RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, human

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-223	ENST00000590215	UBE2D1	P51668	147 aa		12.15	□□□□□ -0.46
MBD1-223	ENST00000590215	LINC00242	Q5T6M2	205 aa		12.15	□□□□□ -0.46
MBD1-223	ENST00000590215	FAM19A3	Q7Z5A8	133 aa		12.15	□□□□□ -0.46
MBD1-223	ENST00000590215	C9orf163	Q8N9P6	203 aa		12.15	□□□□□ -0.46
MBD1-223	ENST00000590215	C2orf88	Q9BSF0	95 aa		12.15	□□□□□ -0.46
MBD1-223	ENST00000590215	SCO1	O75880	301 aa		12.14	□□□□□ -0.47
MBD1-223	ENST00000590215	LINC01620	Q4KN68	170 aa		12.13	□□□□□ -0.47
MBD1-223	ENST00000590215	HIGD2B	Q4VC39	106 aa		12.13	□□□□□ -0.47
MBD1-223	ENST00000590215	ZC2HC1B	Q5TFG8	222 aa		12.13	□□□□□ -0.47
MBD1-223	ENST00000590215		Q6ZSA8	131 aa		12.13	□□□□□ -0.47
MBD1-223	ENST00000590215	C5orf38	Q86SI9	138 aa		12.13	□□□□□ -0.47
MBD1-223	ENST00000590215	XG	P55808	180 aa		12.12	□□□□□ -0.47
MBD1-223	ENST00000590215	CHCHD1	Q96BP2	118 aa	Known RBP	12.12	□□□□□ -0.47
MBD1-223	ENST00000590215	HBD	P02042	147 aa		12.11	□□□□□ -0.47
MBD1-223	ENST00000590215	MAL	P21145	153 aa		12.11	□□□□□ -0.47
MBD1-223	ENST00000590215	COX6A2	Q02221	97 aa		12.11	□□□□□ -0.47
MBD1-223	ENST00000590215	FAM30A	Q9NZY2	134 aa		12.11	□□□□□ -0.47
MBD1-223	ENST00000590215	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.1	□□□□□ -0.47
MBD1-223	ENST00000590215	PDZD11	Q5EBL8	140 aa		12.1	□□□□□ -0.47
MBD1-223	ENST00000590215		A0A087WZ39	114 aa		12.09	□□□□□ -0.47
MBD1-223	ENST00000590215	APOM	O95445	188 aa		12.09	□□□□□ -0.47
MBD1-223	ENST00000590215	IGHV3-64	A0A075B6Q5	118 aa		12.08	□□□□□ -0.48
MBD1-223	ENST00000590215	SEC11A	P67812	179 aa		12.08	□□□□□ -0.48
MBD1-223	ENST00000590215	PMCHL1	Q16048	86 aa		12.08	□□□□□ -0.48
MBD1-223	ENST00000590215	SDIM1	Q6ZPB5	146 aa		12.08	□□□□□ -0.48
MBD1-223	ENST00000590215	LINC01561	Q8N1V8	128 aa		12.08	□□□□□ -0.48
MBD1-223	ENST00000590215	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.07	□□□□□ -0.48
MBD1-223	ENST00000590215	ZNF561-AS1	K7EIQ3	104 aa		12.07	□□□□□ -0.48
MBD1-223	ENST00000590215	OR10D4P	Q8NGN7	298 aa		12.07	□□□□□ -0.48
MBD1-223	ENST00000590215	CST9L	Q9H4G1	147 aa		12.07	□□□□□ -0.48
MBD1-223	ENST00000590215	S100A1	P23297	94 aa		12.06	□□□□□ -0.48
MBD1-223	ENST00000590215	PMVK	Q15126	192 aa		12.06	□□□□□ -0.48
MBD1-223	ENST00000590215	BAGE3	Q86Y29	109 aa		12.06	□□□□□ -0.48
MBD1-223	ENST00000590215	LINC00526	Q96FQ7	95 aa		12.06	□□□□□ -0.48
MBD1-223	ENST00000590215	IGLV4-69	A0A075B6H9	119 aa		12.05	□□□□□ -0.48
MBD1-223	ENST00000590215	ATP5L	O75964	103 aa		12.05	□□□□□ -0.48
MBD1-223	ENST00000590215	HERVK_113	P63121	156 aa		12.05	□□□□□ -0.48
MBD1-223	ENST00000590215	C2orf48	Q96LS8	159 aa		12.05	□□□□□ -0.48
MBD1-223	ENST00000590215		A0A0J9YXV3	536 aa		12.04	□□□□□ -0.48
MBD1-223	ENST00000590215	LINC00310	P59036	64 aa		12.04	□□□□□ -0.48
MBD1-223	ENST00000590215	TINCR	A0A1B0GVN0	87 aa		12.03	□□□□□ -0.48
MBD1-223	ENST00000590215		F8WDY8	70 aa		12.03	□□□□□ -0.48
MBD1-223	ENST00000590215	ATP6V1G1	O75348	118 aa		12.03	□□□□□ -0.48
MBD1-223	ENST00000590215	SPAG11B	Q08648	103 aa		12.03	□□□□□ -0.48
MBD1-223	ENST00000590215	SYCN	Q0VAF6	134 aa		12.03	□□□□□ -0.48
MBD1-223	ENST00000590215	ORAOV1	Q8WV07	137 aa		12.03	□□□□□ -0.48
MBD1-223	ENST00000590215	IGLV5-45	A0A087WSX0	123 aa		12.02	□□□□□ -0.49
MBD1-223	ENST00000590215	HSBP1	O75506	76 aa		12.02	□□□□□ -0.49
MBD1-223	ENST00000590215	CARD19	Q96LW7	228 aa		12.02	□□□□□ -0.49
MBD1-223	ENST00000590215	CHAC1	Q9BUX1	264 aa		12.02	□□□□□ -0.49
MBD1-223	ENST00000590215	KRTAP17-1	Q9BYP8	105 aa		12.02	□□□□□ -0.49
MBD1-223	ENST00000590215	GEMIN7	Q9H840	131 aa	Known RBP	12.02	□□□□□ -0.49
MBD1-223	ENST00000590215	SERF1A	O75920	110 aa		12.01	□□□□□ -0.49
MBD1-223	ENST00000590215	CIRBP	Q14011	172 aa	Known RBP	12.01	□□□□□ -0.49
MBD1-223	ENST00000590215	KIAA0087	Q14695	138 aa		12.01	□□□□□ -0.49
MBD1-223	ENST00000590215	CDKN2A-AS1	Q9UH64	79 aa		12.01	□□□□□ -0.49
MBD1-223	ENST00000590215	CAMK2N2	Q96S95	79 aa		12	□□□□□ -0.49
MBD1-223	ENST00000590215	FAT1	Q14517	4588 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215	IGLC3	P0DOY3	106 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215	HAMP	P81172	84 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215		Q6ZRU5	148 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215	SCX	Q7RTU7	201 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215		Q8N1X5	172 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215	FAM19A2	Q8N3H0	131 aa		11.99	□□□□□ -0.49
MBD1-223	ENST00000590215	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.99	□□□□□ -0.49
MBD1-223	ENST00000590215	PANO1	I0J062	215 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	NUPR1	O60356	82 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BK	O60814	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BJ	P06899	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BO	P23527	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BB	P33778	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BD	P58876	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BC	P62807	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST2H2BE	Q16778	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	RNF151	Q2KHN1	245 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BH	Q93079	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BN	Q99877	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	HIST1H2BM	Q99879	126 aa		11.98	□□□□□ -0.49
MBD1-223	ENST00000590215	LINC00469	Q8N7U9	141 aa		11.97	□□□□□ -0.49
MBD1-223	ENST00000590215	CIRBP-AS1	Q8TBR5	109 aa		11.97	□□□□□ -0.49
MBD1-223	ENST00000590215	IFI27L1	Q96BM0	104 aa		11.97	□□□□□ -0.49
MBD1-223	ENST00000590215	MRPL35	Q9NZE8	188 aa	Known RBP	11.97	□□□□□ -0.49
MBD1-223	ENST00000590215	PKIG	Q9Y2B9	76 aa		11.97	□□□□□ -0.49
MBD1-223	ENST00000590215	NDUFA6	P56556	154 aa		11.96	□□□□□ -0.49
MBD1-223	ENST00000590215	TRAV12-1	A0A0B4J245	112 aa		11.95	□□□□□ -0.5
MBD1-223	ENST00000590215	SMIM1	B2RUZ4	78 aa		11.95	□□□□□ -0.5
MBD1-223	ENST00000590215	NDUFA1	O15239	70 aa		11.95	□□□□□ -0.5
MBD1-223	ENST00000590215	SPACA4	Q8TDM5	124 aa		11.95	□□□□□ -0.5
MBD1-223	ENST00000590215		Q8IZM0	81 aa		11.94	□□□□□ -0.5
MBD1-223	ENST00000590215	PACRG	Q96M98	296 aa	Predicted RBP	11.94	□□□□□ -0.5
MBD1-223	ENST00000590215	LEPROTL1	O95214	131 aa		11.93	□□□□□ -0.5
MBD1-223	ENST00000590215	CHTF8	P0CG12	524 aa		11.93	□□□□□ -0.5
MBD1-223	ENST00000590215	C10orf25	Q5T742	122 aa		11.93	□□□□□ -0.5
MBD1-223	ENST00000590215	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.93	□□□□□ -0.5
MBD1-223	ENST00000590215		A0A096LNI7	61 aa		11.92	□□□□□ -0.5
MBD1-223	ENST00000590215	LOC107984640	A0A0U1RRK4	108 aa		11.92	□□□□□ -0.5
MBD1-223	ENST00000590215	SMR3B	P02814	79 aa	Predicted RBP	11.92	□□□□□ -0.5
MBD1-223	ENST00000590215	ZNF22	P17026	224 aa	Predicted RBP	11.92	□□□□□ -0.5
MBD1-223	ENST00000590215		H3BRM9	83 aa		11.91	□□□□□ -0.5

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