RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 IGLV10-54A0A075B6I4 117 aa7.61□□□□□ -1.19
VMP1-207ENST00000588131 CRPP02741 224 aa7.61□□□□□ -1.19
VMP1-207ENST00000588131 SS18Q15532 418 aa7.61□□□□□ -1.19
VMP1-207ENST00000588131 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
VMP1-207ENST00000588131 STPG4Q8N801 248 aa7.61□□□□□ -1.19
VMP1-207ENST00000588131 C12orf57Q99622 126 aa7.61□□□□□ -1.19
VMP1-207ENST00000588131 GEMIN7Q9H840 131 aaKnown RBP7.61□□□□□ -1.19
VMP1-207ENST00000588131 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
VMP1-207ENST00000588131 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 TRAV9-2A0A087WT02 112 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 IBA57-AS1B1ANH7 110 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 CCL25O15444 150 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 XCL1P47992 114 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 HERVK_113P63121 156 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 ANKRD39Q53RE8 183 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 TMEM170BQ5T4T1 132 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 CHCHD10Q8WYQ3 142 aaPredicted RBP7.6□□□□□ -1.19
VMP1-207ENST00000588131 KRTAP1-5Q9BYS1 174 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 ALMS1Q8TCU4 4167 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 LYSTQ99698 3801 aa7.6□□□□□ -1.19
VMP1-207ENST00000588131 SEC11AP67812 179 aa7.59□□□□□ -1.19
VMP1-207ENST00000588131 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
VMP1-207ENST00000588131 VAMP8Q9BV40 100 aa7.59□□□□□ -1.19
VMP1-207ENST00000588131 PAM16Q9Y3D7 125 aa7.59□□□□□ -1.19
VMP1-207ENST00000588131 IGHV3OR16-9A0A0B4J2B5 98 aa7.58□□□□□ -1.2
VMP1-207ENST00000588131 TMEM223A0PJW6 202 aa7.58□□□□□ -1.2
VMP1-207ENST00000588131 MIAQ16674 131 aa7.58□□□□□ -1.2
VMP1-207ENST00000588131 Q9HAA7 133 aa7.58□□□□□ -1.2
VMP1-207ENST00000588131 IGHV3-64A0A075B6Q5 118 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 IGKV2D-26A0A0A0MRZ7 120 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 GAGE12HA6NDE8 117 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 FOXI1Q12951 378 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 SPATA45Q537H7 98 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 KRTAP26-1Q6PEX3 210 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 CD164L2Q6UWJ8 174 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 C5orf38Q86SI9 138 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 C10orf126Q8N4M7 172 aa7.57□□□□□ -1.2
VMP1-207ENST00000588131 TRAV8-3A0A0A6YYJ7 113 aa7.56□□□□□ -1.2
VMP1-207ENST00000588131 HSBP1L1C9JCN9 74 aa7.56□□□□□ -1.2
VMP1-207ENST00000588131 S100A12P80511 92 aa7.56□□□□□ -1.2
VMP1-207ENST00000588131 A0A087WZ39 114 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 NBDYA0A0U1RRE5 68 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 E9PLD3 99 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 H3BRM9 83 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 LY6G6CO95867 125 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 C1orf43Q9BWL3 253 aa7.55□□□□□ -1.2
VMP1-207ENST00000588131 IGKV2D-24A0A075B6R9 120 aa7.54□□□□□ -1.2
VMP1-207ENST00000588131 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
VMP1-207ENST00000588131 K7EP13 123 aa7.54□□□□□ -1.2
VMP1-207ENST00000588131 TSPEAR-AS2P59090 65 aa7.54□□□□□ -1.2
VMP1-207ENST00000588131 HERVK_113P61574 105 aa7.54□□□□□ -1.2
VMP1-207ENST00000588131 DNAH6Q9C0G6 4158 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 IGLV5-39A0A0G2JS06 123 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 M0R2N4 97 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 COX7A2LO14548 114 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 NMUP48645 174 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 TTC32Q5I0X7 151 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 TTTY13Q9BZ97 58 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 PRO1933Q9H354 126 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
VMP1-207ENST00000588131 LEPROTO15243 131 aa7.52□□□□□ -1.21
VMP1-207ENST00000588131 PCP2Q8IVA1 136 aa7.52□□□□□ -1.21
VMP1-207ENST00000588131 LINC01561Q8N1V8 128 aa7.52□□□□□ -1.21
VMP1-207ENST00000588131 C14orf144Q96I85 54 aa7.52□□□□□ -1.21
VMP1-207ENST00000588131 MAPKAPK5-AS1Q8N8E1 139 aa7.51□□□□□ -1.21
VMP1-207ENST00000588131 RMI2Q96E14 147 aa7.51□□□□□ -1.21
VMP1-207ENST00000588131 TENM2Q9NT68 2774 aa7.5□□□□□ -1.21
VMP1-207ENST00000588131 J3QQQ9 107 aa7.5□□□□□ -1.21
VMP1-207ENST00000588131 MALP21145 153 aa7.5□□□□□ -1.21
VMP1-207ENST00000588131 Q6ZR54 194 aa7.5□□□□□ -1.21
VMP1-207ENST00000588131 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
VMP1-207ENST00000588131 COX8AP10176 69 aa7.49□□□□□ -1.21
VMP1-207ENST00000588131 LGALS3P17931 250 aaKnown RBP7.49□□□□□ -1.21
VMP1-207ENST00000588131 C15orf56Q8N910 161 aa7.49□□□□□ -1.21
VMP1-207ENST00000588131 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
VMP1-207ENST00000588131 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
VMP1-207ENST00000588131 TOMM7Q9P0U1 55 aa7.49□□□□□ -1.21
VMP1-207ENST00000588131 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
VMP1-207ENST00000588131 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
VMP1-207ENST00000588131 BOD1L2Q8IYS8 172 aa7.48□□□□□ -1.21
VMP1-207ENST00000588131 TM2D2Q9BX73 214 aa7.48□□□□□ -1.21
VMP1-207ENST00000588131 A6NJY4 79 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 ZNF815PA8K554 130 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 APOMO95445 188 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 SPAG11BQ08648 103 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 HIGD2BQ4VC39 106 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
VMP1-207ENST00000588131 Q8IZM0 81 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
VMP1-207ENST00000588131 DNAH2Q9P225 4427 aa7.46□□□□□ -1.21
VMP1-207ENST00000588131 SACSQ9NZJ4 4579 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 MYMXA0A1B0GTQ4 84 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 WFDC2Q14508 124 aa7.46□□□□□ -1.22
VMP1-207ENST00000588131 SLC25A34Q6PIV7 304 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms