RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 ZNF664Q8N3J9 261 aa4.99□□□□□ -1.61
RETREG3-207ENST00000589007 C20orf203Q8NBC4 194 aa4.99□□□□□ -1.61
RETREG3-207ENST00000589007 C18orf32Q8TCD1 76 aa4.99□□□□□ -1.61
RETREG3-207ENST00000589007 CHCHD1Q96BP2 118 aaKnown RBP4.99□□□□□ -1.61
RETREG3-207ENST00000589007 ALKBH7Q9BT30 221 aaPredicted RBP4.99□□□□□ -1.61
RETREG3-207ENST00000589007 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
RETREG3-207ENST00000589007 SMKR1H3BMG3 65 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 NUPR1O60356 82 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 HSBP1O75506 76 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 AMTP48728 403 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 CAMPP49913 170 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 TEX43Q6ZNM6 134 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 AMN1Q8IY45 258 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 RPL39LQ96EH5 51 aaKnown RBP4.98□□□□□ -1.61
RETREG3-207ENST00000589007 AP1S3Q96PC3 154 aa4.98□□□□□ -1.61
RETREG3-207ENST00000589007 TRBV10-1A0A0K0K1A3 114 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 M0QY20 66 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 RHODO00212 210 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 NCR2O95944 276 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
RETREG3-207ENST00000589007 TRBV7-3A0A075B6L6 115 aa4.96□□□□□ -1.62
RETREG3-207ENST00000589007 C20orf202A1L168 122 aa4.96□□□□□ -1.62
RETREG3-207ENST00000589007 SMIM17P0DL12 118 aa4.96□□□□□ -1.62
RETREG3-207ENST00000589007 PMCHL1Q16048 86 aa4.96□□□□□ -1.62
RETREG3-207ENST00000589007 VAMP8Q9BV40 100 aa4.96□□□□□ -1.62
RETREG3-207ENST00000589007 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
RETREG3-207ENST00000589007 IGLV4-60A0A075B6I1 120 aa4.95□□□□□ -1.62
RETREG3-207ENST00000589007 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
RETREG3-207ENST00000589007 REG3AQ06141 175 aa4.95□□□□□ -1.62
RETREG3-207ENST00000589007 C14orf144Q96I85 54 aa4.95□□□□□ -1.62
RETREG3-207ENST00000589007 TMEM191AQ9H0A3 160 aa4.95□□□□□ -1.62
RETREG3-207ENST00000589007 PRO1933Q9H354 126 aa4.95□□□□□ -1.62
RETREG3-207ENST00000589007 GVQW2A0A096LPI5 108 aaPredicted RBP4.94□□□□□ -1.62
RETREG3-207ENST00000589007 A0A1W2PNN7 141 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 TMEM262E9PQX1 116 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 PPBPP02775 128 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 LINC00614P0C842 121 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 C3orf79P0CE67 100 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 KRTDAPP60985 99 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 MRPL51Q4U2R6 128 aaKnown RBP4.94□□□□□ -1.62
RETREG3-207ENST00000589007 RNASEKQ6P5S7 137 aaKnown RBP4.94□□□□□ -1.62
RETREG3-207ENST00000589007 DPH3Q96FX2 82 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 MIEN1Q9BRT3 115 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 HSPB8Q9UJY1 196 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 LAMTOR2Q9Y2Q5 125 aa4.94□□□□□ -1.62
RETREG3-207ENST00000589007 IGLV1-50A0A075B6I6 118 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 H0Y9J4 135 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 RPL36AP83881 106 aaKnown RBP4.93□□□□□ -1.62
RETREG3-207ENST00000589007 GAGE6Q13070 117 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 HIGD2BQ4VC39 106 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 FAM104BQ5XKR9 115 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 NRACQ8N912 160 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 RPL36ALQ969Q0 106 aaKnown RBP4.93□□□□□ -1.62
RETREG3-207ENST00000589007 C2orf88Q9BSF0 95 aa4.93□□□□□ -1.62
RETREG3-207ENST00000589007 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 PET117Q6UWS5 81 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 FA2HQ7L5A8 372 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 ORMDL3Q8N138 153 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 FAM19A2Q8N3H0 131 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 CHCHD5Q9BSY4 110 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 AP5S1Q9NUS5 200 aa4.92□□□□□ -1.62
RETREG3-207ENST00000589007 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
RETREG3-207ENST00000589007 TRAV8-4A0A0B4J246 113 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 IGHV1-24A0A0C4DH33 117 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 D6R8Y8 96 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 M0R143 59 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 NPYP01303 97 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 SMIM15Q7Z3B0 74 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 URB1-AS1Q96HZ7 61 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 PRELID3AQ96N28 172 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 MAP1LC3CQ9BXW4 147 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 UQCR10Q9UDW1 63 aa4.91□□□□□ -1.62
RETREG3-207ENST00000589007 SDHAF1A6NFY7 115 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 SYS1-DBNDD2H3BUS1 97 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 TSHBP01222 138 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 IGLV7-43P04211 117 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 CKS2P33552 79 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 SPATA45Q537H7 98 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 PAM16Q9Y3D7 125 aa4.9□□□□□ -1.63
RETREG3-207ENST00000589007 USH2AO75445 5202 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.89□□□□□ -1.63
RETREG3-207ENST00000589007 TRBV6-5A0A0K0K1A5 114 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 A0A1B0GUV1 79 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 IGKV2-29A2NJV5 120 aaPredicted RBP4.89□□□□□ -1.63
RETREG3-207ENST00000589007 LINC01546A6NGU7 62 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 HSBP1L1C9JCN9 74 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 TNFRSF6BO95407 300 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 IGLC3P0DOY3 106 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
RETREG3-207ENST00000589007 PTTG1IPP53801 180 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
RETREG3-207ENST00000589007 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 TMEM97Q5BJF2 176 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 LINC00526Q96FQ7 95 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 MRAP2Q96G30 205 aa4.89□□□□□ -1.63
RETREG3-207ENST00000589007 MAP1LC3AQ9H492 121 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms