RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	OXLD1	Q5BKU9	147 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	EDA2R	Q9HAV5	297 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	VCY	O14598	125 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	TSHB	P01222	138 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	POLR2K	P53803	58 aa	Known RBP	11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	TSPEAR-AS2	P59090	65 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	C16orf74	Q96GX8	76 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	TP53TG1	Q9Y2A0	90 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318	IGHV3-73	A0A0B4J1V6	119 aa		11	□□□□□ -0.65
DDX39A-209	ENST00000589318	RS1	O15537	224 aa		11	□□□□□ -0.65
DDX39A-209	ENST00000589318	DAZ2	Q13117	558 aa	Known RBP	11	□□□□□ -0.65
DDX39A-209	ENST00000589318	UQCRQ	O14949	82 aa		10.99	□□□□□ -0.65
DDX39A-209	ENST00000589318		Q6ZSN1	163 aa		10.99	□□□□□ -0.65
DDX39A-209	ENST00000589318		Q6ZTI0	123 aa		10.99	□□□□□ -0.65
DDX39A-209	ENST00000589318	MUSTN1	Q8IVN3	82 aa		10.99	□□□□□ -0.65
DDX39A-209	ENST00000589318	C3orf22	Q8N5N4	141 aa		10.99	□□□□□ -0.65
DDX39A-209	ENST00000589318	ANK2	Q01484	3957 aa		10.99	□□□□□ -0.65
DDX39A-209	ENST00000589318	TRGV1	A0A0A0MS02	117 aa		10.98	□□□□□ -0.65
DDX39A-209	ENST00000589318	TMEM223	A0PJW6	202 aa		10.98	□□□□□ -0.65
DDX39A-209	ENST00000589318	PPDPF	Q9H3Y8	114 aa		10.98	□□□□□ -0.65
DDX39A-209	ENST00000589318	NOP10	Q9NPE3	64 aa	Known RBP	10.98	□□□□□ -0.65
DDX39A-209	ENST00000589318		H7C423	109 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	TRIAP1	O43715	76 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	KRTAP10-11	P60412	298 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	KIR2DL5B	Q8NHK3	375 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	OVOL2	Q9BRP0	275 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	CHCHD5	Q9BSY4	110 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	CSDC2	Q9Y534	153 aa	Known RBP	10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318		X6R8D5	127 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	NBEAL2	Q6ZNJ1	2754 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	DNAH3	Q8TD57	4116 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	TRBV27	A0A0K0K1C4	114 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318		J3KT08	172 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	EIF4EBP3	O60516	100 aa	Predicted RBP	10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	RPS28	P62857	69 aa	Known RBP	10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	EGFEM1P	Q0D2K5	195 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318		Q9UF83	564 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	ICOS	Q9Y6W8	199 aa		10.97	□□□□□ -0.65
DDX39A-209	ENST00000589318	ZNRF2	Q8NHG8	242 aa		10.96	□□□□□ -0.65
DDX39A-209	ENST00000589318	LINC00526	Q96FQ7	95 aa		10.96	□□□□□ -0.65
DDX39A-209	ENST00000589318	IGHV3-53	P01767	116 aa		10.96	□□□□□ -0.66
DDX39A-209	ENST00000589318	IGHV4-30-4	P0DP06	118 aa		10.96	□□□□□ -0.66
DDX39A-209	ENST00000589318	RHOH	Q15669	191 aa		10.96	□□□□□ -0.66
DDX39A-209	ENST00000589318	C9orf153	Q5TBE3	101 aa		10.96	□□□□□ -0.66
DDX39A-209	ENST00000589318		H7C2G1	150 aa		10.95	□□□□□ -0.66
DDX39A-209	ENST00000589318	LST1	O00453	97 aa		10.95	□□□□□ -0.66
DDX39A-209	ENST00000589318	CXCL5	P42830	114 aa		10.95	□□□□□ -0.66
DDX39A-209	ENST00000589318	APOC4	P55056	127 aa		10.94	□□□□□ -0.66
DDX39A-209	ENST00000589318	LINC00643	Q86TS7	51 aa		10.94	□□□□□ -0.66
DDX39A-209	ENST00000589318	DEFB104A	Q8WTQ1	72 aa		10.94	□□□□□ -0.66
DDX39A-209	ENST00000589318	FAM236A	A0A1B0GUQ0	79 aa		10.93	□□□□□ -0.66
DDX39A-209	ENST00000589318	FAM236B	A0A1B0GV22	79 aa		10.93	□□□□□ -0.66
DDX39A-209	ENST00000589318	EMP1	P54849	157 aa		10.93	□□□□□ -0.66
DDX39A-209	ENST00000589318	DEFB135	Q30KP9	77 aa		10.93	□□□□□ -0.66
DDX39A-209	ENST00000589318		A0A0J9YXY3	114 aa		10.92	□□□□□ -0.66
DDX39A-209	ENST00000589318	SMIM9	A6NGZ8	99 aa		10.92	□□□□□ -0.66
DDX39A-209	ENST00000589318	LINC00694	P0DN24	101 aa		10.92	□□□□□ -0.66
DDX39A-209	ENST00000589318	OR13C6P	Q8NH95	151 aa		10.91	□□□□□ -0.66
DDX39A-209	ENST00000589318	LINC00612	Q8N6U2	182 aa		10.9	□□□□□ -0.66
DDX39A-209	ENST00000589318		I3L3M4	83 aa		10.9	□□□□□ -0.67
DDX39A-209	ENST00000589318	ZNF22	P17026	224 aa	Predicted RBP	10.9	□□□□□ -0.67
DDX39A-209	ENST00000589318	HERVK_113	P63121	156 aa		10.89	□□□□□ -0.67
DDX39A-209	ENST00000589318	TRGV2	A0A075B6R0	118 aa		10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318	SDIM1	Q6ZPB5	146 aa		10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318		A8MZ25	164 aa		10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318	TIMM17B	O60830	172 aa		10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318	CRYGA	P11844	174 aa		10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318	COX7C	P15954	63 aa		10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318	RPL39	P62891	51 aa	Known RBP	10.88	□□□□□ -0.67
DDX39A-209	ENST00000589318		K7EQD1	137 aa		10.87	□□□□□ -0.67
DDX39A-209	ENST00000589318	MIA	Q16674	131 aa		10.87	□□□□□ -0.67
DDX39A-209	ENST00000589318	LITAF	Q99732	161 aa		10.87	□□□□□ -0.67
DDX39A-209	ENST00000589318		Q8NAQ8	132 aa		10.86	□□□□□ -0.67
DDX39A-209	ENST00000589318	IGHV4-28	A0A0C4DH34	117 aa		10.86	□□□□□ -0.67
DDX39A-209	ENST00000589318	TRBV10-1	A0A0K0K1A3	114 aa		10.86	□□□□□ -0.67
DDX39A-209	ENST00000589318	C5orf38	Q86SI9	138 aa		10.86	□□□□□ -0.67
DDX39A-209	ENST00000589318	MDFI	Q99750	246 aa		10.86	□□□□□ -0.67
DDX39A-209	ENST00000589318	ATOX1	O00244	68 aa		10.85	□□□□□ -0.67
DDX39A-209	ENST00000589318	FHL2	Q14192	279 aa		10.85	□□□□□ -0.67
DDX39A-209	ENST00000589318	TIMM21	Q9BVV7	248 aa		10.85	□□□□□ -0.67
DDX39A-209	ENST00000589318	DEFB130B	P0DP73	79 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	DEFB130A	P0DP74	79 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	C20orf203	Q8NBC4	194 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	NOTCH1	P46531	2555 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	DEFB4A	O15263	64 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	IGHV3-30-3	P0DP02	117 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	MIF	P14174	115 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	FAM222A	Q5U5X8	452 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	GAGE2A	Q6NT46	116 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	DAND5	Q8N907	189 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	COPS9	Q8WXC6	57 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	PYGO1	Q9Y3Y4	419 aa		10.84	□□□□□ -0.67
DDX39A-209	ENST00000589318	IGHV3-38	A0A0C4DH36	116 aa		10.83	□□□□□ -0.68
DDX39A-209	ENST00000589318	TRBV6-4	A0A1B0GX49	114 aa		10.83	□□□□□ -0.68
DDX39A-209	ENST00000589318	LYRM9	A8MSI8	78 aa		10.83	□□□□□ -0.68
DDX39A-209	ENST00000589318	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.83	□□□□□ -0.68
DDX39A-209	ENST00000589318	IGHV1-58	A0A0C4DH39	117 aa		10.82	□□□□□ -0.68
DDX39A-209	ENST00000589318	PRSS2	P07478	247 aa		10.82	□□□□□ -0.68
DDX39A-209	ENST00000589318	CHCHD7	Q9BUK0	85 aa		10.82	□□□□□ -0.68
DDX39A-209	ENST00000589318	NBEAL1	Q6ZS30	2694 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms