RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 NAT8BQ9UHF3 227 aa9□□□□□ -0.97
SCN4A-202ENST00000581514 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
SCN4A-202ENST00000581514 LINC00862A6NCI5 91 aa8.99□□□□□ -0.97
SCN4A-202ENST00000581514 H0Y9J4 135 aa8.99□□□□□ -0.97
SCN4A-202ENST00000581514 TCAPO15273 167 aa8.99□□□□□ -0.97
SCN4A-202ENST00000581514 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
SCN4A-202ENST00000581514 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
SCN4A-202ENST00000581514 C10orf25Q5T742 122 aa8.99□□□□□ -0.97
SCN4A-202ENST00000581514 CKS2P33552 79 aa8.98□□□□□ -0.97
SCN4A-202ENST00000581514 FAM74A3Q4VXF1 159 aa8.98□□□□□ -0.97
SCN4A-202ENST00000581514 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
SCN4A-202ENST00000581514 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
SCN4A-202ENST00000581514 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
SCN4A-202ENST00000581514 TNFRSF6BO95407 300 aa8.97□□□□□ -0.97
SCN4A-202ENST00000581514 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
SCN4A-202ENST00000581514 TMEM241Q24JQ0 296 aa8.97□□□□□ -0.97
SCN4A-202ENST00000581514 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
SCN4A-202ENST00000581514 AKAP14Q86UN6 197 aa8.97□□□□□ -0.97
SCN4A-202ENST00000581514 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
SCN4A-202ENST00000581514 IGLV1-50A0A075B6I6 118 aa8.96□□□□□ -0.98
SCN4A-202ENST00000581514 SMIM27A0A1W2PRY6 76 aa8.96□□□□□ -0.98
SCN4A-202ENST00000581514 IFITM10A6NMD0 228 aa8.96□□□□□ -0.98
SCN4A-202ENST00000581514 RPL23P62829 140 aaKnown RBP8.96□□□□□ -0.98
SCN4A-202ENST00000581514 HBBP68871 147 aa8.96□□□□□ -0.98
SCN4A-202ENST00000581514 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.98
SCN4A-202ENST00000581514 A0A1B0GW15 77 aa8.95□□□□□ -0.98
SCN4A-202ENST00000581514 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
SCN4A-202ENST00000581514 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
SCN4A-202ENST00000581514 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
SCN4A-202ENST00000581514 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
SCN4A-202ENST00000581514 D6R8Y8 96 aa8.94□□□□□ -0.98
SCN4A-202ENST00000581514 ADIRFQ15847 76 aa8.94□□□□□ -0.98
SCN4A-202ENST00000581514 TGIF2-C20orf24A0A0A6YYL0 155 aa8.93□□□□□ -0.98
SCN4A-202ENST00000581514 M0QXV9 152 aa8.93□□□□□ -0.98
SCN4A-202ENST00000581514 NPYP01303 97 aa8.93□□□□□ -0.98
SCN4A-202ENST00000581514 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
SCN4A-202ENST00000581514 UBE2BP63146 152 aa8.92□□□□□ -0.98
SCN4A-202ENST00000581514 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
SCN4A-202ENST00000581514 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
SCN4A-202ENST00000581514 F8W036 122 aa8.91□□□□□ -0.98
SCN4A-202ENST00000581514 UBE2D1P51668 147 aa8.91□□□□□ -0.98
SCN4A-202ENST00000581514 MRPL54Q6P161 138 aaKnown RBP8.91□□□□□ -0.98
SCN4A-202ENST00000581514 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 C9JQL5 133 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 PPBPP02775 128 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 S100A8P05109 93 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 IFI27P40305 119 aaPredicted RBP8.9□□□□□ -0.98
SCN4A-202ENST00000581514 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
SCN4A-202ENST00000581514 hCG_2014768A0A024R1R8 64 aa8.89□□□□□ -0.99
SCN4A-202ENST00000581514 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
SCN4A-202ENST00000581514 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
SCN4A-202ENST00000581514 PRR4Q16378 134 aa8.89□□□□□ -0.99
SCN4A-202ENST00000581514 C9orf129Q5T035 196 aaKnown RBP8.89□□□□□ -0.99
SCN4A-202ENST00000581514 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
SCN4A-202ENST00000581514 RAB5AP20339 215 aa8.88□□□□□ -0.99
SCN4A-202ENST00000581514 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
SCN4A-202ENST00000581514 ORMDL3Q8N138 153 aa8.87□□□□□ -0.99
SCN4A-202ENST00000581514 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
SCN4A-202ENST00000581514 MUC2Q02817 5179 aa8.87□□□□□ -0.99
SCN4A-202ENST00000581514 SRSF3P84103 164 aaKnown RBP8.86□□□□□ -0.99
SCN4A-202ENST00000581514 LINC01561Q8N1V8 128 aa8.86□□□□□ -0.99
SCN4A-202ENST00000581514 PRELID3AQ96N28 172 aa8.86□□□□□ -0.99
SCN4A-202ENST00000581514 CARHSP1Q9Y2V2 147 aaKnown RBP8.86□□□□□ -0.99
SCN4A-202ENST00000581514 TEX43Q6ZNM6 134 aa8.85□□□□□ -0.99
SCN4A-202ENST00000581514 TMEM136Q6ZRR5 245 aa8.85□□□□□ -0.99
SCN4A-202ENST00000581514 ZNF861PO60384 105 aa8.84□□□□□ -0.99
SCN4A-202ENST00000581514 PEA15Q15121 130 aa8.84□□□□□ -0.99
SCN4A-202ENST00000581514 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
SCN4A-202ENST00000581514 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
SCN4A-202ENST00000581514 C2orf88Q9BSF0 95 aa8.83□□□□□ -1
SCN4A-202ENST00000581514 LOC389332A0A1B0GUA5 103 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 PRSS47A8MTI9 375 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 NUPR1O60356 82 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 PRSS2P07478 247 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 Q6ZN92 141 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 C22orf24Q9Y442 160 aa8.82□□□□□ -1
SCN4A-202ENST00000581514 CKS1BP61024 79 aa8.81□□□□□ -1
SCN4A-202ENST00000581514 AMELXQ99217 191 aa8.81□□□□□ -1
SCN4A-202ENST00000581514 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
SCN4A-202ENST00000581514 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
SCN4A-202ENST00000581514 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
SCN4A-202ENST00000581514 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
SCN4A-202ENST00000581514 C2orf66Q6UXQ4 117 aa8.8□□□□□ -1
SCN4A-202ENST00000581514 Q8IZM0 81 aa8.8□□□□□ -1
SCN4A-202ENST00000581514 VCX2Q9H322 139 aa8.8□□□□□ -1
SCN4A-202ENST00000581514 XAGE1AQ9HD64 81 aa8.8□□□□□ -1
SCN4A-202ENST00000581514 LAMTOR2Q9Y2Q5 125 aa8.8□□□□□ -1
SCN4A-202ENST00000581514 TSPAN13O95857 204 aa8.79□□□□□ -1
SCN4A-202ENST00000581514 Q8N8P6 123 aa8.79□□□□□ -1
SCN4A-202ENST00000581514 ALKBH7Q9BT30 221 aaPredicted RBP8.79□□□□□ -1
SCN4A-202ENST00000581514 CTDSP1Q9GZU7 261 aa8.79□□□□□ -1
SCN4A-202ENST00000581514 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
SCN4A-202ENST00000581514 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
SCN4A-202ENST00000581514 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
SCN4A-202ENST00000581514 NPSP0C0P6 89 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms