RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 LRCOL1A6NCL2 159 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 JMJD7-PLA2G4BH0Y9G9 81 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 CCL3L1P16619 93 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 FXYD6P3P58550 94 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 WFDC9Q8NEX5 89 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 LINC00208Q96KT6 92 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 SCN3AQ9NY46 2000 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 DLG5Q8TDM6 1919 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 PKD1L3Q7Z443 1732 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 LRP4O75096 1905 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 GREB1Q4ZG55 1949 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 IGKV3-7A0A075B6H7 116 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 H0Y9P7 68 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 M0R135 149 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 IGKV1-17P01599 117 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 Q6ZTI0 123 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 C9orf163Q8N9P6 203 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 LRRC37A3O60309 1634 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 ZNF407Q9C0G0 2248 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 PLXNB1O43157 2135 aa2.41□□□□□ -2.02
SMG8-205ENST00000580798 LTBP2Q14767 1821 aa2.4□□□□□ -2.02
SMG8-205ENST00000580798 ARFGEF1Q9Y6D6 1849 aa2.4□□□□□ -2.02
SMG8-205ENST00000580798 TDRD6O60522 2096 aaKnown RBP2.4□□□□□ -2.02
SMG8-205ENST00000580798 LRP6O75581 1613 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 PHRF1Q9P1Y6 1649 aaKnown RBP2.4□□□□□ -2.03
SMG8-205ENST00000580798 TRAV21A0A0B4J279 112 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 CTSGP08311 255 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 CCL18P55774 89 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 LY6EQ16553 131 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 C10orf113Q5VZT2 155 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 WFDC10AQ9H1F0 79 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 TULP4Q9NRJ4 1543 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 MUC22E2RYF6 1773 aaPredicted RBP2.4□□□□□ -2.03
SMG8-205ENST00000580798 KIAA1549LQ6ZVL6 1849 aa2.4□□□□□ -2.03
SMG8-205ENST00000580798 NHSL1Q5SYE7 1610 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 PTPRSQ13332 1948 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 GCC2Q8IWJ2 1684 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 TRBV6-1A0A0K0K1D8 114 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 PDE6GP18545 87 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 COX17Q14061 63 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 TMEM14CQ9P0S9 112 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 KLK9Q9UKQ9 250 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 TIMM8BQ9Y5J9 83 aaPredicted RBP2.39□□□□□ -2.03
SMG8-205ENST00000580798 WDR90Q96KV7 1748 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 FMN2Q9NZ56 1722 aa2.39□□□□□ -2.03
SMG8-205ENST00000580798 DOCK11Q5JSL3 2073 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 K7EMI3 77 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 SPINK4O60575 86 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 RNASE3P12724 160 aaKnown RBP2.38□□□□□ -2.03
SMG8-205ENST00000580798 CPAMD8Q8IZJ3 1885 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 OBSCN-AS1Q96MR7 158 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 GAFA1Q96PS6 74 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 TTTY12Q9BZ98 90 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 MYO16Q9Y6X6 1858 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 SVILO95425 2214 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 COL11A1P12107 1806 aaPredicted RBP2.38□□□□□ -2.03
SMG8-205ENST00000580798 SIP14410 1827 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 LAMA4Q16363 1823 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 ZNF236Q9UL36 1845 aa2.38□□□□□ -2.03
SMG8-205ENST00000580798 TRBV6-4A0A1B0GX49 114 aa2.37□□□□□ -2.03
SMG8-205ENST00000580798 ZNF861PO60384 105 aa2.37□□□□□ -2.03
SMG8-205ENST00000580798 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
SMG8-205ENST00000580798 MUC4Q99102 2169 aa2.37□□□□□ -2.03
SMG8-205ENST00000580798 PCNX2A6NKB5 2137 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 KIF21BO75037 1637 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 TRAV40A0A0B4J280 105 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 LINC01546A6NGU7 62 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 ZNF137PP52743 207 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 DEFB112Q30KQ8 113 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 R4GN34 69 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 C5P01031 1676 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 RREB1Q92766 1687 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 GBF1Q92538 1859 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 NACAE9PAV3 2078 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 RICTORQ6R327 1708 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 MED13Q9UHV7 2174 aa2.36□□□□□ -2.03
SMG8-205ENST00000580798 TUBGCP6Q96RT7 1819 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 NRXN3Q9Y4C0 1643 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 IQGAP1P46940 1657 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 SHPRHQ149N8 1683 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 ADAMTS7Q9UKP4 1686 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 I3L3M4 83 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 M0R1W7 72 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 IL9P15248 144 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 TMEM167BQ9NRX6 74 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 KIAA1549Q9HCM3 1950 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 SAMD9LQ8IVG5 1584 aa2.35□□□□□ -2.03
SMG8-205ENST00000580798 QSER1Q2KHR3 1735 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 COL14A1Q05707 1796 aaKnown RBP2.34□□□□□ -2.03
SMG8-205ENST00000580798 DOCK9Q9BZ29 2069 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 IGKV2-40A0A087WW87 121 aaPredicted RBP2.34□□□□□ -2.03
SMG8-205ENST00000580798 IGKV3OR2-268A0A0C4DH90 116 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 LCE6AA0A183 80 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms