RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 OR10D4PQ8NGN7 298 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 FAM104AQ969W3 186 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 C2orf48Q96LS8 159 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
SMARCA4-209ENST00000586122 SRRM2Q9UQ35 2752 aaKnown RBP6.65□□□□□ -1.35
SMARCA4-209ENST00000586122 VPS13BQ7Z7G8 4022 aa6.65□□□□□ -1.35
SMARCA4-209ENST00000586122 DMBT1Q9UGM3 2413 aaPredicted RBP6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 TGIF2-C20orf24A0A0A6YYL0 155 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 IGHV3OR16-9A0A0B4J2B5 98 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 COX6A2Q02221 97 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 TEX43Q6ZNM6 134 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
SMARCA4-209ENST00000586122 IGLV4-69A0A075B6H9 119 aa6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 A0A087WYN8 130 aa6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 SNAPINO95295 136 aa6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 SVBPQ8N300 66 aa6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 OPRPNQ99935 248 aaPredicted RBP6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
SMARCA4-209ENST00000586122 PANO1I0J062 215 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 RPL37AP61513 92 aaKnown RBP6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 SEC11AP67812 179 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 RNF151Q2KHN1 245 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 LINC01561Q8N1V8 128 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 PRSS3P2Q8NHM4 247 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 CAMK2N2Q96S95 79 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 VCX2Q9H322 139 aa6.62□□□□□ -1.35
SMARCA4-209ENST00000586122 A0A087WZ39 114 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 APOC3P02656 99 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 MAJINQ3KP22 176 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 KIAA1644Q3SXP7 199 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 LINC00242Q5T6M2 205 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 ORAOV1Q8WV07 137 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 AMELXQ99217 191 aa6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
SMARCA4-209ENST00000586122 A0A096LNI7 61 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 LINC01546A6NGU7 62 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 NDUFA1O15239 70 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 UBE2D1P51668 147 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 FABP9Q0Z7S8 132 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 Q6ZRU5 148 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 C7orf33Q8WU49 177 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 MRPL35Q9NZE8 188 aaKnown RBP6.6□□□□□ -1.35
SMARCA4-209ENST00000586122 ERASQ7Z444 233 aa6.59□□□□□ -1.35
SMARCA4-209ENST00000586122 FAM19A3Q7Z5A8 133 aa6.59□□□□□ -1.35
SMARCA4-209ENST00000586122 STPG4Q8N801 248 aa6.59□□□□□ -1.35
SMARCA4-209ENST00000586122 SMCO4Q9NRQ5 59 aa6.59□□□□□ -1.35
SMARCA4-209ENST00000586122 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
SMARCA4-209ENST00000586122 HERVK_113P63121 156 aa6.58□□□□□ -1.36
SMARCA4-209ENST00000586122 LINC00173Q6ZV60 143 aa6.58□□□□□ -1.36
SMARCA4-209ENST00000586122 FA2HQ7L5A8 372 aa6.58□□□□□ -1.36
SMARCA4-209ENST00000586122 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
SMARCA4-209ENST00000586122 TRAPPC1Q9Y5R8 145 aa6.57□□□□□ -1.36
SMARCA4-209ENST00000586122 KRTAP29-1A8MX34 341 aaPredicted RBP6.56□□□□□ -1.36
SMARCA4-209ENST00000586122 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
SMARCA4-209ENST00000586122 GEMIN7Q9H840 131 aaKnown RBP6.56□□□□□ -1.36
SMARCA4-209ENST00000586122 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 J3QL48 77 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 OXTP01178 125 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 PRSS2P07478 247 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 RAB5BP61020 215 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 PACRGQ96M98 296 aaPredicted RBP6.55□□□□□ -1.36
SMARCA4-209ENST00000586122 MYCBP2O75592 4640 aa6.54□□□□□ -1.36
SMARCA4-209ENST00000586122 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
SMARCA4-209ENST00000586122 Q8IZM0 81 aa6.54□□□□□ -1.36
SMARCA4-209ENST00000586122 C18orf32Q8TCD1 76 aa6.54□□□□□ -1.36
SMARCA4-209ENST00000586122 TINCRA0A1B0GVN0 87 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 LINC00614P0C842 121 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 CXCL5P42830 114 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 PMVKQ15126 192 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 C6orf48Q9UBA6 75 aa6.53□□□□□ -1.36
SMARCA4-209ENST00000586122 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 HBDP02042 147 aa6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 CKS1BP61024 79 aa6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 PRR3P79522 188 aaKnown RBP6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 C10orf25Q5T742 122 aa6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 CST9LQ9H4G1 147 aa6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
SMARCA4-209ENST00000586122 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
SMARCA4-209ENST00000586122 NDUFC2-KCTD14E9PQ53 114 aa6.51□□□□□ -1.37
SMARCA4-209ENST00000586122 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
SMARCA4-209ENST00000586122 PDZD11Q5EBL8 140 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms