9□□□□□ -0.66
CIRBP-228ENST00000590347 APRG1Q8IVJ8 170 aa10.9□□□□□ -0.66
CIRBP-228ENST00000590347 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
CIRBP-228ENST00000590347 MRAPQ8TCY5 172 aa10.9□□□□□ -0.66
CIRBP-228ENST00000590347 NAV2Q8IVL1 2488 aa10.89□□□□□ -0.67
CIRBP-228ENST00000590347 PRO0628Q9UI54 55 aa10.89□□□□□ -0.67
CIRBP-228ENST00000590347 FBN2P35556 2912 aa10.89□□□□□ -0.67
CIRBP-228ENST00000590347 CFHR3Q02985 330 aa10.89□□□□□ -0.67
CIRBP-228ENST00000590347 LINC00242Q5T6M2 205 aa10.89□□□□□ -0.67
CIRBP-228ENST00000590347 XCL1P47992 114 aa10.88□□□□□ -0.67
CIRBP-228ENST00000590347 RMI2Q96E14 147 aa10.88□□□□□ -0.67
CIRBP-228ENST00000590347 XCL2Q9UBD3 114 aa10.88□□□□□ -0.67
CIRBP-228ENST00000590347 C5orf56Q8N8D9 126 aa10.88□□□□□ -0.67
CIRBP-228ENST00000590347 NIPBLQ6KC79 2804 aaeCLIP10.88□□□□□ -0.672e-6■■■■□ 25.1
CIRBP-228ENST00000590347 ABCA2Q9BZC7 2435 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 IGKV2-28A0A075B6P5 120 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 SMIM1B2RUZ4 78 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 IGKV2D-28P01615 120 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 NDUFA4O00483 81 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 BLCAPP62952 87 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 Q6ZTI0 123 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 TIMM17BO60830 172 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 LINC00158P58513 81 aa10.87□□□□□ -0.67
CIRBP-228ENST00000590347 FAM222AQ5U5X8 452 aa10.86□□□□□ -0.67
CIRBP-228ENST00000590347 C10orf99Q6UWK7 81 aa10.86□□□□□ -0.67
CIRBP-228ENST00000590347 IGHV3-53P01767 116 aa10.86□□□□□ -0.67
CIRBP-228ENST00000590347 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
CIRBP-228ENST00000590347 FN1P02751 2386 aaKnown RBP10.86□□□□□ -0.67
CIRBP-228ENST00000590347 MPLKIPQ8TAP9 179 aa10.85□□□□□ -0.67
CIRBP-228ENST00000590347 LMO4P61968 165 aa10.85□□□□□ -0.67
CIRBP-228ENST00000590347 SS18Q15532 418 aa10.85□□□□□ -0.67
CIRBP-228ENST00000590347 Q96MF0 132 aa10.85□□□□□ -0.67
CIRBP-228ENST00000590347 FP248Q71RG6 208 aaPredicted RBP10.84□□□□□ -0.67
CIRBP-228ENST00000590347 IGHV4-61A0A0C4DH41 118 aa10.84□□□□□ -0.67
CIRBP-228ENST00000590347 C11orf72Q8NBR9 251 aa10.84□□□□□ -0.67
CIRBP-228ENST00000590347 PAX4O43316 350 aa10.83□□□□□ -0.68
CIRBP-228ENST00000590347 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
CIRBP-228ENST00000590347 SIRPDQ9H106 197 aa10.83□□□□□ -0.68
CIRBP-228ENST00000590347 MINOS1-NBL1R4GNA1 71 aa10.83□□□□□ -0.68
CIRBP-228ENST00000590347 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
CIRBP-228ENST00000590347 TMEM86BQ8N661 226 aa10.82□□□□□ -0.68
CIRBP-228ENST00000590347 RBM3P98179 157 aaKnown RBP10.82□□□□□ -0.68
CIRBP-228ENST00000590347 CCL19Q99731 98 aa10.82□□□□□ -0.68
CIRBP-228ENST00000590347 H7BZZ5 65 aa10.81□□□□□ -0.68
CIRBP-228ENST00000590347 ZNF415Q09FC8 603 aa10.81□□□□□ -0.68
CIRBP-228ENST00000590347 BBC3Q96PG8 261 aaPredicted RBP10.81□□□□□ -0.68
CIRBP-228ENST00000590347 F8WEM9 126 aa10.81□□□□□ -0.68
CIRBP-228ENST00000590347 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
CIRBP-228ENST00000590347 TRAV10A0A0B4J240 114 aa10.8□□□□□ -0.68
CIRBP-228ENST00000590347 IGHV4-30-2A0A087WSY4 118 aa10.8□□□□□ -0.68
CIRBP-228ENST00000590347 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
CIRBP-228ENST00000590347 NBEAL2Q6ZNJ1 2754 aa10.8□□□□□ -0.68
CIRBP-228ENST00000590347 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
CIRBP-228ENST00000590347 TRAV13-2A0A0B4J235 113 aa10.79□□□□□ -0.68
CIRBP-228ENST00000590347 NDUFC2O95298 119 aa10.79□□□□□ -0.68
CIRBP-228ENST00000590347 HAMPP81172 84 aa10.79□□□□□ -0.68
CIRBP-228ENST00000590347 CHD6Q8TD26 2715 aa10.79□□□□□ -0.68
CIRBP-228ENST00000590347 IGHV4-38-2P0DP08 117 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 PSMB8P28062 276 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 TEX15Q9BXT5 2789 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 M0R2N4 97 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 CCL18P55774 89 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 MXRA5Q9NR99 2828 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 C16orf95Q9H693 158 aa10.78□□□□□ -0.68
CIRBP-228ENST00000590347 SEC61GP60059 68 aa10.77□□□□□ -0.69
CIRBP-228ENST00000590347 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.69
CIRBP-228ENST00000590347 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.69
CIRBP-228ENST00000590347 NOTCH2Q04721 2471 aa10.77□□□□□ -0.69
CIRBP-228ENST00000590347 MOB4Q9Y3A3 225 aa10.76□□□□□ -0.69
CIRBP-228ENST00000590347 SERP1Q9Y6X1 66 aa10.76□□□□□ -0.69
CIRBP-228ENST00000590347 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
CIRBP-228ENST00000590347 ORMDL1Q9P0S3 153 aa10.75□□□□□ -0.69
CIRBP-228ENST00000590347 CCKP06307 115 aa10.75□□□□□ -0.69
CIRBP-228ENST00000590347 IGLV5-45A0A087WSX0 123 aa10.74□□□□□ -0.69
CIRBP-228ENST00000590347 H3BUX3 64 aa10.74□□□□□ -0.69
CIRBP-228ENST00000590347 C1orf195Q5TG92 126 aa10.74□□□□□ -0.69
CIRBP-228ENST00000590347 ACANP16112 2415 aa10.74□□□□□ -0.69
CIRBP-228ENST00000590347 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms