RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 F8WDY8 70 aa9.76□□□□□ -0.85
NPC1-205ENST00000587163 PPP1R17O96001 155 aa9.76□□□□□ -0.85
NPC1-205ENST00000587163 RIGQ13278 110 aa9.75□□□□□ -0.85
NPC1-205ENST00000587163 TMEM241Q24JQ0 296 aa9.75□□□□□ -0.85
NPC1-205ENST00000587163 MRPL51Q4U2R6 128 aaKnown RBP9.75□□□□□ -0.85
NPC1-205ENST00000587163 TMEM18Q96B42 140 aa9.75□□□□□ -0.85
NPC1-205ENST00000587163 OSTCQ9NRP0 149 aa9.75□□□□□ -0.85
NPC1-205ENST00000587163 PPP1R2P9O14990 202 aa9.74□□□□□ -0.85
NPC1-205ENST00000587163 UBE2D1P51668 147 aa9.74□□□□□ -0.85
NPC1-205ENST00000587163 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
NPC1-205ENST00000587163 SMDT1Q9H4I9 107 aa9.74□□□□□ -0.85
NPC1-205ENST00000587163 V9GYV3 84 aa9.74□□□□□ -0.85
NPC1-205ENST00000587163 M0QXV9 152 aa9.73□□□□□ -0.85
NPC1-205ENST00000587163 UBE2BP63146 152 aa9.73□□□□□ -0.85
NPC1-205ENST00000587163 TCTE3Q8IZS6 198 aa9.73□□□□□ -0.85
NPC1-205ENST00000587163 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
NPC1-205ENST00000587163 BLOC1S1P78537 153 aa9.72□□□□□ -0.85
NPC1-205ENST00000587163 KIAA0087Q14695 138 aa9.72□□□□□ -0.85
NPC1-205ENST00000587163 FAM104BQ5XKR9 115 aa9.72□□□□□ -0.85
NPC1-205ENST00000587163 TRBV24-1A0A075B6N3 115 aa9.71□□□□□ -0.86
NPC1-205ENST00000587163 ALKAL2Q6UX46 152 aa9.71□□□□□ -0.86
NPC1-205ENST00000587163 C20orf78Q9BR46 151 aa9.71□□□□□ -0.86
NPC1-205ENST00000587163 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
NPC1-205ENST00000587163 ZNF727A8MUV8 499 aa9.7□□□□□ -0.86
NPC1-205ENST00000587163 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
NPC1-205ENST00000587163 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
NPC1-205ENST00000587163 C9orf129Q5T035 196 aaKnown RBP9.7□□□□□ -0.86
NPC1-205ENST00000587163 C2orf82Q6UX34 121 aa9.7□□□□□ -0.86
NPC1-205ENST00000587163 SPANXA1Q9NS26 97 aa9.7□□□□□ -0.86
NPC1-205ENST00000587163 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
NPC1-205ENST00000587163 TSPAN13O95857 204 aa9.69□□□□□ -0.86
NPC1-205ENST00000587163 HBBP68871 147 aa9.69□□□□□ -0.86
NPC1-205ENST00000587163 EIF5A2Q9GZV4 153 aaKnown RBP9.69□□□□□ -0.86
NPC1-205ENST00000587163 CARHSP1Q9Y2V2 147 aaKnown RBP9.69□□□□□ -0.86
NPC1-205ENST00000587163 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
NPC1-205ENST00000587163 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
NPC1-205ENST00000587163 CKS2P33552 79 aa9.68□□□□□ -0.86
NPC1-205ENST00000587163 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
NPC1-205ENST00000587163 NAT8BQ9UHF3 227 aa9.68□□□□□ -0.86
NPC1-205ENST00000587163 NDUFC2-KCTD14E9PQ53 114 aa9.67□□□□□ -0.86
NPC1-205ENST00000587163 TCAPO15273 167 aa9.67□□□□□ -0.86
NPC1-205ENST00000587163 SRP19P09132 144 aaKnown RBP9.67□□□□□ -0.86
NPC1-205ENST00000587163 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
NPC1-205ENST00000587163 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
NPC1-205ENST00000587163 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
NPC1-205ENST00000587163 ZNF861PO60384 105 aa9.66□□□□□ -0.86
NPC1-205ENST00000587163 FAM74A3Q4VXF1 159 aa9.66□□□□□ -0.86
NPC1-205ENST00000587163 LINC00242Q5T6M2 205 aa9.66□□□□□ -0.86
NPC1-205ENST00000587163 D6R8Y8 96 aa9.64□□□□□ -0.87
NPC1-205ENST00000587163 NPYP01303 97 aa9.64□□□□□ -0.87
NPC1-205ENST00000587163 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
NPC1-205ENST00000587163 A0A087X002 238 aa9.63□□□□□ -0.87
NPC1-205ENST00000587163 SMIM27A0A1W2PRY6 76 aa9.63□□□□□ -0.87
NPC1-205ENST00000587163 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
NPC1-205ENST00000587163 PACRGQ96M98 296 aaPredicted RBP9.62□□□□□ -0.87
NPC1-205ENST00000587163 C22orf24Q9Y442 160 aa9.62□□□□□ -0.87
NPC1-205ENST00000587163 A0A1B0GW15 77 aa9.61□□□□□ -0.87
NPC1-205ENST00000587163 LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
NPC1-205ENST00000587163 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
NPC1-205ENST00000587163 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
NPC1-205ENST00000587163 ADIRFQ15847 76 aa9.6□□□□□ -0.87
NPC1-205ENST00000587163 ZC2HC1BQ5TFG8 222 aa9.6□□□□□ -0.87
NPC1-205ENST00000587163 MRPL54Q6P161 138 aaKnown RBP9.6□□□□□ -0.87
NPC1-205ENST00000587163 CTDSP1Q9GZU7 261 aa9.6□□□□□ -0.87
NPC1-205ENST00000587163 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
NPC1-205ENST00000587163 NUPR1O60356 82 aa9.59□□□□□ -0.87
NPC1-205ENST00000587163 XAGE1AQ9HD64 81 aa9.59□□□□□ -0.87
NPC1-205ENST00000587163 KRTAP9-6A0A140TA67 174 aa9.58□□□□□ -0.88
NPC1-205ENST00000587163 A0A1B0GXF2 115 aa9.58□□□□□ -0.88
NPC1-205ENST00000587163 C9JQL5 133 aa9.58□□□□□ -0.88
NPC1-205ENST00000587163 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
NPC1-205ENST00000587163 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
NPC1-205ENST00000587163 F8W036 122 aa9.57□□□□□ -0.88
NPC1-205ENST00000587163 RAB5AP20339 215 aa9.57□□□□□ -0.88
NPC1-205ENST00000587163 PPBPP02775 128 aa9.56□□□□□ -0.88
NPC1-205ENST00000587163 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
NPC1-205ENST00000587163 TYMSOSQ8TAI1 123 aa9.56□□□□□ -0.88
NPC1-205ENST00000587163 ANAPC11Q9NYG5 84 aa9.56□□□□□ -0.88
NPC1-205ENST00000587163 TOMM7Q9P0U1 55 aa9.56□□□□□ -0.88
NPC1-205ENST00000587163 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
NPC1-205ENST00000587163 CRYGAP11844 174 aa9.55□□□□□ -0.88
NPC1-205ENST00000587163 CKS1BP61024 79 aa9.55□□□□□ -0.88
NPC1-205ENST00000587163 TEX43Q6ZNM6 134 aa9.55□□□□□ -0.88
NPC1-205ENST00000587163 LINC00173Q6ZV60 143 aa9.55□□□□□ -0.88
NPC1-205ENST00000587163 BCE1O60756 84 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 S100A8P05109 93 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 PRSS2P07478 247 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 RPL28P46779 137 aaKnown RBP9.54□□□□□ -0.88
NPC1-205ENST00000587163 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 Q6ZN92 141 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 TMEM136Q6ZRR5 245 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 ORMDL3Q8N138 153 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 RETNLBQ9BQ08 111 aa9.54□□□□□ -0.88
NPC1-205ENST00000587163 KRTAP13-2Q52LG2 175 aa9.53□□□□□ -0.88
NPC1-205ENST00000587163 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
NPC1-205ENST00000587163 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
NPC1-205ENST00000587163 AMELXQ99217 191 aa9.53□□□□□ -0.88
NPC1-205ENST00000587163 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
NPC1-205ENST00000587163 SRSF3P84103 164 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms