RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 C7orf33Q8WU49 177 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 TMEM101Q96IK0 257 aa3.35□□□□□ -1.87
VAPA-207ENST00000583879 PKHD1L1Q86WI1 4243 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 IGLV10-54A0A075B6I4 117 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 TMSB15BA0A087X1C1 80 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 TRAV8-4A0A0B4J246 113 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 TRBV6-1A0A0K0K1D8 114 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 SH2D1AO60880 128 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 P01737 135 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 REG3AQ06141 175 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 PMAIP1Q13794 54 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 PYY3Q5JQD4 70 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 SUMO4Q6EEV6 95 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
VAPA-207ENST00000583879 CLPSL2Q6UWE3 100 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 GTSF1Q8WW33 167 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 PLEKHB2Q96CS7 222 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 DERL1Q9BUN8 251 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 RNASE7Q9H1E1 156 aaKnown RBP3.34□□□□□ -1.87
VAPA-207ENST00000583879 NAT8Q9UHE5 227 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 VAX2Q9UIW0 290 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 PKIGQ9Y2B9 76 aa3.34□□□□□ -1.87
VAPA-207ENST00000583879 TRBV25-1A0A075B6N4 114 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 C9JAW5 83 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 PEX7O00628 323 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 NDUFC2O95298 119 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 GZMBP10144 247 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 GNG4P50150 75 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 COX6A2Q02221 97 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 FABP9Q0Z7S8 132 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 RIGQ13278 110 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 ZNF56Q15929 161 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 ZNF726P1Q15940 193 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 BATFQ16520 125 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 IQCJQ1A5X6 159 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 SPINK6Q6UWN8 80 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 Q86TA4 180 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 C20orf203Q8NBC4 194 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 S100ZQ8WXG8 99 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 KIR2DL4Q99706 377 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 ZNF471Q9BX82 626 aaPredicted RBP3.33□□□□□ -1.88
VAPA-207ENST00000583879 KIF25-AS1Q9Y6Z4 181 aa3.33□□□□□ -1.88
VAPA-207ENST00000583879 TNXBP22105 4242 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 IGHV1-24A0A0C4DH33 117 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 A0A1B0GUV1 79 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 LTAP01374 205 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 RPS10P46783 165 aaKnown RBP3.32□□□□□ -1.88
VAPA-207ENST00000583879 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
VAPA-207ENST00000583879 UBE2G1P62253 170 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 PRR3P79522 188 aaKnown RBP3.32□□□□□ -1.88
VAPA-207ENST00000583879 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
VAPA-207ENST00000583879 REG3GQ6UW15 175 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 STPG4Q8N801 248 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 OR10AG1Q8NH19 301 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 PRSS3P2Q8NHM4 247 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 FMC1Q96HJ9 113 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 ANAPC13Q9BS18 74 aa3.32□□□□□ -1.88
VAPA-207ENST00000583879 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 IGKV2-24A0A0C4DH68 120 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 MUC21A0A0G2JKD1 596 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 MUC21A0A140T8X8 626 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 J3QR89 54 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 UPK1BO75841 260 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 CXCL1P09341 107 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 IFITM3Q01628 133 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 SPANXN1Q5VSR9 72 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 Q6ZVH6 145 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 TCTE3Q8IZS6 198 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 AQP10Q96PS8 301 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
VAPA-207ENST00000583879 A0A087WZ39 114 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 CTXND1A0A1B0GTU2 59 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 M0QY20 66 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
VAPA-207ENST00000583879 Q6ZVQ6 151 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 GTF2H5Q6ZYL4 71 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 C15orf56Q8N910 161 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 TMEM243Q9BU79 118 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 PAM16Q9Y3D7 125 aa3.3□□□□□ -1.88
VAPA-207ENST00000583879 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.29□□□□□ -1.88
VAPA-207ENST00000583879 H7C1H1 209 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 NTF3P20783 257 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 PFN2P35080 140 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 CTRLP40313 264 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 DEFA3P59666 94 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 HSD52Q0P140 79 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 HIGD2BQ4VC39 106 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 Q5BKY6 102 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 RPL7L1Q6DKI1 246 aaKnown RBP3.29□□□□□ -1.88
VAPA-207ENST00000583879 Q6ZRP5 223 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 PRO1933Q9H354 126 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 LINC00474Q9P2X8 69 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
VAPA-207ENST00000583879 LPAP08519 4548 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 A0A096LNI7 61 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 TRAV26-2A0A0B4J265 109 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 UBE2L6O14933 153 aa3.28□□□□□ -1.88
VAPA-207ENST00000583879 FGF6P10767 208 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms