RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 ENHOQ6UWT2 76 aa14.24□□□□□ -0.13
R3HDM4-204ENST00000589428 TRAV8-3A0A0A6YYJ7 113 aa14.24□□□□□ -0.13
R3HDM4-204ENST00000589428 LINC00959A0A1B0GUT2 108 aa14.24□□□□□ -0.13
R3HDM4-204ENST00000589428 C12orf57Q99622 126 aa14.24□□□□□ -0.13
R3HDM4-204ENST00000589428 IGLC3P0DOY3 106 aa14.23□□□□□ -0.13
R3HDM4-204ENST00000589428 Q6ZRN7 208 aaPredicted RBP14.23□□□□□ -0.13
R3HDM4-204ENST00000589428 UBE2WQ96B02 151 aa14.23□□□□□ -0.13
R3HDM4-204ENST00000589428 CRPP02741 224 aa14.22□□□□□ -0.13
R3HDM4-204ENST00000589428 LINC00242Q5T6M2 205 aa14.22□□□□□ -0.13
R3HDM4-204ENST00000589428 C11orf86A6NJI1 115 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 DPM2O94777 84 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 PLNP26678 52 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 TNP2Q05952 138 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 FAM19A3Q7Z5A8 133 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 ATOH7Q8N100 152 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 CHAC1Q9BUX1 264 aa14.21□□□□□ -0.13
R3HDM4-204ENST00000589428 TINCRA0A1B0GVN0 87 aa14.2□□□□□ -0.14
R3HDM4-204ENST00000589428 PSCAO43653 123 aa14.2□□□□□ -0.14
R3HDM4-204ENST00000589428 IGKCP01834 107 aa14.2□□□□□ -0.14
R3HDM4-204ENST00000589428 IGLV10-54A0A075B6I4 117 aa14.19□□□□□ -0.14
R3HDM4-204ENST00000589428 RMI2Q96E14 147 aa14.19□□□□□ -0.14
R3HDM4-204ENST00000589428 TM2D2Q9BX73 214 aa14.19□□□□□ -0.14
R3HDM4-204ENST00000589428 COX6A2Q02221 97 aa14.18□□□□□ -0.14
R3HDM4-204ENST00000589428 SS18Q15532 418 aa14.18□□□□□ -0.14
R3HDM4-204ENST00000589428 MIAQ16674 131 aa14.18□□□□□ -0.14
R3HDM4-204ENST00000589428 CCL25O15444 150 aa14.18□□□□□ -0.14
R3HDM4-204ENST00000589428 CDPF1Q6NVV7 123 aa14.18□□□□□ -0.14
R3HDM4-204ENST00000589428 XCL1P47992 114 aa14.17□□□□□ -0.14
R3HDM4-204ENST00000589428 CHCHD10Q8WYQ3 142 aaPredicted RBP14.17□□□□□ -0.14
R3HDM4-204ENST00000589428 GEMIN7Q9H840 131 aaKnown RBP14.17□□□□□ -0.14
R3HDM4-204ENST00000589428 ZNF22P17026 224 aaPredicted RBP14.16□□□□□ -0.14
R3HDM4-204ENST00000589428 HERVK_113P63121 156 aa14.16□□□□□ -0.14
R3HDM4-204ENST00000589428 SEC11AP67812 179 aa14.16□□□□□ -0.14
R3HDM4-204ENST00000589428 HECTD4Q9Y4D8 3996 aa14.16□□□□□ -0.14
R3HDM4-204ENST00000589428 IGKV2D-24A0A075B6R9 120 aa14.15□□□□□ -0.14
R3HDM4-204ENST00000589428 IGLV5-45A0A087WSX0 123 aa14.15□□□□□ -0.14
R3HDM4-204ENST00000589428 COX11Q9Y6N1 276 aa14.15□□□□□ -0.14
R3HDM4-204ENST00000589428 TRAV8-4A0A0B4J246 113 aa14.15□□□□□ -0.14
R3HDM4-204ENST00000589428 LINC00469Q8N7U9 141 aa14.15□□□□□ -0.14
R3HDM4-204ENST00000589428 CDKN2A-AS1Q9UH64 79 aa14.15□□□□□ -0.14
R3HDM4-204ENST00000589428 A0A1B0GVY2 172 aa14.14□□□□□ -0.15
R3HDM4-204ENST00000589428 IGHV3OR16-9A0A0B4J2B5 98 aa14.13□□□□□ -0.15
R3HDM4-204ENST00000589428 MAJINQ3KP22 176 aa14.13□□□□□ -0.15
R3HDM4-204ENST00000589428 TMEM170BQ5T4T1 132 aa14.13□□□□□ -0.15
R3HDM4-204ENST00000589428 C1orf43Q9BWL3 253 aa14.13□□□□□ -0.15
R3HDM4-204ENST00000589428 EPPK1P58107 5090 aaKnown RBP14.13□□□□□ -0.15
R3HDM4-204ENST00000589428 EREGO14944 169 aa14.12□□□□□ -0.15
R3HDM4-204ENST00000589428 CD164L2Q6UWJ8 174 aa14.12□□□□□ -0.15
R3HDM4-204ENST00000589428 hDV102S1A0JD36 115 aa14.12□□□□□ -0.15
R3HDM4-204ENST00000589428 KRTAP26-1Q6PEX3 210 aa14.12□□□□□ -0.15
R3HDM4-204ENST00000589428 STPG4Q8N801 248 aa14.12□□□□□ -0.15
R3HDM4-204ENST00000589428 FOXI1Q12951 378 aa14.11□□□□□ -0.15
R3HDM4-204ENST00000589428 GAGE12HA6NDE8 117 aa14.1□□□□□ -0.15
R3HDM4-204ENST00000589428 PKD1P98161 4303 aa14.1□□□□□ -0.15
R3HDM4-204ENST00000589428 A0A087WTM6 91 aa14.1□□□□□ -0.15
R3HDM4-204ENST00000589428 C5orf38Q86SI9 138 aa14.09□□□□□ -0.15
R3HDM4-204ENST00000589428 A0A087WZ39 114 aa14.08□□□□□ -0.16
R3HDM4-204ENST00000589428 TMEM223A0PJW6 202 aa14.08□□□□□ -0.16
R3HDM4-204ENST00000589428 DNAH11Q96DT5 4516 aa14.08□□□□□ -0.16
R3HDM4-204ENST00000589428 H3BRM9 83 aa14.07□□□□□ -0.16
R3HDM4-204ENST00000589428 SPINK8P0C7L1 97 aa14.07□□□□□ -0.16
R3HDM4-204ENST00000589428 ANKRD39Q53RE8 183 aa14.07□□□□□ -0.16
R3HDM4-204ENST00000589428 VAMP8Q9BV40 100 aa14.07□□□□□ -0.16
R3HDM4-204ENST00000589428 SMIM1B2RUZ4 78 aa14.06□□□□□ -0.16
R3HDM4-204ENST00000589428 COX7A2LO14548 114 aa14.06□□□□□ -0.16
R3HDM4-204ENST00000589428 PAM16Q9Y3D7 125 aa14.05□□□□□ -0.16
R3HDM4-204ENST00000589428 IGHV3-64A0A075B6Q5 118 aa14.04□□□□□ -0.16
R3HDM4-204ENST00000589428 LRCOL1A6NCL2 159 aa14.04□□□□□ -0.16
R3HDM4-204ENST00000589428 HSBP1L1C9JCN9 74 aa14.04□□□□□ -0.16
R3HDM4-204ENST00000589428 HERVK_113P61574 105 aa14.04□□□□□ -0.16
R3HDM4-204ENST00000589428 MAPKAPK5-AS1Q8N8E1 139 aa14.04□□□□□ -0.16
R3HDM4-204ENST00000589428 IGKV2D-26A0A0A0MRZ7 120 aa14.03□□□□□ -0.16
R3HDM4-204ENST00000589428 IGLV5-39A0A0G2JS06 123 aa14.03□□□□□ -0.16
R3HDM4-204ENST00000589428 E9PLD3 99 aa14.02□□□□□ -0.16
R3HDM4-204ENST00000589428 PKHD1P08F94 4074 aa14.02□□□□□ -0.17
R3HDM4-204ENST00000589428 LECT2O14960 151 aa14.01□□□□□ -0.17
R3HDM4-204ENST00000589428 SPATA45Q537H7 98 aa14.01□□□□□ -0.17
R3HDM4-204ENST00000589428 LINC01561Q8N1V8 128 aa14.01□□□□□ -0.17
R3HDM4-204ENST00000589428 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
R3HDM4-204ENST00000589428 MALP21145 153 aa14.01□□□□□ -0.17
R3HDM4-204ENST00000589428 S100A12P80511 92 aa14.01□□□□□ -0.17
R3HDM4-204ENST00000589428 KRTAP10-2P60368 255 aa14□□□□□ -0.17
R3HDM4-204ENST00000589428 Q8N814 137 aa14□□□□□ -0.17
R3HDM4-204ENST00000589428 TSPEAR-AS2P59090 65 aa13.99□□□□□ -0.17
R3HDM4-204ENST00000589428 WFDC2Q14508 124 aa13.99□□□□□ -0.17
R3HDM4-204ENST00000589428 PCP4L1A6NKN8 68 aa13.98□□□□□ -0.17
R3HDM4-204ENST00000589428 C16orf90A8MZG2 172 aa13.98□□□□□ -0.17
R3HDM4-204ENST00000589428 LEPROTO15243 131 aa13.98□□□□□ -0.17
R3HDM4-204ENST00000589428 NMUP48645 174 aa13.98□□□□□ -0.17
R3HDM4-204ENST00000589428 ORAOV1Q8WV07 137 aa13.97□□□□□ -0.17
R3HDM4-204ENST00000589428 PGPEP1Q9NXJ5 209 aa13.97□□□□□ -0.17
R3HDM4-204ENST00000589428 C15orf56Q8N910 161 aa13.96□□□□□ -0.17
R3HDM4-204ENST00000589428 DYNC1H1Q14204 4646 aaKnown RBP13.96□□□□□ -0.18
R3HDM4-204ENST00000589428 J3QQQ9 107 aa13.95□□□□□ -0.18
R3HDM4-204ENST00000589428 C14orf177Q52M58 125 aa13.95□□□□□ -0.18
R3HDM4-204ENST00000589428 NTN5Q8WTR8 489 aaPredicted RBP13.95□□□□□ -0.18
R3HDM4-204ENST00000589428 PLEKHB2Q96CS7 222 aa13.95□□□□□ -0.18
R3HDM4-204ENST00000589428 TTTY13Q9BZ97 58 aa13.95□□□□□ -0.18
R3HDM4-204ENST00000589428 APOMO95445 188 aa13.95□□□□□ -0.18
R3HDM4-204ENST00000589428 TOMM7Q9P0U1 55 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms