RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 F8VRH5 84 aa12.19□□□□□ -0.46
RFFL-211ENST00000584541 SYS1-DBNDD2H3BUS1 97 aa12.19□□□□□ -0.46
RFFL-211ENST00000584541 KRTAP26-1Q6PEX3 210 aa12.19□□□□□ -0.46
RFFL-211ENST00000584541 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
RFFL-211ENST00000584541 KMT2AQ03164 3969 aa12.19□□□□□ -0.46
RFFL-211ENST00000584541 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
RFFL-211ENST00000584541 FOXI1Q12951 378 aa12.18□□□□□ -0.46
RFFL-211ENST00000584541 PET117Q6UWS5 81 aa12.18□□□□□ -0.46
RFFL-211ENST00000584541 COX7A2LO14548 114 aa12.17□□□□□ -0.46
RFFL-211ENST00000584541 IGLC3P0DOY3 106 aa12.17□□□□□ -0.46
RFFL-211ENST00000584541 ODF1Q14990 250 aa12.17□□□□□ -0.46
RFFL-211ENST00000584541 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
RFFL-211ENST00000584541 CHAC1Q9BUX1 264 aa12.17□□□□□ -0.46
RFFL-211ENST00000584541 MRPL35Q9NZE8 188 aaKnown RBP12.17□□□□□ -0.46
RFFL-211ENST00000584541 IGLV4-69A0A075B6H9 119 aa12.16□□□□□ -0.46
RFFL-211ENST00000584541 IGHV3OR16-9A0A0B4J2B5 98 aa12.16□□□□□ -0.46
RFFL-211ENST00000584541 C20orf202A1L168 122 aa12.16□□□□□ -0.46
RFFL-211ENST00000584541 MALP21145 153 aa12.16□□□□□ -0.46
RFFL-211ENST00000584541 COX6A2Q02221 97 aa12.16□□□□□ -0.46
RFFL-211ENST00000584541 LINC00469Q8N7U9 141 aa12.16□□□□□ -0.46
RFFL-211ENST00000584541 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
RFFL-211ENST00000584541 C5orf38Q86SI9 138 aa12.15□□□□□ -0.46
RFFL-211ENST00000584541 H3BRM9 83 aa12.14□□□□□ -0.47
RFFL-211ENST00000584541 RTL8CO15255 209 aa12.14□□□□□ -0.47
RFFL-211ENST00000584541 APOMO95445 188 aa12.14□□□□□ -0.47
RFFL-211ENST00000584541 PLNP26678 52 aa12.14□□□□□ -0.47
RFFL-211ENST00000584541 MAPKAPK5-AS1Q8N8E1 139 aa12.14□□□□□ -0.47
RFFL-211ENST00000584541 HYDINQ4G0P3 5121 aa12.14□□□□□ -0.47
RFFL-211ENST00000584541 A0A087WZ39 114 aa12.13□□□□□ -0.47
RFFL-211ENST00000584541 C11orf86A6NJI1 115 aa12.13□□□□□ -0.47
RFFL-211ENST00000584541 DPM2O94777 84 aa12.13□□□□□ -0.47
RFFL-211ENST00000584541 LINC01545Q5VT33 79 aa12.13□□□□□ -0.47
RFFL-211ENST00000584541 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
RFFL-211ENST00000584541 EPPK1P58107 5090 aaKnown RBP12.12□□□□□ -0.47
RFFL-211ENST00000584541 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
RFFL-211ENST00000584541 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
RFFL-211ENST00000584541 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
RFFL-211ENST00000584541 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
RFFL-211ENST00000584541 OR10D4PQ8NGN7 298 aa12.12□□□□□ -0.47
RFFL-211ENST00000584541 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
RFFL-211ENST00000584541 USP17L23D6RBM5 183 aa12.11□□□□□ -0.47
RFFL-211ENST00000584541 EREGO14944 169 aa12.11□□□□□ -0.47
RFFL-211ENST00000584541 IGKCP01834 107 aa12.11□□□□□ -0.47
RFFL-211ENST00000584541 ZNF22P17026 224 aaPredicted RBP12.11□□□□□ -0.47
RFFL-211ENST00000584541 AKR1D1P51857 326 aa12.11□□□□□ -0.47
RFFL-211ENST00000584541 C14orf177Q52M58 125 aa12.11□□□□□ -0.47
RFFL-211ENST00000584541 LINC00336Q6ZUF6 198 aa12.11□□□□□ -0.47
RFFL-211ENST00000584541 LECT2O14960 151 aa12.1□□□□□ -0.47
RFFL-211ENST00000584541 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
RFFL-211ENST00000584541 A0A087WTM6 91 aa12.08□□□□□ -0.48
RFFL-211ENST00000584541 TNP2Q05952 138 aa12.08□□□□□ -0.48
RFFL-211ENST00000584541 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
RFFL-211ENST00000584541 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
RFFL-211ENST00000584541 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
RFFL-211ENST00000584541 ZNF561-AS1K7EIQ3 104 aa12.06□□□□□ -0.48
RFFL-211ENST00000584541 SPINK8P0C7L1 97 aa12.06□□□□□ -0.48
RFFL-211ENST00000584541 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 SMIM1B2RUZ4 78 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 SCGB1D1O95968 90 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 PRSS2P07478 247 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 HERVK_113P61574 105 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 WFDC2Q14508 124 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
RFFL-211ENST00000584541 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
RFFL-211ENST00000584541 TMEM223A0PJW6 202 aa12.04□□□□□ -0.48
RFFL-211ENST00000584541 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
RFFL-211ENST00000584541 Q8N814 137 aa12.04□□□□□ -0.48
RFFL-211ENST00000584541 TOMM7Q9P0U1 55 aa12.03□□□□□ -0.48
RFFL-211ENST00000584541 C6orf226Q5I0X4 101 aa12.01□□□□□ -0.49
RFFL-211ENST00000584541 Q8IZM0 81 aa12.01□□□□□ -0.49
RFFL-211ENST00000584541 COX7B2Q8TF08 81 aa12.01□□□□□ -0.49
RFFL-211ENST00000584541 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
RFFL-211ENST00000584541 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
RFFL-211ENST00000584541 ATOH7Q8N100 152 aa12□□□□□ -0.49
RFFL-211ENST00000584541 DNAH10Q8IVF4 4471 aa11.99□□□□□ -0.49
RFFL-211ENST00000584541 F8WDY8 70 aa11.99□□□□□ -0.49
RFFL-211ENST00000584541 JOSD1Q15040 202 aaPredicted RBP11.99□□□□□ -0.49
RFFL-211ENST00000584541 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
RFFL-211ENST00000584541 DNAH2Q9P225 4427 aa11.99□□□□□ -0.49
RFFL-211ENST00000584541 FRAS1Q86XX4 4008 aa11.99□□□□□ -0.49
RFFL-211ENST00000584541 CKS1BP61024 79 aa11.98□□□□□ -0.49
RFFL-211ENST00000584541 NTN5Q8WTR8 489 aaPredicted RBP11.98□□□□□ -0.49
RFFL-211ENST00000584541 LINC00526Q96FQ7 95 aa11.98□□□□□ -0.49
RFFL-211ENST00000584541 CAMK2N2Q96S95 79 aa11.98□□□□□ -0.49
RFFL-211ENST00000584541 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.97□□□□□ -0.49
RFFL-211ENST00000584541 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
RFFL-211ENST00000584541 CXCL5P42830 114 aa11.97□□□□□ -0.49
RFFL-211ENST00000584541 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
RFFL-211ENST00000584541 PLEKHB2Q96CS7 222 aa11.97□□□□□ -0.49
RFFL-211ENST00000584541 NDUFA1O15239 70 aa11.96□□□□□ -0.49
RFFL-211ENST00000584541 LEPROTO15243 131 aa11.96□□□□□ -0.49
RFFL-211ENST00000584541 STPG4Q8N801 248 aa11.96□□□□□ -0.49
RFFL-211ENST00000584541 E9PLD3 99 aa11.95□□□□□ -0.5
RFFL-211ENST00000584541 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
RFFL-211ENST00000584541 SYCNQ0VAF6 134 aa11.95□□□□□ -0.5
RFFL-211ENST00000584541 SFTA2Q6UW10 78 aa11.94□□□□□ -0.5
RFFL-211ENST00000584541 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
RFFL-211ENST00000584541 PGPEP1Q9NXJ5 209 aa11.94□□□□□ -0.5
RFFL-211ENST00000584541 DNAH17Q9UFH2 4485 aa11.94□□□□□ -0.5
RFFL-211ENST00000584541 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms