RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
RETREG3-208ENST00000589797 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
RETREG3-208ENST00000589797 KIF25-AS1Q9Y6Z4 181 aa10.54□□□□□ -0.72
RETREG3-208ENST00000589797 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
RETREG3-208ENST00000589797 TINCRA0A1B0GVN0 87 aa10.53□□□□□ -0.72
RETREG3-208ENST00000589797 BRI3O95415 125 aa10.53□□□□□ -0.72
RETREG3-208ENST00000589797 TCL1BO95988 128 aa10.52□□□□□ -0.72
RETREG3-208ENST00000589797 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.72
RETREG3-208ENST00000589797 LINC00315P59091 139 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 GAGE2EQ4V326 116 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 GAGE2DQ9UEU5 116 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 COX7A2LO14548 114 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 PSCAO43653 123 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 TRBV6-8A0A0A6YYG3 113 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 INSL3P51460 131 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 APCP25054 2843 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
RETREG3-208ENST00000589797 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
RETREG3-208ENST00000589797 RETNQ9HD89 108 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 RBX1P62877 108 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 COX6A2Q02221 97 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 BAALC-AS2P0C853 105 aa10.47□□□□□ -0.73
RETREG3-208ENST00000589797 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
RETREG3-208ENST00000589797 IGLV4-60A0A075B6I1 120 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.74
RETREG3-208ENST00000589797 NSD1Q96L73 2696 aaPredicted RBP10.46□□□□□ -0.74
RETREG3-208ENST00000589797 A0A096LNT2 108 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 MIAQ16674 131 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 C1orf43Q9BWL3 253 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 NCR3O14931 201 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 IFITM1P13164 125 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 HERV-K104P63124 156 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 REG3AQ06141 175 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 CAMK2N2Q96S95 79 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 PYGO1Q9Y3Y4 419 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 NIPBLQ6KC79 2804 aaeCLIP10.44□□□□□ -0.74
RETREG3-208ENST00000589797 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
RETREG3-208ENST00000589797 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
RETREG3-208ENST00000589797 UBE2D3P61077 147 aa10.44□□□□□ -0.74
RETREG3-208ENST00000589797 UBE2D2P62837 147 aa10.44□□□□□ -0.74
RETREG3-208ENST00000589797 UBE2D1P51668 147 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
RETREG3-208ENST00000589797 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 TRIAP1O43715 76 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 LECT2O14960 151 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 ADAMTSL4-AS1Q5T5F5 129 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 LINC00308Q8TCZ7 52 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 CDC42SE2Q9NRR3 84 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 FOXI1Q12951 378 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 BAHCC1Q9P281 2608 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 MRPS36P82909 103 aaKnown RBP10.42□□□□□ -0.74
RETREG3-208ENST00000589797 C15orf53Q8NAA6 179 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 Q8N2B8 174 aa10.41□□□□□ -0.74
RETREG3-208ENST00000589797 FSHBP01225 129 aa10.41□□□□□ -0.74
RETREG3-208ENST00000589797 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
RETREG3-208ENST00000589797 SLPIP03973 132 aa10.4□□□□□ -0.74
RETREG3-208ENST00000589797 C11orf45Q8TAV5 145 aa10.4□□□□□ -0.74
RETREG3-208ENST00000589797 G3V4G9 280 aa10.39□□□□□ -0.75
RETREG3-208ENST00000589797 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
RETREG3-208ENST00000589797 TIRAPP58753 221 aa10.39□□□□□ -0.75
RETREG3-208ENST00000589797 DEFB131BA0A096LNP1 70 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
RETREG3-208ENST00000589797 FHL2Q14192 279 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 LYRM9A8MSI8 78 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
RETREG3-208ENST00000589797 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
RETREG3-208ENST00000589797 NTM-AS1Q6ZSK4 140 aa10.37□□□□□ -0.75
RETREG3-208ENST00000589797 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
RETREG3-208ENST00000589797 SPANXB1Q9NS25 103 aaPredicted RBP10.37□□□□□ -0.75
RETREG3-208ENST00000589797 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
RETREG3-208ENST00000589797 NDUFA1O15239 70 aa10.36□□□□□ -0.75
RETREG3-208ENST00000589797 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
RETREG3-208ENST00000589797 KLK9Q2XQG4 91 aa10.36□□□□□ -0.75
RETREG3-208ENST00000589797 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
RETREG3-208ENST00000589797 C16orf95Q9H693 158 aa10.35□□□□□ -0.75
RETREG3-208ENST00000589797 SMIM1B2RUZ4 78 aa10.35□□□□□ -0.75
RETREG3-208ENST00000589797 CCL18P55774 89 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 1191 ms