RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 KRTAP10-8P60410 259 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 GAGE6Q13070 117 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 LINC01556Q5JQF7 62 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 NIT1Q86X76 327 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 C20orf203Q8NBC4 194 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 RMI2Q96E14 147 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 SCGB3A1Q96QR1 104 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 HSPB8Q9UJY1 196 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 LEPROTL1O95214 131 aa3.9□□□□□ -1.79
VPS25-204ENST00000589577 NPSP0C0P6 89 aa3.9□□□□□ -1.79
VPS25-204ENST00000589577 FGF6P10767 208 aa3.9□□□□□ -1.79
VPS25-204ENST00000589577 TMEM141Q96I45 108 aa3.9□□□□□ -1.79
VPS25-204ENST00000589577 TIMM21Q9BVV7 248 aa3.9□□□□□ -1.79
VPS25-204ENST00000589577 Q9UF83 564 aa3.9□□□□□ -1.79
VPS25-204ENST00000589577 TRAV8-3A0A0A6YYJ7 113 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 A0A0J9YXV3 536 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 A0A1B0GUV1 79 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 C20orf202A1L168 122 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 PANO1I0J062 215 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 ESDP10768 282 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 SEC11AP67812 179 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 SS18Q15532 418 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 TEX43Q6ZNM6 134 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 NTM-AS1Q6ZSK4 140 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 ERASQ7Z444 233 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 MRPL52Q86TS9 123 aaKnown RBP3.89□□□□□ -1.79
VPS25-204ENST00000589577 Q8N3U1 123 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 BAALCQ8WXS3 180 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 TOMM6Q96B49 74 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 PACRGQ96M98 296 aaPredicted RBP3.89□□□□□ -1.79
VPS25-204ENST00000589577 TIMM17AQ99595 171 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 VCX2Q9H322 139 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 TMA7Q9Y2S6 64 aaKnown RBP3.89□□□□□ -1.79
VPS25-204ENST00000589577 PYGO1Q9Y3Y4 419 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 CSDC2Q9Y534 153 aaKnown RBP3.89□□□□□ -1.79
VPS25-204ENST00000589577 COX11Q9Y6N1 276 aa3.89□□□□□ -1.79
VPS25-204ENST00000589577 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 LINC01546A6NGU7 62 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 IFITM10A6NMD0 228 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 CCL25O15444 150 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 PRSS1P07477 247 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 AKR1D1P51857 326 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 RBX1P62877 108 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 RPL39P62891 51 aaKnown RBP3.88□□□□□ -1.79
VPS25-204ENST00000589577 MRPS36P82909 103 aaKnown RBP3.88□□□□□ -1.79
VPS25-204ENST00000589577 MIAQ16674 131 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 MPV17L2Q567V2 206 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
VPS25-204ENST00000589577 FAM19A2Q8N3H0 131 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 UBE2WQ96B02 151 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 C1orf43Q9BWL3 253 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 MAP1LC3CQ9BXW4 147 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 UBE2D4Q9Y2X8 147 aa3.88□□□□□ -1.79
VPS25-204ENST00000589577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.88□□□□□ -1.79
VPS25-204ENST00000589577 TRAV8-4A0A0B4J246 113 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 H0Y8G0 127 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 FABP4P15090 132 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 LORP23490 312 aaPredicted RBP3.87□□□□□ -1.79
VPS25-204ENST00000589577 REG3AQ06141 175 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 PMCHL1Q16048 86 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 C4orf48Q5BLP8 95 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 PDZD11Q5EBL8 140 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 ZNF664Q8N3J9 261 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 Q8N976 141 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 IFI27L1Q96BM0 104 aa3.87□□□□□ -1.79
VPS25-204ENST00000589577 GEMIN7Q9H840 131 aaKnown RBP3.87□□□□□ -1.79
VPS25-204ENST00000589577 IGKV2D-24A0A075B6R9 120 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 PMVKQ15126 192 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 CLPSL2Q6UWE3 100 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 Q6ZUT4 128 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 LINC00269Q8N2A0 174 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 CDC42SE2Q9NRR3 84 aa3.86□□□□□ -1.79
VPS25-204ENST00000589577 IGLV4-60A0A075B6I1 120 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 IGLV4-3A0A075B6K6 122 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 H3BRM9 83 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 APOMO95445 188 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 MALP21145 153 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 KRTDAPP60985 99 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
VPS25-204ENST00000589577 HERVK_113P63121 156 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 CFAP161Q6P656 301 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 URB1-AS1Q96HZ7 61 aa3.85□□□□□ -1.79
VPS25-204ENST00000589577 TRAV12-1A0A0B4J245 112 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 IGIPA6NJ69 53 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 PLNP26678 52 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 XCL1P47992 114 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 HERVK_113P61574 105 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 C14orf177Q52M58 125 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
VPS25-204ENST00000589577 PET117Q6UWS5 81 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 HIST3H2BBQ8N257 126 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 LINC00469Q8N7U9 141 aa3.84□□□□□ -1.79
VPS25-204ENST00000589577 CHCHD10Q8WYQ3 142 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms