RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 LINC00336Q6ZUF6 198 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 FAM19A2Q8N3H0 131 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 Q9HAA7 133 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 IGKV2D-24A0A075B6R9 120 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 TRAV12-1A0A0B4J245 112 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 RTL8CO15255 209 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 NDUFA6P56556 154 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 CD164L2Q6UWJ8 174 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
CCDC47-203ENST00000580986 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
CCDC47-203ENST00000580986 CST9LQ9H4G1 147 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 RYR2Q92736 4967 aa6.92□□□□□ -1.3
CCDC47-203ENST00000580986 S100A6P06703 90 aa6.91□□□□□ -1.3
CCDC47-203ENST00000580986 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
CCDC47-203ENST00000580986 TRAV13-1A0A0B4J241 112 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 PSCAO43653 123 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 HERVK_113P63121 156 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 FOXI1Q12951 378 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 LINC00242Q5T6M2 205 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 LINC01561Q8N1V8 128 aa6.9□□□□□ -1.3
CCDC47-203ENST00000580986 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
CCDC47-203ENST00000580986 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
CCDC47-203ENST00000580986 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
CCDC47-203ENST00000580986 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
CCDC47-203ENST00000580986 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
CCDC47-203ENST00000580986 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
CCDC47-203ENST00000580986 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 PRSS1P07477 247 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 XCL1P47992 114 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 MAP1LC3CQ9BXW4 147 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
CCDC47-203ENST00000580986 A0A087WTM6 91 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 A0A087WZ39 114 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 F8VRH5 84 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 COX7A2LO14548 114 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 RYR3Q15413 4870 aa6.87□□□□□ -1.31
CCDC47-203ENST00000580986 IGLV4-69A0A075B6H9 119 aa6.86□□□□□ -1.31
CCDC47-203ENST00000580986 APOMO95445 188 aa6.86□□□□□ -1.31
CCDC47-203ENST00000580986 FABP4P15090 132 aa6.86□□□□□ -1.31
CCDC47-203ENST00000580986 S100A2P29034 98 aa6.86□□□□□ -1.31
CCDC47-203ENST00000580986 ODF1Q14990 250 aa6.86□□□□□ -1.31
CCDC47-203ENST00000580986 ZC2HC1BQ5TFG8 222 aa6.86□□□□□ -1.31
CCDC47-203ENST00000580986 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
CCDC47-203ENST00000580986 GVQW2A0A096LPI5 108 aaPredicted RBP6.85□□□□□ -1.31
CCDC47-203ENST00000580986 IGHV1-58A0A0C4DH39 117 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 AKR1D1P51857 326 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 OR10D4PQ8NGN7 298 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 KRTAP4-11Q9BYQ6 195 aa6.85□□□□□ -1.31
CCDC47-203ENST00000580986 CHTOPQ9Y3Y2 248 aaKnown RBP6.85□□□□□ -1.31
CCDC47-203ENST00000580986 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
CCDC47-203ENST00000580986 PLNP26678 52 aa6.84□□□□□ -1.31
CCDC47-203ENST00000580986 SNRPEP62304 92 aaKnown RBP6.84□□□□□ -1.31
CCDC47-203ENST00000580986 COX6A2Q02221 97 aa6.84□□□□□ -1.31
CCDC47-203ENST00000580986 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
CCDC47-203ENST00000580986 C15orf56Q8N910 161 aa6.84□□□□□ -1.31
CCDC47-203ENST00000580986 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
CCDC47-203ENST00000580986 CHAC1Q9BUX1 264 aa6.84□□□□□ -1.31
CCDC47-203ENST00000580986 IGHV3-64A0A075B6Q5 118 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 F8WDY8 70 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 H3BRM9 83 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 MALP21145 153 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 LINC01545Q5VT33 79 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 Q8N814 137 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 MRPL35Q9NZE8 188 aaKnown RBP6.83□□□□□ -1.32
CCDC47-203ENST00000580986 CDKN2A-AS1Q9UH64 79 aa6.83□□□□□ -1.32
CCDC47-203ENST00000580986 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
CCDC47-203ENST00000580986 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
CCDC47-203ENST00000580986 DPM2O94777 84 aa6.82□□□□□ -1.32
CCDC47-203ENST00000580986 ZNF22P17026 224 aaPredicted RBP6.82□□□□□ -1.32
CCDC47-203ENST00000580986 WFDC2Q14508 124 aa6.82□□□□□ -1.32
CCDC47-203ENST00000580986 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
CCDC47-203ENST00000580986 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
CCDC47-203ENST00000580986 C20orf202A1L168 122 aa6.81□□□□□ -1.32
CCDC47-203ENST00000580986 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
CCDC47-203ENST00000580986 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
CCDC47-203ENST00000580986 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
CCDC47-203ENST00000580986 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
CCDC47-203ENST00000580986 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
CCDC47-203ENST00000580986 IGKCP01834 107 aa6.8□□□□□ -1.32
CCDC47-203ENST00000580986 Q8IZM0 81 aa6.8□□□□□ -1.32
CCDC47-203ENST00000580986 PKD1P98161 4303 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms