RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SUMO2P61956 95 aaKnown RBP11.23□□□□□ -0.61
NDEL1-209ENST00000580738 C9orf129Q5T035 196 aaKnown RBP11.23□□□□□ -0.61
NDEL1-209ENST00000580738 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
NDEL1-209ENST00000580738 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
NDEL1-209ENST00000580738 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
NDEL1-209ENST00000580738 KIAA0087Q14695 138 aa11.21□□□□□ -0.61
NDEL1-209ENST00000580738 CT83Q5H943 113 aa11.21□□□□□ -0.61
NDEL1-209ENST00000580738 RETNLBQ9BQ08 111 aa11.21□□□□□ -0.61
NDEL1-209ENST00000580738 MUC17Q685J3 4493 aa11.21□□□□□ -0.62
NDEL1-209ENST00000580738 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
NDEL1-209ENST00000580738 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
NDEL1-209ENST00000580738 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
NDEL1-209ENST00000580738 NDUFC2-KCTD14E9PQ53 114 aa11.18□□□□□ -0.62
NDEL1-209ENST00000580738 TAGLN2P37802 199 aaKnown RBP11.18□□□□□ -0.62
NDEL1-209ENST00000580738 PPP1R17O96001 155 aa11.17□□□□□ -0.62
NDEL1-209ENST00000580738 CTDSP1Q9GZU7 261 aa11.17□□□□□ -0.62
NDEL1-209ENST00000580738 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
NDEL1-209ENST00000580738 IFITM10A6NMD0 228 aa11.16□□□□□ -0.62
NDEL1-209ENST00000580738 CRYGAP11844 174 aa11.16□□□□□ -0.62
NDEL1-209ENST00000580738 RGS21Q2M5E4 152 aa11.16□□□□□ -0.62
NDEL1-209ENST00000580738 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
NDEL1-209ENST00000580738 ANAPC11Q9NYG5 84 aa11.15□□□□□ -0.62
NDEL1-209ENST00000580738 PPP1R2P9O14990 202 aa11.14□□□□□ -0.63
NDEL1-209ENST00000580738 NUPR1O60356 82 aa11.14□□□□□ -0.63
NDEL1-209ENST00000580738 SPANXA1Q9NS26 97 aa11.14□□□□□ -0.63
NDEL1-209ENST00000580738 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
NDEL1-209ENST00000580738 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
NDEL1-209ENST00000580738 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
NDEL1-209ENST00000580738 HBBP68871 147 aa11.13□□□□□ -0.63
NDEL1-209ENST00000580738 MRPS36P82909 103 aaKnown RBP11.13□□□□□ -0.63
NDEL1-209ENST00000580738 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
NDEL1-209ENST00000580738 CEBPGP53567 150 aa11.12□□□□□ -0.63
NDEL1-209ENST00000580738 TPRXLQ17RH7 258 aa11.12□□□□□ -0.63
NDEL1-209ENST00000580738 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
NDEL1-209ENST00000580738 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-209ENST00000580738 RIGQ13278 110 aa11.11□□□□□ -0.63
NDEL1-209ENST00000580738 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
NDEL1-209ENST00000580738 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
NDEL1-209ENST00000580738 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
NDEL1-209ENST00000580738 LINC00242Q5T6M2 205 aa11.1□□□□□ -0.63
NDEL1-209ENST00000580738 LINC01551Q86U37 167 aa11.1□□□□□ -0.63
NDEL1-209ENST00000580738 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-209ENST00000580738 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
NDEL1-209ENST00000580738 XAGE1AQ9HD64 81 aa11.09□□□□□ -0.63
NDEL1-209ENST00000580738 FSIP2Q5CZC0 6907 aa11.09□□□□□ -0.63
NDEL1-209ENST00000580738 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
NDEL1-209ENST00000580738 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
NDEL1-209ENST00000580738 ZNF727A8MUV8 499 aa11.08□□□□□ -0.64
NDEL1-209ENST00000580738 BCE1O60756 84 aa11.08□□□□□ -0.64
NDEL1-209ENST00000580738 RPL32P62910 135 aaKnown RBP11.08□□□□□ -0.64
NDEL1-209ENST00000580738 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
NDEL1-209ENST00000580738 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
NDEL1-209ENST00000580738 TCAPO15273 167 aa11.07□□□□□ -0.64
NDEL1-209ENST00000580738 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
NDEL1-209ENST00000580738 BATF3Q9NR55 127 aa11.07□□□□□ -0.64
NDEL1-209ENST00000580738 CRCT1Q9UGL9 99 aa11.07□□□□□ -0.64
NDEL1-209ENST00000580738 V9GYV3 84 aa11.07□□□□□ -0.64
NDEL1-209ENST00000580738 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
NDEL1-209ENST00000580738 CKS2P33552 79 aa11.06□□□□□ -0.64
NDEL1-209ENST00000580738 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
NDEL1-209ENST00000580738 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
NDEL1-209ENST00000580738 LINC00304Q8N9R0 145 aa11.05□□□□□ -0.64
NDEL1-209ENST00000580738 SMIM7Q9BQ49 75 aa11.05□□□□□ -0.64
NDEL1-209ENST00000580738 MRPL55Q7Z7F7 128 aaKnown RBP11.04□□□□□ -0.64
NDEL1-209ENST00000580738 SLC51BQ86UW2 128 aa11.04□□□□□ -0.64
NDEL1-209ENST00000580738 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
NDEL1-209ENST00000580738 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
NDEL1-209ENST00000580738 TOMM7Q9P0U1 55 aa11.02□□□□□ -0.65
NDEL1-209ENST00000580738 TP73-AS1Q9UF72 201 aa11.02□□□□□ -0.65
NDEL1-209ENST00000580738 NAT8BQ9UHF3 227 aa11.02□□□□□ -0.65
NDEL1-209ENST00000580738 D6R8Y8 96 aa11.01□□□□□ -0.65
NDEL1-209ENST00000580738 NPYP01303 97 aa11.01□□□□□ -0.65
NDEL1-209ENST00000580738 IFI27P40305 119 aaPredicted RBP11.01□□□□□ -0.65
NDEL1-209ENST00000580738 CKS1BP61024 79 aa11.01□□□□□ -0.65
NDEL1-209ENST00000580738 PRSS2P07478 247 aa11□□□□□ -0.65
NDEL1-209ENST00000580738 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
NDEL1-209ENST00000580738 PYGO1Q9Y3Y4 419 aa11□□□□□ -0.65
NDEL1-209ENST00000580738 C6orf226Q5I0X4 101 aa10.99□□□□□ -0.65
NDEL1-209ENST00000580738 ZC2HC1BQ5TFG8 222 aa10.99□□□□□ -0.65
NDEL1-209ENST00000580738 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
NDEL1-209ENST00000580738 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
NDEL1-209ENST00000580738 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
NDEL1-209ENST00000580738 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
NDEL1-209ENST00000580738 FAM74A3Q4VXF1 159 aa10.98□□□□□ -0.65
NDEL1-209ENST00000580738 KRTAP13-1Q8IUC0 172 aa10.98□□□□□ -0.65
NDEL1-209ENST00000580738 GAGE10A6NGK3 116 aa10.97□□□□□ -0.65
NDEL1-209ENST00000580738 LINC01547P58512 204 aaPredicted RBP10.97□□□□□ -0.65
NDEL1-209ENST00000580738 Q6ZN92 141 aa10.97□□□□□ -0.65
NDEL1-209ENST00000580738 EIF5A2Q9GZV4 153 aaKnown RBP10.97□□□□□ -0.65
NDEL1-209ENST00000580738 BLOC1S1P78537 153 aa10.96□□□□□ -0.65
NDEL1-209ENST00000580738 TEX43Q6ZNM6 134 aa10.96□□□□□ -0.65
NDEL1-209ENST00000580738 Q8IZM0 81 aa10.96□□□□□ -0.65
NDEL1-209ENST00000580738 SMIM27A0A1W2PRY6 76 aa10.95□□□□□ -0.66
NDEL1-209ENST00000580738 RAB5AP20339 215 aa10.95□□□□□ -0.66
NDEL1-209ENST00000580738 ALKAL2Q6UX46 152 aa10.95□□□□□ -0.66
NDEL1-209ENST00000580738 ALKBH7Q9BT30 221 aaPredicted RBP10.95□□□□□ -0.66
NDEL1-209ENST00000580738 IGKV2D-26A0A0A0MRZ7 120 aa10.94□□□□□ -0.66
NDEL1-209ENST00000580738 UBE2AP49459 152 aa10.94□□□□□ -0.66
NDEL1-209ENST00000580738 A0A1B0GW15 77 aa10.93□□□□□ -0.66
NDEL1-209ENST00000580738 SRP19P09132 144 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms