RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 VAMP3Q15836 100 aa4.3□□□□□ -1.72
PRKCA-205ENST00000583775 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
PRKCA-205ENST00000583775 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.3□□□□□ -1.72
PRKCA-205ENST00000583775 HIST1H4GQ99525 98 aa4.3□□□□□ -1.72
PRKCA-205ENST00000583775 CUBNO60494 3623 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 NOTCH3Q9UM47 2321 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 IGLV5-37A0A075B6J1 123 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 TRGV2A0A075B6R0 118 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 IGHV1-58A0A0C4DH39 117 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 K7EP13 123 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 TIMM17BO60830 172 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 GAGE7O76087 117 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 GAGE12FP0CL80 117 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 GAGE12GP0CL81 117 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 GAGE12IP0CL82 117 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 IGHV4-30-4P0DP06 118 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 LGALS3P17931 250 aaKnown RBP4.29□□□□□ -1.72
PRKCA-205ENST00000583775 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 C12orf74Q32Q52 190 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 AMMECR1LQ6DCA0 310 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 SCGB1D4Q6XE38 83 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 Q6ZUT4 128 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 Q6ZVH6 145 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 GTF2H5Q6ZYL4 71 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 VSIG2Q96IQ7 327 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 TMEM243Q9BU79 118 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 CDC42SE2Q9NRR3 84 aa4.29□□□□□ -1.72
PRKCA-205ENST00000583775 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
PRKCA-205ENST00000583775 TRGV4A0A0C4DH28 118 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 A0A0J9YXY3 114 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
PRKCA-205ENST00000583775 A8MZ25 164 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 K7EP34 96 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 IGHV3-30P01768 117 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 IGHV3-30-3P0DP02 117 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 IGHV3-30-5P0DP03 117 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 EMP1P54849 157 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 HERVK_113P63121 156 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 ZFAND6Q6FIF0 208 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 DEFB104AQ8WTQ1 72 aa4.28□□□□□ -1.72
PRKCA-205ENST00000583775 ATRQ13535 2644 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 TRBV6-8A0A0A6YYG3 113 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 IGLL5B9A064 214 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 H3BUT2 72 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 FABP2P12104 132 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 MIFP14174 115 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 GAGE4Q13068 117 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 GAGE5Q13069 117 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRKCA-205ENST00000583775 LINC00242Q5T6M2 205 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 CEMP1Q6PRD7 247 aaPredicted RBP4.27□□□□□ -1.73
PRKCA-205ENST00000583775 SPANXDQ9BXN6 97 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
PRKCA-205ENST00000583775 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
PRKCA-205ENST00000583775 SPANXCQ9NY87 97 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 PRO0255Q9UI72 69 aa4.27□□□□□ -1.73
PRKCA-205ENST00000583775 TRAV26-1A0A087WT03 109 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 A0A1B0GUV1 79 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 NDUFA1O15239 70 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 C10orf126Q8N4M7 172 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 TMEM101Q96IK0 257 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 LITAFQ99732 161 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 F8P00451 2351 aa4.26□□□□□ -1.73
PRKCA-205ENST00000583775 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.25□□□□□ -1.73
PRKCA-205ENST00000583775 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 F5H768 121 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 IFITM1P13164 125 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
PRKCA-205ENST00000583775 RPL24P83731 157 aaKnown RBP4.25□□□□□ -1.73
PRKCA-205ENST00000583775 EGFEM1PQ0D2K5 195 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 SH2D6Q7Z4S9 175 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 Q8NAQ8 132 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 RAB37Q96AX2 223 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 CDKN2A-AS1Q9UH64 79 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 NDUFA12Q9UI09 145 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
PRKCA-205ENST00000583775 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 LOC100131303A0A0U1RQF7 123 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 SMIM1B2RUZ4 78 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 K7ERJ3 54 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 UBE2L6O14933 153 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 CFC1BP0CG36 223 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 CFC1P0CG37 223 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 HERV-K104P63124 156 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 COX6A2Q02221 97 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 MIAQ16674 131 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 FAM222AQ5U5X8 452 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 ATP6V0E2Q8NHE4 81 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 PRO1854Q9UHT4 67 aa4.24□□□□□ -1.73
PRKCA-205ENST00000583775 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
PRKCA-205ENST00000583775 F8W1H4 67 aa4.23□□□□□ -1.73
PRKCA-205ENST00000583775 H3BNG1 76 aa4.23□□□□□ -1.73
PRKCA-205ENST00000583775 SPART-AS1P0CW21 52 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms