RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
DNMT1-221ENST00000589538 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
DNMT1-221ENST00000589538 C5orf38Q86SI9 138 aa10.54□□□□□ -0.72
DNMT1-221ENST00000589538 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
DNMT1-221ENST00000589538 VCX2Q9H322 139 aa10.54□□□□□ -0.72
DNMT1-221ENST00000589538 DNAH8Q96JB1 4490 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 IGHV3OR16-9A0A0B4J2B5 98 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 SYCNQ0VAF6 134 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
DNMT1-221ENST00000589538 OR10D4PQ8NGN7 298 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 TOMM6Q96B49 74 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 CARD19Q96LW7 228 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
DNMT1-221ENST00000589538 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
DNMT1-221ENST00000589538 IGIPA6NJ69 53 aa10.52□□□□□ -0.73
DNMT1-221ENST00000589538 FA2HQ7L5A8 372 aa10.52□□□□□ -0.73
DNMT1-221ENST00000589538 AMELXQ99217 191 aa10.52□□□□□ -0.73
DNMT1-221ENST00000589538 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.73
DNMT1-221ENST00000589538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-221ENST00000589538 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
DNMT1-221ENST00000589538 F8WDY8 70 aa10.51□□□□□ -0.73
DNMT1-221ENST00000589538 COX6A2Q02221 97 aa10.51□□□□□ -0.73
DNMT1-221ENST00000589538 DPH3Q96FX2 82 aa10.51□□□□□ -0.73
DNMT1-221ENST00000589538 C2orf48Q96LS8 159 aa10.51□□□□□ -0.73
DNMT1-221ENST00000589538 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
DNMT1-221ENST00000589538 UBE2D1P51668 147 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 SEC11AP67812 179 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 SPAG11BQ08648 103 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 LINC00242Q5T6M2 205 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 ERASQ7Z444 233 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 LINC00526Q96FQ7 95 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
DNMT1-221ENST00000589538 A0A087WZ39 114 aa10.49□□□□□ -0.73
DNMT1-221ENST00000589538 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
DNMT1-221ENST00000589538 LINC01561Q8N1V8 128 aa10.49□□□□□ -0.73
DNMT1-221ENST00000589538 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
DNMT1-221ENST00000589538 CAMK2N2Q96S95 79 aa10.49□□□□□ -0.73
DNMT1-221ENST00000589538 LINC00173Q6ZV60 143 aa10.48□□□□□ -0.73
DNMT1-221ENST00000589538 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
DNMT1-221ENST00000589538 PCLOQ9Y6V0 5065 aa10.48□□□□□ -0.73
DNMT1-221ENST00000589538 PANO1I0J062 215 aa10.47□□□□□ -0.73
DNMT1-221ENST00000589538 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
DNMT1-221ENST00000589538 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
DNMT1-221ENST00000589538 RAB5BP61020 215 aa10.46□□□□□ -0.73
DNMT1-221ENST00000589538 RNF151Q2KHN1 245 aa10.46□□□□□ -0.73
DNMT1-221ENST00000589538 Q6ZRU5 148 aa10.46□□□□□ -0.73
DNMT1-221ENST00000589538 YPEL4Q96NS1 127 aa10.46□□□□□ -0.73
DNMT1-221ENST00000589538 SRRM2Q9UQ35 2752 aaKnown RBP10.45□□□□□ -0.74
DNMT1-221ENST00000589538 A0A087WYN8 130 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 LINC00614P0C842 121 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 HERVK_113P63121 156 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 MAJINQ3KP22 176 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 C18orf32Q8TCD1 76 aa10.45□□□□□ -0.74
DNMT1-221ENST00000589538 NDUFA1O15239 70 aa10.44□□□□□ -0.74
DNMT1-221ENST00000589538 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
DNMT1-221ENST00000589538 SLC7A5P1Q8MH63 180 aa10.44□□□□□ -0.74
DNMT1-221ENST00000589538 GEMIN7Q9H840 131 aaKnown RBP10.44□□□□□ -0.74
DNMT1-221ENST00000589538 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
DNMT1-221ENST00000589538 FAT1Q14517 4588 aa10.44□□□□□ -0.74
DNMT1-221ENST00000589538 A0A096LNI7 61 aa10.43□□□□□ -0.74
DNMT1-221ENST00000589538 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
DNMT1-221ENST00000589538 VPS13BQ7Z7G8 4022 aa10.42□□□□□ -0.74
DNMT1-221ENST00000589538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.42□□□□□ -0.74
DNMT1-221ENST00000589538 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
DNMT1-221ENST00000589538 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
DNMT1-221ENST00000589538 PRSS2P07478 247 aa10.41□□□□□ -0.74
DNMT1-221ENST00000589538 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
DNMT1-221ENST00000589538 CBLN2Q8IUK8 224 aa10.41□□□□□ -0.74
DNMT1-221ENST00000589538 STPG4Q8N801 248 aa10.41□□□□□ -0.74
DNMT1-221ENST00000589538 C7orf33Q8WU49 177 aa10.41□□□□□ -0.74
DNMT1-221ENST00000589538 TINCRA0A1B0GVN0 87 aa10.4□□□□□ -0.74
DNMT1-221ENST00000589538 HBDP02042 147 aa10.4□□□□□ -0.74
DNMT1-221ENST00000589538 PMVKQ15126 192 aa10.4□□□□□ -0.74
DNMT1-221ENST00000589538 PACRGQ96M98 296 aaPredicted RBP10.4□□□□□ -0.74
DNMT1-221ENST00000589538 CST9LQ9H4G1 147 aa10.4□□□□□ -0.74
DNMT1-221ENST00000589538 KIAA0087Q14695 138 aa10.39□□□□□ -0.75
DNMT1-221ENST00000589538 A0A0J9YXV3 536 aa10.38□□□□□ -0.75
DNMT1-221ENST00000589538 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
DNMT1-221ENST00000589538 GAGE2BQ13066 116 aa10.38□□□□□ -0.75
DNMT1-221ENST00000589538 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
DNMT1-221ENST00000589538 CDKN2A-AS1Q9UH64 79 aa10.38□□□□□ -0.75
DNMT1-221ENST00000589538 TRBV30A0A0K0K1B3 111 aa10.37□□□□□ -0.75
DNMT1-221ENST00000589538 ATP5LO75964 103 aa10.37□□□□□ -0.75
DNMT1-221ENST00000589538 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
DNMT1-221ENST00000589538 KRTAP10-4P60372 401 aaPredicted RBP10.37□□□□□ -0.75
DNMT1-221ENST00000589538 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
DNMT1-221ENST00000589538 Q8IZM0 81 aa10.37□□□□□ -0.75
DNMT1-221ENST00000589538 LINC00469Q8N7U9 141 aa10.37□□□□□ -0.75
DNMT1-221ENST00000589538 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
DNMT1-221ENST00000589538 A0A096LNJ9 63 aa10.36□□□□□ -0.75
DNMT1-221ENST00000589538 CKS1BP61024 79 aa10.36□□□□□ -0.75
DNMT1-221ENST00000589538 C6orf226Q5I0X4 101 aa10.36□□□□□ -0.75
DNMT1-221ENST00000589538 IGLV5-45A0A087WSX0 123 aa10.35□□□□□ -0.75
DNMT1-221ENST00000589538 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
DNMT1-221ENST00000589538 TOMM7Q9P0U1 55 aa10.35□□□□□ -0.75
DNMT1-221ENST00000589538 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
DNMT1-221ENST00000589538 PDZD11Q5EBL8 140 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms