RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 FOXI1Q12951 378 aa15.14■□□□□ 0.01
LSM7-202ENST00000585395 BAGE3Q86Y29 109 aa15.14■□□□□ 0.01
LSM7-202ENST00000585395 ATP6V1G1O75348 118 aa15.13■□□□□ 0.01
LSM7-202ENST00000585395 MALP21145 153 aa15.13■□□□□ 0.01
LSM7-202ENST00000585395 COX7A2LO14548 114 aa15.12■□□□□ 0.01
LSM7-202ENST00000585395 IGHV1-58A0A0C4DH39 117 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 hDV102S1A0JD36 115 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 APOMO95445 188 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 SEC11AP67812 179 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 Q5VSD8 79 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 FAM104AQ969W3 186 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 AMELXQ99217 191 aa15.11■□□□□ 0.01
LSM7-202ENST00000585395 FLG2Q5D862 2391 aaPredicted RBP15.1■□□□□ 0.01
LSM7-202ENST00000585395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.1■□□□□ 0.01
LSM7-202ENST00000585395 VPS13BQ7Z7G8 4022 aa15.09■□□□□ 0.01
LSM7-202ENST00000585395 FAT1Q14517 4588 aa15.09■□□□□ 0.01
LSM7-202ENST00000585395 URB1-AS1Q96HZ7 61 aa15.09■□□□□ 0.01
LSM7-202ENST00000585395 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.08■□□□□ 0
LSM7-202ENST00000585395 HSBP1O75506 76 aa15.08■□□□□ 0
LSM7-202ENST00000585395 ATP5LO75964 103 aa15.08■□□□□ 0
LSM7-202ENST00000585395 PRSS1P07477 247 aa15.08■□□□□ 0
LSM7-202ENST00000585395 XGP55808 180 aa15.08■□□□□ 0
LSM7-202ENST00000585395 UBE2D1P51668 147 aa15.06■□□□□ 0
LSM7-202ENST00000585395 HAMPP81172 84 aa15.06■□□□□ 0
LSM7-202ENST00000585395 GVQW2A0A096LPI5 108 aaPredicted RBP15.05■□□□□ -0
LSM7-202ENST00000585395 C15orf56Q8N910 161 aa15.05■□□□□ -0
LSM7-202ENST00000585395 ZNF561-AS1K7EIQ3 104 aa15.04■□□□□ -0
LSM7-202ENST00000585395 PMVKQ15126 192 aa15.04■□□□□ -0
LSM7-202ENST00000585395 LINC00242Q5T6M2 205 aa15.04■□□□□ -0
LSM7-202ENST00000585395 LINC00173Q6ZV60 143 aa15.04■□□□□ -0
LSM7-202ENST00000585395 C5orf38Q86SI9 138 aa15.04■□□□□ -0
LSM7-202ENST00000585395 IGHV3OR16-9A0A0B4J2B5 98 aa15.03■□□□□ -0
LSM7-202ENST00000585395 CNBPP62633 177 aaKnown RBP15.03■□□□□ -0
LSM7-202ENST00000585395 HERVK_113P63121 156 aa15.03■□□□□ -0
LSM7-202ENST00000585395 LINC01620Q4KN68 170 aa15.03■□□□□ -0
LSM7-202ENST00000585395 GEMIN7Q9H840 131 aaKnown RBP15.03■□□□□ -0
LSM7-202ENST00000585395 A0A096LNJ9 63 aa15.02■□□□□ -0
LSM7-202ENST00000585395 SMR3BP02814 79 aaPredicted RBP15.02■□□□□ -0
LSM7-202ENST00000585395 PMCHL1Q16048 86 aa15.02■□□□□ -0
LSM7-202ENST00000585395 HIGD2BQ4VC39 106 aa15.02■□□□□ -0
LSM7-202ENST00000585395 PDZD11Q5EBL8 140 aa15.02■□□□□ -0
LSM7-202ENST00000585395 FAM19A3Q7Z5A8 133 aa15.02■□□□□ -0
LSM7-202ENST00000585395 UBR4Q5T4S7 5183 aa15.01□□□□□ -0.01
LSM7-202ENST00000585395 ZC2HC1BQ5TFG8 222 aa15□□□□□ -0.01
LSM7-202ENST00000585395 LINC01561Q8N1V8 128 aa15□□□□□ -0.01
LSM7-202ENST00000585395 OR10D4PQ8NGN7 298 aa15□□□□□ -0.01
LSM7-202ENST00000585395 CST9LQ9H4G1 147 aa15□□□□□ -0.01
LSM7-202ENST00000585395 PKIGQ9Y2B9 76 aa15□□□□□ -0.01
LSM7-202ENST00000585395 A0A087WZ39 114 aa14.99□□□□□ -0.01
LSM7-202ENST00000585395 NDUFA6P56556 154 aa14.99□□□□□ -0.01
LSM7-202ENST00000585395 FAM30AQ9NZY2 134 aa14.99□□□□□ -0.01
LSM7-202ENST00000585395 SERF1AO75920 110 aa14.98□□□□□ -0.01
LSM7-202ENST00000585395 C9orf163Q8N9P6 203 aa14.98□□□□□ -0.01
LSM7-202ENST00000585395 IGHV3-64A0A075B6Q5 118 aa14.97□□□□□ -0.01
LSM7-202ENST00000585395 FAM229AH3BQW9 127 aa14.97□□□□□ -0.01
LSM7-202ENST00000585395 J3QL48 77 aa14.97□□□□□ -0.01
LSM7-202ENST00000585395 TINCRA0A1B0GVN0 87 aa14.96□□□□□ -0.01
LSM7-202ENST00000585395 F8WDY8 70 aa14.96□□□□□ -0.01
LSM7-202ENST00000585395 SPAG11BQ08648 103 aa14.96□□□□□ -0.01
LSM7-202ENST00000585395 ORAOV1Q8WV07 137 aa14.96□□□□□ -0.01
LSM7-202ENST00000585395 PACRGQ96M98 296 aaPredicted RBP14.96□□□□□ -0.01
LSM7-202ENST00000585395 A0A0J9YXV3 536 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BKO60814 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BJP06899 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BOP23527 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BBP33778 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BDP58876 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BCP62807 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 COX6A2Q02221 97 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST2H2BEQ16778 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BHQ93079 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 IFI27L1Q96BM0 104 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 C2orf48Q96LS8 159 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BNQ99877 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 HIST1H2BMQ99879 126 aa14.95□□□□□ -0.02
LSM7-202ENST00000585395 FAM19A2Q8N3H0 131 aa14.94□□□□□ -0.02
LSM7-202ENST00000585395 LEPROTL1O95214 131 aa14.93□□□□□ -0.02
LSM7-202ENST00000585395 SYCNQ0VAF6 134 aa14.93□□□□□ -0.02
LSM7-202ENST00000585395 LINC00469Q8N7U9 141 aa14.93□□□□□ -0.02
LSM7-202ENST00000585395 CAMK2N2Q96S95 79 aa14.93□□□□□ -0.02
LSM7-202ENST00000585395 HSPB8Q9UJY1 196 aa14.93□□□□□ -0.02
LSM7-202ENST00000585395 IGLV4-69A0A075B6H9 119 aa14.92□□□□□ -0.02
LSM7-202ENST00000585395 H3BRM9 83 aa14.92□□□□□ -0.02
LSM7-202ENST00000585395 CARD19Q96LW7 228 aa14.92□□□□□ -0.02
LSM7-202ENST00000585395 Q6ZSA8 131 aa14.91□□□□□ -0.02
LSM7-202ENST00000585395 TRAV12-1A0A0B4J245 112 aa14.9□□□□□ -0.02
LSM7-202ENST00000585395 PRSS2P07478 247 aa14.9□□□□□ -0.02
LSM7-202ENST00000585395 CDKN2A-AS1Q9UH64 79 aa14.9□□□□□ -0.02
LSM7-202ENST00000585395 SLPIP03973 132 aa14.89□□□□□ -0.03
LSM7-202ENST00000585395 IGLC3P0DOY3 106 aa14.89□□□□□ -0.03
LSM7-202ENST00000585395 LINC00310P59036 64 aa14.89□□□□□ -0.03
LSM7-202ENST00000585395 CHAC1Q9BUX1 264 aa14.89□□□□□ -0.03
LSM7-202ENST00000585395 IGLV5-45A0A087WSX0 123 aa14.88□□□□□ -0.03
LSM7-202ENST00000585395 NDUFA1O15239 70 aa14.88□□□□□ -0.03
LSM7-202ENST00000585395 SCXQ7RTU7 201 aa14.88□□□□□ -0.03
LSM7-202ENST00000585395 LINC00526Q96FQ7 95 aa14.88□□□□□ -0.03
LSM7-202ENST00000585395 CHTOPQ9Y3Y2 248 aaKnown RBP14.88□□□□□ -0.03
LSM7-202ENST00000585395 SDIM1Q6ZPB5 146 aa14.85□□□□□ -0.03
LSM7-202ENST00000585395 LINC00528Q8N1L1 170 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms