RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SCO1O75880 301 aa7.7□□□□□ -1.18
TOP3A-215ENST00000583328 FGF6P10767 208 aa7.7□□□□□ -1.18
TOP3A-215ENST00000583328 RNASEKQ6P5S7 137 aaKnown RBP7.7□□□□□ -1.18
TOP3A-215ENST00000583328 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
TOP3A-215ENST00000583328 MRPL52Q86TS9 123 aaKnown RBP7.7□□□□□ -1.18
TOP3A-215ENST00000583328 C20orf203Q8NBC4 194 aa7.7□□□□□ -1.18
TOP3A-215ENST00000583328 IGLV4-60A0A075B6I1 120 aa7.69□□□□□ -1.18
TOP3A-215ENST00000583328 IGKV2-24A0A0C4DH68 120 aa7.69□□□□□ -1.18
TOP3A-215ENST00000583328 COLCA2A8K830 154 aa7.69□□□□□ -1.18
TOP3A-215ENST00000583328 IFI27P40305 119 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-215ENST00000583328 STPG4Q8N801 248 aa7.69□□□□□ -1.18
TOP3A-215ENST00000583328 TMEM101Q96IK0 257 aa7.69□□□□□ -1.18
TOP3A-215ENST00000583328 ORMDL2Q53FV1 153 aa7.68□□□□□ -1.18
TOP3A-215ENST00000583328 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
TOP3A-215ENST00000583328 PRSS3P2Q8NHM4 247 aa7.68□□□□□ -1.18
TOP3A-215ENST00000583328 TIMM21Q9BVV7 248 aa7.68□□□□□ -1.18
TOP3A-215ENST00000583328 OR5A1Q8NGJ0 315 aa7.67□□□□□ -1.18
TOP3A-215ENST00000583328 C18orf32Q8TCD1 76 aa7.67□□□□□ -1.18
TOP3A-215ENST00000583328 UBE2D4Q9Y2X8 147 aa7.67□□□□□ -1.18
TOP3A-215ENST00000583328 CSDC2Q9Y534 153 aaKnown RBP7.67□□□□□ -1.18
TOP3A-215ENST00000583328 LINC01546A6NGU7 62 aa7.66□□□□□ -1.18
TOP3A-215ENST00000583328 G0S2P27469 103 aa7.66□□□□□ -1.18
TOP3A-215ENST00000583328 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
TOP3A-215ENST00000583328 FA2HQ7L5A8 372 aa7.66□□□□□ -1.18
TOP3A-215ENST00000583328 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
TOP3A-215ENST00000583328 TRGC2P03986 189 aa7.65□□□□□ -1.18
TOP3A-215ENST00000583328 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.18
TOP3A-215ENST00000583328 C2orf66Q6UXQ4 117 aa7.65□□□□□ -1.18
TOP3A-215ENST00000583328 CDC42SE2Q9NRR3 84 aa7.65□□□□□ -1.18
TOP3A-215ENST00000583328 CYSLTR1Q9Y271 337 aa7.65□□□□□ -1.18
TOP3A-215ENST00000583328 GAGE12HA6NDE8 117 aa7.64□□□□□ -1.19
TOP3A-215ENST00000583328 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
TOP3A-215ENST00000583328 ZNF664Q8N3J9 261 aa7.64□□□□□ -1.19
TOP3A-215ENST00000583328 C15orf56Q8N910 161 aa7.64□□□□□ -1.19
TOP3A-215ENST00000583328 PYGO1Q9Y3Y4 419 aa7.64□□□□□ -1.19
TOP3A-215ENST00000583328 LINC01549A6NIU2 74 aa7.63□□□□□ -1.19
TOP3A-215ENST00000583328 RAB5BP61020 215 aa7.63□□□□□ -1.19
TOP3A-215ENST00000583328 MRPS36P82909 103 aaKnown RBP7.63□□□□□ -1.19
TOP3A-215ENST00000583328 Q6ZRP5 223 aa7.63□□□□□ -1.19
TOP3A-215ENST00000583328 Q6ZUT4 128 aa7.63□□□□□ -1.19
TOP3A-215ENST00000583328 LPAP08519 4548 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 A0A096LNI7 61 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 LINC00614P0C842 121 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 URB1-AS1Q96HZ7 61 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 KRTAP9-2Q9BYQ4 174 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 LINC00474Q9P2X8 69 aa7.62□□□□□ -1.19
TOP3A-215ENST00000583328 NPSP0C0P6 89 aa7.61□□□□□ -1.19
TOP3A-215ENST00000583328 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
TOP3A-215ENST00000583328 TOMM6Q96B49 74 aa7.61□□□□□ -1.19
TOP3A-215ENST00000583328 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 CCL25O15444 150 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 SS18Q15532 418 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 RNASE13Q5GAN3 156 aaKnown RBP7.6□□□□□ -1.19
TOP3A-215ENST00000583328 BAGE3Q86Y29 109 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 CHCHD1Q96BP2 118 aaKnown RBP7.6□□□□□ -1.19
TOP3A-215ENST00000583328 TMEM141Q96I45 108 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
TOP3A-215ENST00000583328 HBDP02042 147 aa7.59□□□□□ -1.19
TOP3A-215ENST00000583328 PAPPA-AS1Q5QFB9 102 aa7.59□□□□□ -1.19
TOP3A-215ENST00000583328 Q6ZN92 141 aa7.59□□□□□ -1.19
TOP3A-215ENST00000583328 ERASQ7Z444 233 aa7.59□□□□□ -1.19
TOP3A-215ENST00000583328 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-215ENST00000583328 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-215ENST00000583328 PKIGQ9Y2B9 76 aa7.59□□□□□ -1.19
TOP3A-215ENST00000583328 A0A096LNJ9 63 aa7.58□□□□□ -1.2
TOP3A-215ENST00000583328 GVQW2A0A096LPI5 108 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-215ENST00000583328 C1orf196B1AJZ1 125 aa7.58□□□□□ -1.2
TOP3A-215ENST00000583328 TEX43Q6ZNM6 134 aa7.58□□□□□ -1.2
TOP3A-215ENST00000583328 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
TOP3A-215ENST00000583328 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
TOP3A-215ENST00000583328 IFITM10A6NMD0 228 aa7.57□□□□□ -1.2
TOP3A-215ENST00000583328 AMELXQ99217 191 aa7.57□□□□□ -1.2
TOP3A-215ENST00000583328 C2orf88Q9BSF0 95 aa7.57□□□□□ -1.2
TOP3A-215ENST00000583328 VCX2Q9H322 139 aa7.57□□□□□ -1.2
TOP3A-215ENST00000583328 A0A0U1RQV1 116 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HSBP1O75506 76 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 XCL1P47992 114 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 FOXI1Q12951 378 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 PMCHL1Q16048 86 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
TOP3A-215ENST00000583328 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 LINC00173Q6ZV60 143 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
TOP3A-215ENST00000583328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.55□□□□□ -1.2
TOP3A-215ENST00000583328 SERF1AO75920 110 aa7.55□□□□□ -1.2
TOP3A-215ENST00000583328 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
TOP3A-215ENST00000583328 CARD19Q96LW7 228 aa7.55□□□□□ -1.2
TOP3A-215ENST00000583328 PSORS1C2Q9UIG4 136 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms