RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
CLPTM1-207ENST00000587537 CHAC1Q9BUX1 264 aa6.95□□□□□ -1.3
CLPTM1-207ENST00000587537 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
CLPTM1-207ENST00000587537 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 IGHV3OR16-9A0A0B4J2B5 98 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 IGKV3OR2-268A0A0C4DH90 116 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 H0Y8G0 127 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 COX7A2LO14548 114 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 HERVK_113P61574 105 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 C6orf223Q8N319 242 aa6.94□□□□□ -1.3
CLPTM1-207ENST00000587537 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 A0A087WZ39 114 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 A0A0J9YXV3 536 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 XCL1P47992 114 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 JOSD1Q15040 202 aaPredicted RBP6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 C1orf134Q5TEV5 83 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 Q9HAA7 133 aa6.93□□□□□ -1.3
CLPTM1-207ENST00000587537 F8WDY8 70 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 PSCAO43653 123 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 MALP21145 153 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 FOXI1Q12951 378 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 KRTAP1-5Q9BYS1 174 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
CLPTM1-207ENST00000587537 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 HSBP1L1C9JCN9 74 aa6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 LYSTQ99698 3801 aa6.91□□□□□ -1.3
CLPTM1-207ENST00000587537 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.3
CLPTM1-207ENST00000587537 KRTAP26-1Q6PEX3 210 aa6.9□□□□□ -1.3
CLPTM1-207ENST00000587537 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
CLPTM1-207ENST00000587537 M0R2N4 97 aa6.89□□□□□ -1.31
CLPTM1-207ENST00000587537 SMIM6P0DI80 62 aa6.89□□□□□ -1.31
CLPTM1-207ENST00000587537 CXCL5P42830 114 aa6.89□□□□□ -1.31
CLPTM1-207ENST00000587537 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 EREGO14944 169 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 PRSS2P07478 247 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 COX6A2Q02221 97 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 Q8IZM0 81 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
CLPTM1-207ENST00000587537 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 LOC105371267A0A1B0GV96 52 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 E9PLD3 99 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 NMUP48645 174 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 S100A12P80511 92 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 LINC00336Q6ZUF6 198 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 C5orf38Q86SI9 138 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
CLPTM1-207ENST00000587537 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
CLPTM1-207ENST00000587537 LEPROTO15243 131 aa6.86□□□□□ -1.31
CLPTM1-207ENST00000587537 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
CLPTM1-207ENST00000587537 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
CLPTM1-207ENST00000587537 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
CLPTM1-207ENST00000587537 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
CLPTM1-207ENST00000587537 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
CLPTM1-207ENST00000587537 VAMP8Q9BV40 100 aa6.85□□□□□ -1.31
CLPTM1-207ENST00000587537 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 CKS1BP61024 79 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 HERV-K104P63124 156 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 C6orf226Q5I0X4 101 aa6.84□□□□□ -1.31
CLPTM1-207ENST00000587537 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
CLPTM1-207ENST00000587537 J3QQQ9 107 aa6.83□□□□□ -1.32
CLPTM1-207ENST00000587537 NDUFA1O15239 70 aa6.83□□□□□ -1.32
CLPTM1-207ENST00000587537 LGALS3P17931 250 aaKnown RBP6.83□□□□□ -1.32
CLPTM1-207ENST00000587537 C15orf56Q8N910 161 aa6.83□□□□□ -1.32
CLPTM1-207ENST00000587537 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
CLPTM1-207ENST00000587537 MYMXA0A1B0GTQ4 84 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 hDV102S1A0JD36 115 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 GCSHP23434 173 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 CNBPP62633 177 aaKnown RBP6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 RNF151Q2KHN1 245 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 STPG4Q8N801 248 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
CLPTM1-207ENST00000587537 A0A087WTM6 91 aa6.81□□□□□ -1.32
CLPTM1-207ENST00000587537 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
CLPTM1-207ENST00000587537 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
CLPTM1-207ENST00000587537 CAMK2N2Q96S95 79 aa6.81□□□□□ -1.32
CLPTM1-207ENST00000587537 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
CLPTM1-207ENST00000587537 KMT2AQ03164 3969 aa6.81□□□□□ -1.32
CLPTM1-207ENST00000587537 RTL8CO15255 209 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms