RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 Q6ZSA8 131 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 LINC00173Q6ZV60 143 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 ERASQ7Z444 233 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 LINC00526Q96FQ7 95 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 AMELXQ99217 191 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
ITGB4-210ENST00000584025 LINC00614P0C842 121 aa9.94□□□□□ -0.82
ITGB4-210ENST00000584025 UBE2D1P51668 147 aa9.94□□□□□ -0.82
ITGB4-210ENST00000584025 APOBP04114 4563 aaKnown RBP9.93□□□□□ -0.82
ITGB4-210ENST00000584025 IGHV3OR16-9A0A0B4J2B5 98 aa9.93□□□□□ -0.82
ITGB4-210ENST00000584025 RAB5BP61020 215 aa9.93□□□□□ -0.82
ITGB4-210ENST00000584025 LINC00242Q5T6M2 205 aa9.93□□□□□ -0.82
ITGB4-210ENST00000584025 URB1-AS1Q96HZ7 61 aa9.93□□□□□ -0.82
ITGB4-210ENST00000584025 Q8N1X5 172 aa9.92□□□□□ -0.82
ITGB4-210ENST00000584025 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
ITGB4-210ENST00000584025 SMR3BP02814 79 aaPredicted RBP9.91□□□□□ -0.82
ITGB4-210ENST00000584025 COX6A2Q02221 97 aa9.91□□□□□ -0.82
ITGB4-210ENST00000584025 SDIM1Q6ZPB5 146 aa9.91□□□□□ -0.82
ITGB4-210ENST00000584025 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
ITGB4-210ENST00000584025 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
ITGB4-210ENST00000584025 TRGC2P03986 189 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 SPAG11BQ08648 103 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 SYCNQ0VAF6 134 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 PMCHL1Q16048 86 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 CHAC1Q9BUX1 264 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.82
ITGB4-210ENST00000584025 HSPG2P98160 4391 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 A0A087WZ39 114 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 COLCA2A8K830 154 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 HBDP02042 147 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 SEC11AP67812 179 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 OR10D4PQ8NGN7 298 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 CAMK2N2Q96S95 79 aa9.89□□□□□ -0.83
ITGB4-210ENST00000584025 A0A096LNJ9 63 aa9.88□□□□□ -0.83
ITGB4-210ENST00000584025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.88□□□□□ -0.83
ITGB4-210ENST00000584025 SCO1O75880 301 aa9.88□□□□□ -0.83
ITGB4-210ENST00000584025 GEMIN7Q9H840 131 aaKnown RBP9.88□□□□□ -0.83
ITGB4-210ENST00000584025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
ITGB4-210ENST00000584025 DNAH8Q96JB1 4490 aa9.88□□□□□ -0.83
ITGB4-210ENST00000584025 A0A0J9YXV3 536 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 HERVK_113P63121 156 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 PMVKQ15126 192 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 BAGE3Q86Y29 109 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 CIRBP-AS1Q8TBR5 109 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
ITGB4-210ENST00000584025 DPH3Q96FX2 82 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
ITGB4-210ENST00000584025 PANO1I0J062 215 aa9.86□□□□□ -0.83
ITGB4-210ENST00000584025 NDUFA6P56556 154 aa9.86□□□□□ -0.83
ITGB4-210ENST00000584025 Q6ZRU5 148 aa9.86□□□□□ -0.83
ITGB4-210ENST00000584025 KRTAP4-5Q9BYR2 181 aa9.86□□□□□ -0.83
ITGB4-210ENST00000584025 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
ITGB4-210ENST00000584025 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
ITGB4-210ENST00000584025 IGKV2-24A0A0C4DH68 120 aa9.85□□□□□ -0.83
ITGB4-210ENST00000584025 FAM229AH3BQW9 127 aa9.85□□□□□ -0.83
ITGB4-210ENST00000584025 CHTF8P0CG12 524 aa9.85□□□□□ -0.83
ITGB4-210ENST00000584025 PDZD11Q5EBL8 140 aa9.85□□□□□ -0.83
ITGB4-210ENST00000584025 LINC01561Q8N1V8 128 aa9.85□□□□□ -0.83
ITGB4-210ENST00000584025 ATP5LO75964 103 aa9.84□□□□□ -0.83
ITGB4-210ENST00000584025 Q5VSD8 79 aa9.84□□□□□ -0.83
ITGB4-210ENST00000584025 CDKN2A-AS1Q9UH64 79 aa9.84□□□□□ -0.83
ITGB4-210ENST00000584025 TINCRA0A1B0GVN0 87 aa9.83□□□□□ -0.84
ITGB4-210ENST00000584025 F8WDY8 70 aa9.83□□□□□ -0.84
ITGB4-210ENST00000584025 NDUFA1O15239 70 aa9.83□□□□□ -0.84
ITGB4-210ENST00000584025 LINC00469Q8N7U9 141 aa9.83□□□□□ -0.84
ITGB4-210ENST00000584025 PACRGQ96M98 296 aaPredicted RBP9.83□□□□□ -0.84
ITGB4-210ENST00000584025 TOMM7Q9P0U1 55 aa9.83□□□□□ -0.84
ITGB4-210ENST00000584025 A0A096LNI7 61 aa9.82□□□□□ -0.84
ITGB4-210ENST00000584025 HSBP1O75506 76 aa9.82□□□□□ -0.84
ITGB4-210ENST00000584025 PRSS2P07478 247 aa9.82□□□□□ -0.84
ITGB4-210ENST00000584025 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
ITGB4-210ENST00000584025 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
ITGB4-210ENST00000584025 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
ITGB4-210ENST00000584025 SPACA4Q8TDM5 124 aa9.82□□□□□ -0.84
ITGB4-210ENST00000584025 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
ITGB4-210ENST00000584025 KIAA0087Q14695 138 aa9.81□□□□□ -0.84
ITGB4-210ENST00000584025 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
ITGB4-210ENST00000584025 RNF151Q2KHN1 245 aa9.8□□□□□ -0.84
ITGB4-210ENST00000584025 FAM19A2Q8N3H0 131 aa9.8□□□□□ -0.84
ITGB4-210ENST00000584025 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
ITGB4-210ENST00000584025 A0A087WYN8 130 aa9.79□□□□□ -0.84
ITGB4-210ENST00000584025 SERF1AO75920 110 aa9.79□□□□□ -0.84
ITGB4-210ENST00000584025 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
ITGB4-210ENST00000584025 C10orf25Q5T742 122 aa9.79□□□□□ -0.84
ITGB4-210ENST00000584025 C2orf82Q6UX34 121 aa9.79□□□□□ -0.84
ITGB4-210ENST00000584025 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
ITGB4-210ENST00000584025 IGLV5-45A0A087WSX0 123 aa9.78□□□□□ -0.84
ITGB4-210ENST00000584025 IGLC3P0DOY3 106 aa9.78□□□□□ -0.84
ITGB4-210ENST00000584025 CKS1BP61024 79 aa9.78□□□□□ -0.84
ITGB4-210ENST00000584025 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
ITGB4-210ENST00000584025 C6orf226Q5I0X4 101 aa9.78□□□□□ -0.84
ITGB4-210ENST00000584025 IFI27L1Q96BM0 104 aa9.78□□□□□ -0.84
ITGB4-210ENST00000584025 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.85
ITGB4-210ENST00000584025 H3BRM9 83 aa9.77□□□□□ -0.85
ITGB4-210ENST00000584025 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
ITGB4-210ENST00000584025 SPINK8P0C7L1 97 aa9.77□□□□□ -0.85
ITGB4-210ENST00000584025 PTTG1IPP53801 180 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms