RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 HERVK_113P63121 156 aa9.76□□□□□ -0.85
NPC1-207ENST00000588867 CHCHD10Q8WYQ3 142 aaPredicted RBP9.76□□□□□ -0.85
NPC1-207ENST00000588867 LYSTQ99698 3801 aa9.76□□□□□ -0.85
NPC1-207ENST00000588867 CDPF1Q6NVV7 123 aa9.75□□□□□ -0.85
NPC1-207ENST00000588867 FAM19A3Q7Z5A8 133 aa9.75□□□□□ -0.85
NPC1-207ENST00000588867 TRAV8-4A0A0B4J246 113 aa9.75□□□□□ -0.85
NPC1-207ENST00000588867 K7EP13 123 aa9.75□□□□□ -0.85
NPC1-207ENST00000588867 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
NPC1-207ENST00000588867 CDKN2A-AS1Q9UH64 79 aa9.75□□□□□ -0.85
NPC1-207ENST00000588867 IGKV2D-24A0A075B6R9 120 aa9.74□□□□□ -0.85
NPC1-207ENST00000588867 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
NPC1-207ENST00000588867 hDV102S1A0JD36 115 aa9.74□□□□□ -0.85
NPC1-207ENST00000588867 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
NPC1-207ENST00000588867 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
NPC1-207ENST00000588867 STPG4Q8N801 248 aa9.74□□□□□ -0.85
NPC1-207ENST00000588867 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
NPC1-207ENST00000588867 NBDYA0A0U1RRE5 68 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 M0R2N4 97 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 C1orf43Q9BWL3 253 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
NPC1-207ENST00000588867 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
NPC1-207ENST00000588867 IGHV3OR16-9A0A0B4J2B5 98 aa9.72□□□□□ -0.85
NPC1-207ENST00000588867 HSBP1L1C9JCN9 74 aa9.72□□□□□ -0.85
NPC1-207ENST00000588867 TTC32Q5I0X7 151 aa9.72□□□□□ -0.85
NPC1-207ENST00000588867 H3BRM9 83 aa9.72□□□□□ -0.85
NPC1-207ENST00000588867 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
NPC1-207ENST00000588867 IGLV5-45A0A087WSX0 123 aa9.71□□□□□ -0.86
NPC1-207ENST00000588867 A0A1B0GV90 55 aa9.71□□□□□ -0.86
NPC1-207ENST00000588867 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
NPC1-207ENST00000588867 VAMP8Q9BV40 100 aa9.71□□□□□ -0.86
NPC1-207ENST00000588867 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.86
NPC1-207ENST00000588867 TSTD3H0UI37 97 aa9.7□□□□□ -0.86
NPC1-207ENST00000588867 FOXI1Q12951 378 aa9.7□□□□□ -0.86
NPC1-207ENST00000588867 TMEM223A0PJW6 202 aa9.7□□□□□ -0.86
NPC1-207ENST00000588867 RMI2Q96E14 147 aa9.7□□□□□ -0.86
NPC1-207ENST00000588867 COX7A2LO14548 114 aa9.69□□□□□ -0.86
NPC1-207ENST00000588867 DDTP30046 118 aa9.69□□□□□ -0.86
NPC1-207ENST00000588867 HERVK_113P61574 105 aa9.69□□□□□ -0.86
NPC1-207ENST00000588867 A0A087WZ39 114 aa9.68□□□□□ -0.86
NPC1-207ENST00000588867 MALP21145 153 aa9.68□□□□□ -0.86
NPC1-207ENST00000588867 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
NPC1-207ENST00000588867 SPATA45Q537H7 98 aa9.68□□□□□ -0.86
NPC1-207ENST00000588867 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
NPC1-207ENST00000588867 SMIM1B2RUZ4 78 aa9.66□□□□□ -0.86
NPC1-207ENST00000588867 NMUP48645 174 aa9.66□□□□□ -0.86
NPC1-207ENST00000588867 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
NPC1-207ENST00000588867 IGKV2D-26A0A0A0MRZ7 120 aa9.65□□□□□ -0.86
NPC1-207ENST00000588867 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.86
NPC1-207ENST00000588867 E9PLD3 99 aa9.65□□□□□ -0.86
NPC1-207ENST00000588867 PSCAO43653 123 aa9.65□□□□□ -0.86
NPC1-207ENST00000588867 COX11Q9Y6N1 276 aa9.65□□□□□ -0.86
NPC1-207ENST00000588867 Q6ZR54 194 aa9.65□□□□□ -0.87
NPC1-207ENST00000588867 TOMM7Q9P0U1 55 aa9.65□□□□□ -0.87
NPC1-207ENST00000588867 APOMO95445 188 aa9.64□□□□□ -0.87
NPC1-207ENST00000588867 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
NPC1-207ENST00000588867 LEPROTO15243 131 aa9.63□□□□□ -0.87
NPC1-207ENST00000588867 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
NPC1-207ENST00000588867 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
NPC1-207ENST00000588867 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
NPC1-207ENST00000588867 VPS13DQ5THJ4 4388 aa9.62□□□□□ -0.87
NPC1-207ENST00000588867 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
NPC1-207ENST00000588867 J3QQQ9 107 aa9.62□□□□□ -0.87
NPC1-207ENST00000588867 PLEKHB2Q96CS7 222 aa9.62□□□□□ -0.87
NPC1-207ENST00000588867 TTTY13Q9BZ97 58 aa9.62□□□□□ -0.87
NPC1-207ENST00000588867 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
NPC1-207ENST00000588867 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 C6orf223Q8N319 242 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 PRSS2P07478 247 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 PCP2Q8IVA1 136 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 PRO1933Q9H354 126 aa9.61□□□□□ -0.87
NPC1-207ENST00000588867 LECT2O14960 151 aa9.6□□□□□ -0.87
NPC1-207ENST00000588867 LCE6AA0A183 80 aa9.6□□□□□ -0.87
NPC1-207ENST00000588867 HIGD2BQ4VC39 106 aa9.6□□□□□ -0.87
NPC1-207ENST00000588867 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
NPC1-207ENST00000588867 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
NPC1-207ENST00000588867 LINC00526Q96FQ7 95 aa9.6□□□□□ -0.87
NPC1-207ENST00000588867 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
NPC1-207ENST00000588867 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
NPC1-207ENST00000588867 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
NPC1-207ENST00000588867 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
NPC1-207ENST00000588867 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
NPC1-207ENST00000588867 COX8AP10176 69 aa9.58□□□□□ -0.88
NPC1-207ENST00000588867 Q8IZM0 81 aa9.58□□□□□ -0.88
NPC1-207ENST00000588867 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
NPC1-207ENST00000588867 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
NPC1-207ENST00000588867 CKS1BP61024 79 aa9.57□□□□□ -0.88
NPC1-207ENST00000588867 KIAA0087Q14695 138 aa9.57□□□□□ -0.88
NPC1-207ENST00000588867 TP73-AS1Q9UF72 201 aa9.57□□□□□ -0.88
NPC1-207ENST00000588867 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
NPC1-207ENST00000588867 KMT2AQ03164 3969 aa9.56□□□□□ -0.88
NPC1-207ENST00000588867 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
NPC1-207ENST00000588867 MYMXA0A1B0GTQ4 84 aa9.56□□□□□ -0.88
NPC1-207ENST00000588867 WFDC2Q14508 124 aa9.55□□□□□ -0.88
NPC1-207ENST00000588867 SLC25A34Q6PIV7 304 aa9.55□□□□□ -0.88
NPC1-207ENST00000588867 ZNF625Q96I27 306 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms