RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TRBV24-1A0A075B6N3 115 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 A0A087WZ39 114 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 H0Y9J4 135 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 CEBPGP53567 150 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 C10orf25Q5T742 122 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 TMEM18Q96B42 140 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 SMIM7Q9BQ49 75 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 V9GYV3 84 aa8.73□□□□□ -1.01
SDF2-202ENST00000585428 PPP1R2P9O14990 202 aa8.72□□□□□ -1.01
SDF2-202ENST00000585428 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
SDF2-202ENST00000585428 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
SDF2-202ENST00000585428 ALKAL2Q6UX46 152 aa8.72□□□□□ -1.01
SDF2-202ENST00000585428 KRTAP7-1Q8IUC3 87 aa8.72□□□□□ -1.01
SDF2-202ENST00000585428 C20orf78Q9BR46 151 aa8.72□□□□□ -1.01
SDF2-202ENST00000585428 LINC00862A6NCI5 91 aa8.71□□□□□ -1.02
SDF2-202ENST00000585428 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
SDF2-202ENST00000585428 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.02
SDF2-202ENST00000585428 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
SDF2-202ENST00000585428 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
SDF2-202ENST00000585428 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
SDF2-202ENST00000585428 NDUFA1O15239 70 aa8.7□□□□□ -1.02
SDF2-202ENST00000585428 RPL39P62891 51 aaKnown RBP8.7□□□□□ -1.02
SDF2-202ENST00000585428 ORAOV1Q8WV07 137 aa8.7□□□□□ -1.02
SDF2-202ENST00000585428 EIF5A2Q9GZV4 153 aaKnown RBP8.7□□□□□ -1.02
SDF2-202ENST00000585428 MUC2Q02817 5179 aa8.7□□□□□ -1.02
SDF2-202ENST00000585428 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
SDF2-202ENST00000585428 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
SDF2-202ENST00000585428 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
SDF2-202ENST00000585428 NAT8BQ9UHF3 227 aa8.69□□□□□ -1.02
SDF2-202ENST00000585428 TCAPO15273 167 aa8.68□□□□□ -1.02
SDF2-202ENST00000585428 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
SDF2-202ENST00000585428 SPANXA1Q9NS26 97 aa8.68□□□□□ -1.02
SDF2-202ENST00000585428 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
SDF2-202ENST00000585428 TNFRSF6BO95407 300 aa8.67□□□□□ -1.02
SDF2-202ENST00000585428 FAM74A3Q4VXF1 159 aa8.67□□□□□ -1.02
SDF2-202ENST00000585428 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
SDF2-202ENST00000585428 CKS2P33552 79 aa8.66□□□□□ -1.02
SDF2-202ENST00000585428 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
SDF2-202ENST00000585428 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
SDF2-202ENST00000585428 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
SDF2-202ENST00000585428 A0A1B0GW15 77 aa8.64□□□□□ -1.03
SDF2-202ENST00000585428 H3BS24 57 aa8.64□□□□□ -1.03
SDF2-202ENST00000585428 RPL23P62829 140 aaKnown RBP8.64□□□□□ -1.03
SDF2-202ENST00000585428 HBBP68871 147 aa8.64□□□□□ -1.03
SDF2-202ENST00000585428 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
SDF2-202ENST00000585428 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
SDF2-202ENST00000585428 IFITM10A6NMD0 228 aa8.63□□□□□ -1.03
SDF2-202ENST00000585428 PRR4Q16378 134 aa8.63□□□□□ -1.03
SDF2-202ENST00000585428 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
SDF2-202ENST00000585428 LINC00242Q5T6M2 205 aa8.63□□□□□ -1.03
SDF2-202ENST00000585428 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
SDF2-202ENST00000585428 D6R8Y8 96 aa8.62□□□□□ -1.03
SDF2-202ENST00000585428 NDUFC2-KCTD14E9PQ53 114 aa8.62□□□□□ -1.03
SDF2-202ENST00000585428 M0QXV9 152 aa8.62□□□□□ -1.03
SDF2-202ENST00000585428 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
SDF2-202ENST00000585428 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
SDF2-202ENST00000585428 PYGO1Q9Y3Y4 419 aa8.62□□□□□ -1.03
SDF2-202ENST00000585428 TGIF2-C20orf24A0A0A6YYL0 155 aa8.61□□□□□ -1.03
SDF2-202ENST00000585428 NPYP01303 97 aa8.61□□□□□ -1.03
SDF2-202ENST00000585428 UBE2D1P51668 147 aa8.61□□□□□ -1.03
SDF2-202ENST00000585428 UBE2BP63146 152 aa8.61□□□□□ -1.03
SDF2-202ENST00000585428 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
SDF2-202ENST00000585428 C9JQL5 133 aa8.6□□□□□ -1.03
SDF2-202ENST00000585428 ZNF861PO60384 105 aa8.6□□□□□ -1.03
SDF2-202ENST00000585428 PPBPP02775 128 aa8.6□□□□□ -1.03
SDF2-202ENST00000585428 IGLV4-3A0A075B6K6 122 aa8.59□□□□□ -1.03
SDF2-202ENST00000585428 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
SDF2-202ENST00000585428 F8W036 122 aa8.59□□□□□ -1.03
SDF2-202ENST00000585428 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
SDF2-202ENST00000585428 PRSS47A8MTI9 375 aa8.58□□□□□ -1.04
SDF2-202ENST00000585428 IFI27P40305 119 aaPredicted RBP8.58□□□□□ -1.04
SDF2-202ENST00000585428 ADIRFQ15847 76 aa8.58□□□□□ -1.04
SDF2-202ENST00000585428 AKAP14Q86UN6 197 aa8.58□□□□□ -1.04
SDF2-202ENST00000585428 NAT8Q9UHE5 227 aa8.58□□□□□ -1.04
SDF2-202ENST00000585428 S100A8P05109 93 aa8.57□□□□□ -1.04
SDF2-202ENST00000585428 RAB5AP20339 215 aa8.57□□□□□ -1.04
SDF2-202ENST00000585428 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
SDF2-202ENST00000585428 TMEM141Q96I45 108 aa8.57□□□□□ -1.04
SDF2-202ENST00000585428 PACRGQ96M98 296 aaPredicted RBP8.57□□□□□ -1.04
SDF2-202ENST00000585428 TMEM136Q6ZRR5 245 aa8.56□□□□□ -1.04
SDF2-202ENST00000585428 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
SDF2-202ENST00000585428 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
SDF2-202ENST00000585428 ORMDL3Q8N138 153 aa8.55□□□□□ -1.04
SDF2-202ENST00000585428 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
SDF2-202ENST00000585428 NUPR1O60356 82 aa8.54□□□□□ -1.04
SDF2-202ENST00000585428 TSPAN13O95857 204 aa8.54□□□□□ -1.04
SDF2-202ENST00000585428 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
SDF2-202ENST00000585428 PRELID3AQ96N28 172 aa8.54□□□□□ -1.04
SDF2-202ENST00000585428 AMELXQ99217 191 aa8.54□□□□□ -1.04
SDF2-202ENST00000585428 A0A0U1RQV1 116 aa8.53□□□□□ -1.04
SDF2-202ENST00000585428 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
SDF2-202ENST00000585428 ZC2HC1BQ5TFG8 222 aa8.53□□□□□ -1.04
SDF2-202ENST00000585428 Q6ZN92 141 aa8.53□□□□□ -1.04
SDF2-202ENST00000585428 LINC00173Q6ZV60 143 aa8.53□□□□□ -1.04
SDF2-202ENST00000585428 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
SDF2-202ENST00000585428 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
SDF2-202ENST00000585428 A0A087X002 238 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms