RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.8
CACNA1A-209ENST00000587525 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
CACNA1A-209ENST00000587525 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.81
CACNA1A-209ENST00000587525 H7C423 109 aa10.02□□□□□ -0.81
CACNA1A-209ENST00000587525 SLPIP03973 132 aa10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 MED14OSP0DP75 135 aa10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 MIR7-3HGQ8N6C7 128 aa10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 C9orf85Q96MD7 179 aa10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 Q6YL49 198 aa10.01□□□□□ -0.81
CACNA1A-209ENST00000587525 RBMY1BA6NDE4 496 aaKnown RBP10□□□□□ -0.81
CACNA1A-209ENST00000587525 RBMY1EA6NEQ0 496 aaKnown RBP10□□□□□ -0.81
CACNA1A-209ENST00000587525 RBMY1DP0C7P1 496 aaKnown RBP10□□□□□ -0.81
CACNA1A-209ENST00000587525 C14orf132Q9NPU4 83 aa10□□□□□ -0.81
CACNA1A-209ENST00000587525 GYPEP15421 78 aa10□□□□□ -0.81
CACNA1A-209ENST00000587525 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
CACNA1A-209ENST00000587525 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
CACNA1A-209ENST00000587525 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
CACNA1A-209ENST00000587525 NIPBLQ6KC79 2804 aaeCLIP10□□□□□ -0.81
CACNA1A-209ENST00000587525 J3QLI3 93 aa10□□□□□ -0.81
CACNA1A-209ENST00000587525 COX6A2Q02221 97 aa10□□□□□ -0.81
CACNA1A-209ENST00000587525 DEFB135Q30KP9 77 aa10□□□□□ -0.81
CACNA1A-209ENST00000587525 HERVK_113P63121 156 aa9.99□□□□□ -0.81
CACNA1A-209ENST00000587525 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
CACNA1A-209ENST00000587525 K7EQD1 137 aa9.99□□□□□ -0.81
CACNA1A-209ENST00000587525 A0A1B0GX51 115 aa9.98□□□□□ -0.81
CACNA1A-209ENST00000587525 SND1-IT1Q9HBX3 110 aa9.98□□□□□ -0.81
CACNA1A-209ENST00000587525 S100A7L2Q5SY68 101 aa9.98□□□□□ -0.81
CACNA1A-209ENST00000587525 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
CACNA1A-209ENST00000587525 ODF3L2Q3SX64 289 aa9.97□□□□□ -0.81
CACNA1A-209ENST00000587525 hADV29S1A0JD25 119 aa9.97□□□□□ -0.81
CACNA1A-209ENST00000587525 A0A0B4J2C4 111 aa9.97□□□□□ -0.81
CACNA1A-209ENST00000587525 MIAQ16674 131 aa9.97□□□□□ -0.81
CACNA1A-209ENST00000587525 LECT2O14960 151 aa9.96□□□□□ -0.82
CACNA1A-209ENST00000587525 TMEM86BQ8N661 226 aa9.95□□□□□ -0.82
CACNA1A-209ENST00000587525 BSNQ9UPA5 3926 aa9.95□□□□□ -0.82
CACNA1A-209ENST00000587525 UBE2D4Q9Y2X8 147 aa9.95□□□□□ -0.82
CACNA1A-209ENST00000587525 CSMD2Q7Z408 3487 aa9.95□□□□□ -0.82
CACNA1A-209ENST00000587525 EIF4EBP3O60516 100 aaPredicted RBP9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 HAMPP81172 84 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 COPS9Q8WXC6 57 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 TRBV6-5A0A0K0K1A5 114 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 H3BT86 120 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 TMEM126AQ9H061 195 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
CACNA1A-209ENST00000587525 WFDC9Q8NEX5 89 aa9.93□□□□□ -0.82
CACNA1A-209ENST00000587525 LAMTOR3Q9UHA4 124 aa9.93□□□□□ -0.82
CACNA1A-209ENST00000587525 A0A087WVE0 104 aa9.93□□□□□ -0.82
CACNA1A-209ENST00000587525 TMEM89A2RUT3 159 aa9.93□□□□□ -0.82
CACNA1A-209ENST00000587525 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
CACNA1A-209ENST00000587525 SS18Q15532 418 aa9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 DAD1P61803 113 aa9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 PRR3P79522 188 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 ZNF843Q8N446 348 aa9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 M0QXV9 152 aa9.92□□□□□ -0.82
CACNA1A-209ENST00000587525 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
CACNA1A-209ENST00000587525 NCR3O14931 201 aa9.91□□□□□ -0.82
CACNA1A-209ENST00000587525 TRACP01848 142 aa9.91□□□□□ -0.82
CACNA1A-209ENST00000587525 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
CACNA1A-209ENST00000587525 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
CACNA1A-209ENST00000587525 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
CACNA1A-209ENST00000587525 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
CACNA1A-209ENST00000587525 CHCHD7Q9BUK0 85 aa9.9□□□□□ -0.82
CACNA1A-209ENST00000587525 TRAV23DV6A0A075B6W5 121 aa9.9□□□□□ -0.83
CACNA1A-209ENST00000587525 NHLRC4P0CG21 123 aaPredicted RBP9.9□□□□□ -0.83
CACNA1A-209ENST00000587525 STAB1Q9NY15 2570 aa9.89□□□□□ -0.83
CACNA1A-209ENST00000587525 LST1O00453 97 aa9.89□□□□□ -0.83
CACNA1A-209ENST00000587525 LINC01006Q8NI28 216 aa9.89□□□□□ -0.83
CACNA1A-209ENST00000587525 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
CACNA1A-209ENST00000587525 Q8N2B8 174 aa9.88□□□□□ -0.83
CACNA1A-209ENST00000587525 TIRAPP58753 221 aa9.88□□□□□ -0.83
CACNA1A-209ENST00000587525 LINC00269Q8N2A0 174 aa9.88□□□□□ -0.83
CACNA1A-209ENST00000587525 MRPS36P82909 103 aaKnown RBP9.87□□□□□ -0.83
CACNA1A-209ENST00000587525 KLK12Q9UKR0 248 aa9.87□□□□□ -0.83
CACNA1A-209ENST00000587525 COL6A5A8TX70 2615 aa9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 COX7A2LO14548 114 aa9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 PRB2P02812 416 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 FAM222AQ5U5X8 452 aa9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 FAM19A4Q96LR4 140 aa9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 LINC00643Q86TS7 51 aa9.86□□□□□ -0.83
CACNA1A-209ENST00000587525 RNF152Q8N8N0 203 aa9.85□□□□□ -0.83
CACNA1A-209ENST00000587525 DSCR8Q96T75 97 aa9.85□□□□□ -0.83
CACNA1A-209ENST00000587525 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
CACNA1A-209ENST00000587525 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
CACNA1A-209ENST00000587525 APCP25054 2843 aa9.84□□□□□ -0.83
CACNA1A-209ENST00000587525 FAM110AQ9BQ89 295 aa9.84□□□□□ -0.83
CACNA1A-209ENST00000587525 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
CACNA1A-209ENST00000587525 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
CACNA1A-209ENST00000587525 MRAPQ8TCY5 172 aa9.83□□□□□ -0.84
CACNA1A-209ENST00000587525 TRAV13-2A0A0B4J235 113 aa9.83□□□□□ -0.84
CACNA1A-209ENST00000587525 J3QKU1 62 aa9.83□□□□□ -0.84
CACNA1A-209ENST00000587525 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
CACNA1A-209ENST00000587525 C3orf22Q8N5N4 141 aa9.82□□□□□ -0.84
CACNA1A-209ENST00000587525 SMIM1B2RUZ4 78 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms