RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TOMM6Q96B49 74 aa16.05■□□□□ 0.16
TSEN54-209ENST00000583454 AP5S1Q9NUS5 200 aa16.05■□□□□ 0.16
TSEN54-209ENST00000583454 IGHV1-58A0A0C4DH39 117 aa16.04■□□□□ 0.16
TSEN54-209ENST00000583454 IFITM10A6NMD0 228 aa16.04■□□□□ 0.16
TSEN54-209ENST00000583454 COX7A2LO14548 114 aa16.03■□□□□ 0.16
TSEN54-209ENST00000583454 C18orf32Q8TCD1 76 aa16.03■□□□□ 0.16
TSEN54-209ENST00000583454 FAT3Q8TDW7 4589 aa16.02■□□□□ 0.16
TSEN54-209ENST00000583454 HIGD2BQ4VC39 106 aa16.02■□□□□ 0.16
TSEN54-209ENST00000583454 FA2HQ7L5A8 372 aa16.02■□□□□ 0.16
TSEN54-209ENST00000583454 LINC00528Q8N1L1 170 aa16.02■□□□□ 0.16
TSEN54-209ENST00000583454 AMELXQ99217 191 aa16.02■□□□□ 0.16
TSEN54-209ENST00000583454 TIMM17AQ99595 171 aa16.01■□□□□ 0.15
TSEN54-209ENST00000583454 PKHD1L1Q86WI1 4243 aa16.01■□□□□ 0.15
TSEN54-209ENST00000583454 IGHV3OR16-9A0A0B4J2B5 98 aa16■□□□□ 0.15
TSEN54-209ENST00000583454 LINC01549A6NIU2 74 aa16■□□□□ 0.15
TSEN54-209ENST00000583454 TEX43Q6ZNM6 134 aa16■□□□□ 0.15
TSEN54-209ENST00000583454 LINC00173Q6ZV60 143 aa16■□□□□ 0.15
TSEN54-209ENST00000583454 VCX2Q9H322 139 aa16■□□□□ 0.15
TSEN54-209ENST00000583454 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.99■□□□□ 0.15
TSEN54-209ENST00000583454 Q6ZN92 141 aa15.99■□□□□ 0.15
TSEN54-209ENST00000583454 SCXQ7RTU7 201 aa15.99■□□□□ 0.15
TSEN54-209ENST00000583454 ERASQ7Z444 233 aa15.99■□□□□ 0.15
TSEN54-209ENST00000583454 C5orf38Q86SI9 138 aa15.99■□□□□ 0.15
TSEN54-209ENST00000583454 URB1-AS1Q96HZ7 61 aa15.99■□□□□ 0.15
TSEN54-209ENST00000583454 MALP21145 153 aa15.98■□□□□ 0.15
TSEN54-209ENST00000583454 ZC2HC1BQ5TFG8 222 aa15.98■□□□□ 0.15
TSEN54-209ENST00000583454 SDIM1Q6ZPB5 146 aa15.98■□□□□ 0.15
TSEN54-209ENST00000583454 PLA2G1BP04054 148 aaKnown RBP15.97■□□□□ 0.15
TSEN54-209ENST00000583454 UBE2D1P51668 147 aa15.97■□□□□ 0.15
TSEN54-209ENST00000583454 KRTAP10-4P60372 401 aaPredicted RBP15.97■□□□□ 0.15
TSEN54-209ENST00000583454 PAPPA-AS1Q5QFB9 102 aa15.97■□□□□ 0.15
TSEN54-209ENST00000583454 LINC00242Q5T6M2 205 aa15.97■□□□□ 0.15
TSEN54-209ENST00000583454 C2orf88Q9BSF0 95 aa15.97■□□□□ 0.15
TSEN54-209ENST00000583454 LINC00614P0C842 121 aa15.96■□□□□ 0.15
TSEN54-209ENST00000583454 SCGB3A1Q96QR1 104 aa15.96■□□□□ 0.15
TSEN54-209ENST00000583454 COX6A2Q02221 97 aa15.94■□□□□ 0.14
TSEN54-209ENST00000583454 FAM19A3Q7Z5A8 133 aa15.94■□□□□ 0.14
TSEN54-209ENST00000583454 LINC00526Q96FQ7 95 aa15.94■□□□□ 0.14
TSEN54-209ENST00000583454 IGHV3-64A0A075B6Q5 118 aa15.93■□□□□ 0.14
TSEN54-209ENST00000583454 KRTAP29-1A8MX34 341 aaPredicted RBP15.93■□□□□ 0.14
TSEN54-209ENST00000583454 ZNF561-AS1K7EIQ3 104 aa15.93■□□□□ 0.14
TSEN54-209ENST00000583454 APOMO95445 188 aa15.93■□□□□ 0.14
TSEN54-209ENST00000583454 RAB5BP61020 215 aa15.93■□□□□ 0.14
TSEN54-209ENST00000583454 CHAC1Q9BUX1 264 aa15.93■□□□□ 0.14
TSEN54-209ENST00000583454 A0A096LNJ9 63 aa15.92■□□□□ 0.14
TSEN54-209ENST00000583454 COLCA2A8K830 154 aa15.92■□□□□ 0.14
TSEN54-209ENST00000583454 HMCN2Q8NDA2 5059 aa15.92■□□□□ 0.14
TSEN54-209ENST00000583454 A0A087WZ39 114 aa15.91■□□□□ 0.14
TSEN54-209ENST00000583454 J3QL48 77 aa15.91■□□□□ 0.14
TSEN54-209ENST00000583454 OR10D4PQ8NGN7 298 aa15.9■□□□□ 0.14
TSEN54-209ENST00000583454 IGLV4-69A0A075B6H9 119 aa15.89■□□□□ 0.13
TSEN54-209ENST00000583454 TRGC2P03986 189 aa15.89■□□□□ 0.13
TSEN54-209ENST00000583454 CIRBP-AS1Q8TBR5 109 aa15.89■□□□□ 0.13
TSEN54-209ENST00000583454 C2orf48Q96LS8 159 aa15.89■□□□□ 0.13
TSEN54-209ENST00000583454 SYCNQ0VAF6 134 aa15.88■□□□□ 0.13
TSEN54-209ENST00000583454 CIRBPQ14011 172 aaKnown RBP15.87■□□□□ 0.13
TSEN54-209ENST00000583454 LINC01561Q8N1V8 128 aa15.87■□□□□ 0.13
TSEN54-209ENST00000583454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.87■□□□□ 0.13
TSEN54-209ENST00000583454 PANO1I0J062 215 aa15.86■□□□□ 0.13
TSEN54-209ENST00000583454 HBDP02042 147 aa15.86■□□□□ 0.13
TSEN54-209ENST00000583454 SEC11AP67812 179 aa15.86■□□□□ 0.13
TSEN54-209ENST00000583454 SPAG11BQ08648 103 aa15.86■□□□□ 0.13
TSEN54-209ENST00000583454 ORAOV1Q8WV07 137 aa15.86■□□□□ 0.13
TSEN54-209ENST00000583454 CARD19Q96LW7 228 aa15.86■□□□□ 0.13
TSEN54-209ENST00000583454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.85■□□□□ 0.13
TSEN54-209ENST00000583454 PDZD11Q5EBL8 140 aa15.85■□□□□ 0.13
TSEN54-209ENST00000583454 CHCHD1Q96BP2 118 aaKnown RBP15.85■□□□□ 0.13
TSEN54-209ENST00000583454 CST9LQ9H4G1 147 aa15.85■□□□□ 0.13
TSEN54-209ENST00000583454 HERVK_113P63121 156 aa15.84■□□□□ 0.13
TSEN54-209ENST00000583454 PMCHL1Q16048 86 aa15.84■□□□□ 0.13
TSEN54-209ENST00000583454 A0A0J9YXV3 536 aa15.83■□□□□ 0.12
TSEN54-209ENST00000583454 SCO1O75880 301 aa15.83■□□□□ 0.12
TSEN54-209ENST00000583454 PMVKQ15126 192 aa15.83■□□□□ 0.12
TSEN54-209ENST00000583454 F8WDY8 70 aa15.82■□□□□ 0.12
TSEN54-209ENST00000583454 Q6ZRU5 148 aa15.82■□□□□ 0.12
TSEN54-209ENST00000583454 CAMK2N2Q96S95 79 aa15.82■□□□□ 0.12
TSEN54-209ENST00000583454 KIAA0087Q14695 138 aa15.81■□□□□ 0.12
TSEN54-209ENST00000583454 TINCRA0A1B0GVN0 87 aa15.8■□□□□ 0.12
TSEN54-209ENST00000583454 CHTF8P0CG12 524 aa15.8■□□□□ 0.12
TSEN54-209ENST00000583454 GEMIN7Q9H840 131 aaKnown RBP15.8■□□□□ 0.12
TSEN54-209ENST00000583454 CDKN2A-AS1Q9UH64 79 aa15.8■□□□□ 0.12
TSEN54-209ENST00000583454 BAGE3Q86Y29 109 aa15.79■□□□□ 0.12
TSEN54-209ENST00000583454 SPACA4Q8TDM5 124 aa15.79■□□□□ 0.12
TSEN54-209ENST00000583454 PKIGQ9Y2B9 76 aa15.79■□□□□ 0.12
TSEN54-209ENST00000583454 ATP5LO75964 103 aa15.78■□□□□ 0.12
TSEN54-209ENST00000583454 RNF151Q2KHN1 245 aa15.78■□□□□ 0.12
TSEN54-209ENST00000583454 IGLV5-45A0A087WSX0 123 aa15.77■□□□□ 0.12
TSEN54-209ENST00000583454 MRPL35Q9NZE8 188 aaKnown RBP15.77■□□□□ 0.12
TSEN54-209ENST00000583454 A0A096LNI7 61 aa15.75■□□□□ 0.11
TSEN54-209ENST00000583454 NDUFA1O15239 70 aa15.75■□□□□ 0.11
TSEN54-209ENST00000583454 C10orf25Q5T742 122 aa15.74■□□□□ 0.11
TSEN54-209ENST00000583454 LINC00469Q8N7U9 141 aa15.74■□□□□ 0.11
TSEN54-209ENST00000583454 A0A087WYN8 130 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 IGKV2-24A0A0C4DH68 120 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 LOC107984640A0A0U1RRK4 108 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 LINC00310P59036 64 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 UNQ6190/PRO20217Q6UXQ8 127 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 DPH3Q96FX2 82 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 PLAC8Q9NZF1 115 aa15.73■□□□□ 0.11
TSEN54-209ENST00000583454 HSBP1O75506 76 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms